miRNEST 2.0, an integrative microRNA resource :: BLAST
>42480_ssp-MIR444c:mirbase
Length = 108
Score = 208 bits (105), Expect = 7e-55
Identities = 107/108 (99%)
Strand = Plus / Plus
Query: 11 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatac 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatac 60
Query: 71 cgataattttcttgcangttgtgcagttgttgtctcaagcttgctgcc 118
|||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 cgataattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108
>42086_osa-MIR444c:mirbase
Length = 138
Score = 153 bits (77), Expect = 4e-38
Identities = 103/112 (91%)
Strand = Plus / Plus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgata 75
|||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 22 caagctagagacagcaactgcatatcttgcaagaaaatcggttttatggccataccgatg 81
Query: 76 attttcttgcangttgtgcagttgttgtctcaagcttgctgcctccctttgc 127
||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 82 attttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccctttgc 133
Score = 46.1 bits (23), Expect = 6e-06
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 76 attttcttgcangttgtgcagttgttgtctcaagcttgctgcctcc 121
||||||||||| | | |||||||| |||||| ||||||| ||||||
Sbjct: 59 attttcttgcaagatatgcagttgctgtctctagcttgccgcctcc 14
>42085_osa-MIR444c:mirbase
Length = 138
Score = 153 bits (77), Expect = 4e-38
Identities = 103/112 (91%)
Strand = Plus / Plus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgata 75
|||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 22 caagctagagacagcaactgcatatcttgcaagaaaatcggttttatggccataccgatg 81
Query: 76 attttcttgcangttgtgcagttgttgtctcaagcttgctgcctccctttgc 127
||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 82 attttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccctttgc 133
Score = 46.1 bits (23), Expect = 6e-06
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 76 attttcttgcangttgtgcagttgttgtctcaagcttgctgcctcc 121
||||||||||| | | |||||||| |||||| ||||||| ||||||
Sbjct: 59 attttcttgcaagatatgcagttgctgtctctagcttgccgcctcc 14
>42084_osa-MIR444b:mirbase
Length = 138
Score = 135 bits (68), Expect = 9e-33
Identities = 118/134 (88%), Gaps = 7/134 (5%)
Strand = Plus / Plus
Query: 1 tgcaagggg-tggtgacaagctagaggcagcaactgcatatcttgcaagaaaatt----- 54
||||||||| |||||||||||| | ||||||||||||| |||||||||||||||
Sbjct: 2 tgcaaggggatggtgacaagcttgtggcagcaactgcacatcttgcaagaaaatctttag 61
Query: 55 -ggttttcgaaccataccgataattttcttgcangttgtgcagttgttgtctcaagcttg 113
| ||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 62 ggtttttcagaccataccgatgattttcttgcaagttgtgcagttgttgtctcaagcttg 121
Query: 114 ctgcctccctttgc 127
||||||||||||||
Sbjct: 122 ctgcctccctttgc 135
>42083_osa-MIR444b:mirbase
Length = 138
Score = 135 bits (68), Expect = 9e-33
Identities = 118/134 (88%), Gaps = 7/134 (5%)
Strand = Plus / Plus
Query: 1 tgcaagggg-tggtgacaagctagaggcagcaactgcatatcttgcaagaaaatt----- 54
||||||||| |||||||||||| | ||||||||||||| |||||||||||||||
Sbjct: 2 tgcaaggggatggtgacaagcttgtggcagcaactgcacatcttgcaagaaaatctttag 61
Query: 55 -ggttttcgaaccataccgataattttcttgcangttgtgcagttgttgtctcaagcttg 113
| ||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 62 ggtttttcagaccataccgatgattttcttgcaagttgtgcagttgttgtctcaagcttg 121
Query: 114 ctgcctccctttgc 127
||||||||||||||
Sbjct: 122 ctgcctccctttgc 135
>42091_osa-MIR444f:mirbase
Length = 154
Score = 73.8 bits (37), Expect = 3e-14
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagcttgctgcctcc 121
||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 110 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaa 51
|||||| |||||| |||||||| | |||||||||||
Sbjct: 145 caagcttgaggcaacaactgcacaacttgcaagaaa 110
>42089_osa-MIR444d:mirbase
Length = 143
Score = 69.9 bits (35), Expect = 4e-13
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagcttgctgcctccct 123
||||||||| |||||||||||| || ||||||||||||||||||||
Sbjct: 89 tttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccct 134
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaa 51
|||||| ||||||||||||||| | |||||||||||
Sbjct: 124 caagcttgaggcagcaactgcacaacttgcaagaaa 89
>42088_osa-MIR444d:mirbase
Length = 143
Score = 69.9 bits (35), Expect = 4e-13
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagcttgctgcctccct 123
||||||||| |||||||||||| || ||||||||||||||||||||
Sbjct: 89 tttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccct 134
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaa 51
|||||| ||||||||||||||| | |||||||||||
Sbjct: 124 caagcttgaggcagcaactgcacaacttgcaagaaa 89
>42087_osa-MIR444d:mirbase
Length = 143
Score = 69.9 bits (35), Expect = 4e-13
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagcttgctgcctccct 123
||||||||| |||||||||||| || ||||||||||||||||||||
Sbjct: 89 tttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccct 134
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaa 51
|||||| ||||||||||||||| | |||||||||||
Sbjct: 124 caagcttgaggcagcaactgcacaacttgcaagaaa 89
>42082_osa-MIR444a:mirbase
Length = 131
Score = 65.9 bits (33), Expect = 7e-12
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 66 cataccgataattttcttgcangttgtgcagttgttgtctcaagcttgctgcctcc 121
||||||||| || |||||||| ||| |||||||| || ||||||||||||||||||
Sbjct: 68 cataccgatgatattcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaa 50
|||||| ||||||||||||||||| ||||||||||
Sbjct: 115 caagcttgaggcagcaactgcataacttgcaagaa 81
>42081_osa-MIR444a:mirbase
Length = 131
Score = 65.9 bits (33), Expect = 7e-12
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 66 cataccgataattttcttgcangttgtgcagttgttgtctcaagcttgctgcctcc 121
||||||||| || |||||||| ||| |||||||| || ||||||||||||||||||
Sbjct: 68 cataccgatgatattcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaa 50
|||||| ||||||||||||||||| ||||||||||
Sbjct: 115 caagcttgaggcagcaactgcataacttgcaagaa 81
>41894_hvu-MIR444b:mirbase
Length = 121
Score = 65.9 bits (33), Expect = 7e-12
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagcttgctgcctcc 121
||||||||| |||||||||||| |||||||||||||||| ||||
Sbjct: 78 tttcttgcaagttgtgcagttgctgtctcaagcttgctgactcc 121
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaa 51
|||||| ||| ||||||||||| | |||||||||||
Sbjct: 113 caagcttgagacagcaactgcacaacttgcaagaaa 78
>42648_tae-MIR444:mirbase
Length = 426
Score = 61.9 bits (31), Expect = 1e-10
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagcttgctgcctccctttgc 127
||||||||| || |||||||| || ||||||||||||||||||||||||
Sbjct: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcctccctttgc 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaa 51
|||||| |||||||||||||||| |||||||||||
Sbjct: 169 caagcttgaggcagcaactgcatgacttgcaagaaa 134
>42478_ssp-MIR444a:mirbase
Length = 105
Score = 60.0 bits (30), Expect = 4e-10
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 77 ttttcttgcangttgtgcagttgttgtctcaagcttg 113
|||||||||| ||||||||||||||| ||||||||||
Sbjct: 69 ttttcttgcaagttgtgcagttgttgcctcaagcttg 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaaa 52
|||||| |||||| |||||||| | ||||||||||||
Sbjct: 105 caagcttgaggcaacaactgcacaacttgcaagaaaa 69
>42649_tae-MIR444b:mirbase
Length = 162
Score = 58.0 bits (29), Expect = 2e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagcttgctgcctcc 121
||||||||| || ||||||||| || ||||||||||||||||||
Sbjct: 110 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaa 51
|||||| ||||||||||||||| |||||||||||
Sbjct: 145 caagcttgaggcagcaactgcacgacttgcaagaaa 110
>42479_ssp-MIR444b:mirbase
Length = 106
Score = 58.0 bits (29), Expect = 2e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagcttg 113
||||||||| ||||||||||||||| ||||||||||
Sbjct: 71 tttcttgcaagttgtgcagttgttgcctcaagcttg 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaa 51
|||||| |||||| |||||||| | |||||||||||
Sbjct: 106 caagcttgaggcaacaactgcacaacttgcaagaaa 71
>41893_hvu-MIR444a:mirbase
Length = 114
Score = 54.0 bits (27), Expect = 3e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagcttgctgcct 119
||||||||| || ||||||||| || ||||||||||||||||
Sbjct: 73 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcct 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaa 51
|||||| ||||||||||||||| |||||||||||
Sbjct: 108 caagcttgaggcagcaactgcacgacttgcaagaaa 73
>42090_osa-MIR444e:mirbase
Length = 140
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 17 aagctagaggcagcaactgcatatcttgcaagaaa 51
|||||||||||| |||||||||| ||||| |||||
Sbjct: 22 aagctagaggcaccaactgcataacttgcgagaaa 56
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 17 aagctagaggcagcaactgcatatcttgc 45
||||| ||||||||||||||||| |||||
Sbjct: 119 aagcttgaggcagcaactgcataacttgc 91
>41805_bdi-MIR444:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcata 39
|||||| |||||||||||||||||
Sbjct: 106 caagcttgaggcagcaactgcata 83
