miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34252_dre-mir-31:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 18 atggcaagatgttggcatagctgtt 42
|||||||||||||||||||||||||
Sbjct: 7 atggcaagatgttggcatagctgtt 31
>34869_sko-mir-31:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 ggcaagatgttggcatagctgttt 43
||||||||||||||||||||||||
Sbjct: 22 ggcaagatgttggcatagctgttt 45
>25738_xtr-mir-31:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 ggcaagatgttggcatagctgtt 42
|||||||||||||||||||||||
Sbjct: 18 ggcaagatgttggcatagctgtt 40
>25922_gga-mir-31:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 ggcaagatgttggcatagctgtt 42
|||||||||||||||||||||||
Sbjct: 26 ggcaagatgttggcatagctgtt 48
>26429_tgu-mir-31:mirbase
Length = 109
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 ggcaagatgttggcatagctgtt 42
|||||||||||||||||||||||
Sbjct: 26 ggcaagatgttggcatagctgtt 48
>27357_mdo-mir-31:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 ggcaagatgttggcatagctgtt 42
|||||||||||||||||||||||
Sbjct: 13 ggcaagatgttggcatagctgtt 35
>31456_oan-mir-31:mirbase
Length = 136
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 ggcaagatgttggcatagctgtt 42
|||||||||||||||||||||||
Sbjct: 18 ggcaagatgttggcatagctgtt 40
>34813_spu-mir-31:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 gaaatggcaagatgttggcatagctgt 41
|||| ||||||||||||||||||||||
Sbjct: 15 gaaaaggcaagatgttggcatagctgt 41
>24814_cin-mir-31:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 atggcaagatgttggcatagct 39
||||||||||||||||||||||
Sbjct: 15 atggcaagatgttggcatagct 36
>25319_csa-mir-31:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 atggcaagatgttggcatagct 39
||||||||||||||||||||||
Sbjct: 15 atggcaagatgttggcatagct 36
>35182_aae-mir-31:mirbase
Length = 149
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tggcaagatgttggcatagctg 40
||||||||||||||||||||||
Sbjct: 51 tggcaagatgttggcatagctg 72
>36013_cqu-mir-31:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tggcaagatgttggcatagctg 40
||||||||||||||||||||||
Sbjct: 12 tggcaagatgttggcatagctg 33
>38856_lgi-mir-31:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 ggcaagatgttggcatagctg 40
|||||||||||||||||||||
Sbjct: 22 ggcaagatgttggcatagctg 42
>38737_cte-mir-31:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 ggcaagatgttggcatagctg 40
|||||||||||||||||||||
Sbjct: 22 ggcaagatgttggcatagctg 42
>38622_ppc-mir-72:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 ggcaagatgttggcatagctg 40
|||||||||||||||||||||
Sbjct: 25 ggcaagatgttggcatagctg 45
>38534_crm-mir-72:mirbase
Length = 113
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 ggcaagatgttggcatagctg 40
|||||||||||||||||||||
Sbjct: 22 ggcaagatgttggcatagctg 42
>38106_bma-mir-72:mirbase
Length = 115
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 ggcaagatgttggcatagctg 40
|||||||||||||||||||||
Sbjct: 19 ggcaagatgttggcatagctg 39
>38308_cel-mir-72:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 ggcaagatgttggcatagctg 40
|||||||||||||||||||||
Sbjct: 18 ggcaagatgttggcatagctg 38
