miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42479_ssp-MIR444b:mirbase
          Length = 106

 Score =  210 bits (106), Expect = 2e-55
 Identities = 106/106 (100%)
 Strand = Plus / Plus

                                                                       
Query: 19  caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaggatca 78
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaggatca 60

                                                         
Query: 79  tacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttg 124
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttg 106




>42478_ssp-MIR444a:mirbase
          Length = 105

 Score =  186 bits (94), Expect = 3e-48
 Identities = 104/106 (98%), Gaps = 1/106 (0%)
 Strand = Plus / Plus

                                                                       
Query: 19  caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaggatca 78
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1   caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcagga-ca 59

                                                         
Query: 79  tacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttg 124
           ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 60  tacttgtggttttcttgcaagttgtgcagttgttgcctcaagcttg 105




>42089_osa-MIR444d:mirbase
          Length = 143

 Score =  168 bits (85), Expect = 7e-43
 Identities = 128/140 (91%), Gaps = 3/140 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   tattgcatatggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcaca 60
           ||||||| |||||||||||||||||||||||  |||||||||||||||||||||| ||||
Sbjct: 4   tattgcacatggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcaca 63

                                                                       
Query: 61  aaatcaattgcaggatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaag 120
           |||||| | | | |||  |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 64  aaatcattag-atgat--tacttgtggctttcttgcaagttgtgcagttgctgcctcaag 120

                               
Query: 121 cttgctgcctccctttgcca 140
           |||||||||||||| |||||
Sbjct: 121 cttgctgcctccctctgcca 140



 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 82  ttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 129
           ||||| |||||||||||||  |||||||||||||||| ||||| ||||
Sbjct: 64  ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 14  ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 61
           |||| ||||| |||||||| |||||||  ||||||||||||| |||||
Sbjct: 129 ggcagcaagcttgaggcagcaactgcacaacttgcaagaaagccacaa 82




>42088_osa-MIR444d:mirbase
          Length = 143

 Score =  168 bits (85), Expect = 7e-43
 Identities = 128/140 (91%), Gaps = 3/140 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   tattgcatatggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcaca 60
           ||||||| |||||||||||||||||||||||  |||||||||||||||||||||| ||||
Sbjct: 4   tattgcacatggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcaca 63

                                                                       
Query: 61  aaatcaattgcaggatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaag 120
           |||||| | | | |||  |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 64  aaatcattag-atgat--tacttgtggctttcttgcaagttgtgcagttgctgcctcaag 120

                               
Query: 121 cttgctgcctccctttgcca 140
           |||||||||||||| |||||
Sbjct: 121 cttgctgcctccctctgcca 140



 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 82  ttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 129
           ||||| |||||||||||||  |||||||||||||||| ||||| ||||
Sbjct: 64  ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 14  ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 61
           |||| ||||| |||||||| |||||||  ||||||||||||| |||||
Sbjct: 129 ggcagcaagcttgaggcagcaactgcacaacttgcaagaaagccacaa 82




>42087_osa-MIR444d:mirbase
          Length = 143

 Score =  168 bits (85), Expect = 7e-43
 Identities = 128/140 (91%), Gaps = 3/140 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   tattgcatatggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcaca 60
           ||||||| |||||||||||||||||||||||  |||||||||||||||||||||| ||||
Sbjct: 4   tattgcacatggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcaca 63

                                                                       
Query: 61  aaatcaattgcaggatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaag 120
           |||||| | | | |||  |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 64  aaatcattag-atgat--tacttgtggctttcttgcaagttgtgcagttgctgcctcaag 120

                               
Query: 121 cttgctgcctccctttgcca 140
           |||||||||||||| |||||
Sbjct: 121 cttgctgcctccctctgcca 140



 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 82  ttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 129
           ||||| |||||||||||||  |||||||||||||||| ||||| ||||
Sbjct: 64  ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 14  ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 61
           |||| ||||| |||||||| |||||||  ||||||||||||| |||||
Sbjct: 129 ggcagcaagcttgaggcagcaactgcacaacttgcaagaaagccacaa 82




>42648_tae-MIR444:mirbase
          Length = 426

 Score =  103 bits (52), Expect = 3e-23
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                       
Query: 77  catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcccttt 136
           ||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||
Sbjct: 122 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagcttgctgcctcccttt 181

               
Query: 137 gcca 140
           ||||
Sbjct: 182 gcca 185



 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 14  ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 61
           |||| ||||| |||||||| |||||||| ||||||||||||| |||||
Sbjct: 174 ggcagcaagcttgaggcagcaactgcatgacttgcaagaaagccacaa 127



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                       
Query: 4  tgcatatggtggcaccaagcatgaggcaggaactgcattacttgc 48
          ||||| ||| |||||| |||||||||||  |||||||||||||||
Sbjct: 12 tgcatgtggcggcaccgagcatgaggcaacaactgcattacttgc 56




>42649_tae-MIR444b:mirbase
          Length = 162

 Score = 95.6 bits (48), Expect = 8e-21
 Identities = 54/56 (96%)
 Strand = Plus / Plus

                                                                   
Query: 77  catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 132
           |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 98  catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 153



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                       
Query: 4  tgcatatggtggcaccaagcatgaggcaggaactgcattacttgc 48
          ||||| ||| |||||| |||||||||||  |||||||||||||||
Sbjct: 5  tgcatgtggcggcaccgagcatgaggcaacaactgcattacttgc 49



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 14  ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 61
           |||| ||||| |||||||| |||||||  ||||||||||||| |||||
Sbjct: 150 ggcagcaagcttgaggcagcaactgcacgacttgcaagaaagccacaa 103




>42084_osa-MIR444b:mirbase
          Length = 138

 Score = 95.6 bits (48), Expect = 8e-21
 Identities = 51/52 (98%)
 Strand = Plus / Plus

                                                               
Query: 89  tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctccctttgcca 140
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 86  tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccctttgcca 137



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 89  tttcttgcaagttgtgcagttgttgcctcaagcttg 124
           ||||||||||| |||||||||| |||| ||||||||
Sbjct: 53  tttcttgcaagatgtgcagttgctgccacaagcttg 18




>42083_osa-MIR444b:mirbase
          Length = 138

 Score = 95.6 bits (48), Expect = 8e-21
 Identities = 51/52 (98%)
 Strand = Plus / Plus

                                                               
Query: 89  tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctccctttgcca 140
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 86  tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccctttgcca 137



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 89  tttcttgcaagttgtgcagttgttgcctcaagcttg 124
           ||||||||||| |||||||||| |||| ||||||||
Sbjct: 53  tttcttgcaagatgtgcagttgctgccacaagcttg 18




>41894_hvu-MIR444b:mirbase
          Length = 121

 Score = 91.7 bits (46), Expect = 1e-19
 Identities = 104/122 (85%), Gaps = 1/122 (0%)
 Strand = Plus / Plus

                                                                       
Query: 11  ggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattg 70
           |||||||||||||||||||||  ||||||||||||| |||| |||| |||||||| | ||
Sbjct: 1   ggtggcaccaagcatgaggcaacaactgcattactttcaaggaagttacaaaatcta-tg 59

                                                                       
Query: 71  caggatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcct 130
                ||||| | ||| ||||||||||||||||||||||| || ||||||||||||| ||
Sbjct: 60  ggtcttcataatcgtgactttcttgcaagttgtgcagttgctgtctcaagcttgctgact 119

             
Query: 131 cc 132
           ||
Sbjct: 120 cc 121



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 19  caagcatgaggcaggaactgcattacttgcaagaaagtcac 59
           ||||| |||| ||| |||||||  |||||||||||||||||
Sbjct: 113 caagcttgagacagcaactgcacaacttgcaagaaagtcac 73




>41893_hvu-MIR444a:mirbase
          Length = 114

 Score = 91.7 bits (46), Expect = 1e-19
 Identities = 52/54 (96%)
 Strand = Plus / Plus

                                                                 
Query: 77  catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcct 130
           |||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 61  catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcct 114



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 14  ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 61
           |||| ||||| |||||||| |||||||  ||||||||||||| |||||
Sbjct: 113 ggcagcaagcttgaggcagcaactgcacgacttgcaagaaagccacaa 66




>42091_osa-MIR444f:mirbase
          Length = 154

 Score = 89.7 bits (45), Expect = 5e-19
 Identities = 45/45 (100%)
 Strand = Plus / Plus

                                                        
Query: 88  ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 132
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 153



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                     
Query: 9  atggtggcaccaagcatgaggcaggaactgcattacttgcaag 51
          |||||||||||||||||||||    ||||||||||||||||||
Sbjct: 1  atggtggcaccaagcatgaggttacaactgcattacttgcaag 43



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 14  ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtca 58
           |||| ||||| |||||||  |||||||  ||||||||||||||||
Sbjct: 150 ggcagcaagcttgaggcaacaactgcacaacttgcaagaaagtca 106




>42086_osa-MIR444c:mirbase
          Length = 138

 Score = 89.7 bits (45), Expect = 5e-19
 Identities = 51/53 (96%)
 Strand = Plus / Plus

                                                                
Query: 89  tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctccctttgccag 141
           ||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 84  tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccctttgccag 136



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 89  tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 132
           ||||||||||| | |||||||| || ||| ||||||| ||||||
Sbjct: 57  tttcttgcaagatatgcagttgctgtctctagcttgccgcctcc 14




>42085_osa-MIR444c:mirbase
          Length = 138

 Score = 89.7 bits (45), Expect = 5e-19
 Identities = 51/53 (96%)
 Strand = Plus / Plus

                                                                
Query: 89  tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctccctttgccag 141
           ||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 84  tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccctttgccag 136



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 89  tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 132
           ||||||||||| | |||||||| || ||| ||||||| ||||||
Sbjct: 57  tttcttgcaagatatgcagttgctgtctctagcttgccgcctcc 14




>42480_ssp-MIR444c:mirbase
          Length = 108

 Score = 73.8 bits (37), Expect = 3e-14
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                    
Query: 89  tttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 129
           ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 68  tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 89  tttcttgcaagttgtgcagttgttgcctcaagcttg 124
           ||||||||||| | |||||||| |||||| ||||||
Sbjct: 41  tttcttgcaagatatgcagttgctgcctctagcttg 6




>42082_osa-MIR444a:mirbase
          Length = 131

 Score = 69.9 bits (35), Expect = 5e-13
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                      
Query: 90  ttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 132
           |||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 81  ttcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 14  ggcaccaagcatgaggcaggaactgcattacttgcaagaa 53
           |||| ||||| |||||||| |||||||| |||||||||||
Sbjct: 120 ggcagcaagcttgaggcagcaactgcataacttgcaagaa 81




>42081_osa-MIR444a:mirbase
          Length = 131

 Score = 69.9 bits (35), Expect = 5e-13
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                      
Query: 90  ttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 132
           |||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 81  ttcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 14  ggcaccaagcatgaggcaggaactgcattacttgcaagaa 53
           |||| ||||| |||||||| |||||||| |||||||||||
Sbjct: 120 ggcagcaagcttgaggcagcaactgcataacttgcaagaa 81




>42090_osa-MIR444e:mirbase
          Length = 140

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 95  gcaagttgtgcagttgttgcctcaagcttgctgcct 130
           ||||||| |||||||| |||||||||||| ||||||
Sbjct: 91  gcaagttatgcagttgctgcctcaagcttactgcct 126




>41805_bdi-MIR444:mirbase
          Length = 110

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 97  aagttgtgcagttgttgcctcaagcttgctgc 128
           ||||| |||||||| |||||||||||||||||
Sbjct: 79  aagttatgcagttgctgcctcaagcttgctgc 110