miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34264_dre-mir-100-2:mirbase
Length = 75
Score = 69.9 bits (35), Expect = 3e-13
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 12 gctgccataaacccgtagatccgaacttgtgttgcttcagttcacaagctcgtgtctat 70
||||||| ||||||||||||||||||||||| || || || |||||||||||||||||
Sbjct: 2 gctgccacaaacccgtagatccgaacttgtggtgtctctgtgcacaagctcgtgtctat 60
>25755_xtr-mir-100:mirbase
Length = 76
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 14 tgccataaacccgtagatccgaacttgtg 42
|||||||||||||||||||||||||||||
Sbjct: 3 tgccataaacccgtagatccgaacttgtg 31
>31827_mmu-mir-100:mirbase
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 14 tgccataaacccgtagatccgaacttgtgttgcttcagttcacaagctcgtgtctat 70
||||| ||||||||||||||||||||||| || ||| | |||||||| ||||||||
Sbjct: 6 tgccacaaacccgtagatccgaacttgtgctgattctgcacacaagcttgtgtctat 62
>26440_tgu-mir-100-1:mirbase
Length = 111
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 12 gctgccataaacccgtagatccgaacttgtg 42
||||||| |||||||||||||||||||||||
Sbjct: 2 gctgccacaaacccgtagatccgaacttgtg 32
>26441_tgu-mir-100-2:mirbase
Length = 111
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 12 gctgccataaacccgtagatccgaacttgtg 42
||||||| |||||||||||||||||||||||
Sbjct: 2 gctgccacaaacccgtagatccgaacttgtg 32
>34877_sko-mir-100:mirbase
Length = 101
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 taaacccgtagatccgaacttgtgtt 44
||||||||||||||||||||||||||
Sbjct: 19 taaacccgtagatccgaacttgtgtt 44
>38866_lgi-mir-100:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 18 ataaacccgtagatccgaacttgtg 42
|||||||||||||||||||||||||
Sbjct: 18 ataaacccgtagatccgaacttgtg 42
>25929_gga-mir-99a:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 17 cataaacccgtagatccgaacttgtgttg 45
||||||||||||||||||| |||||||||
Sbjct: 9 cataaacccgtagatccgatcttgtgttg 37
>25930_gga-mir-100:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 tgccataaacccgtagatccgaacttgtg 42
||||| |||||||||||||||||||||||
Sbjct: 6 tgccacaaacccgtagatccgaacttgtg 34
>26439_tgu-mir-99-2:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 17 cataaacccgtagatccgaacttgtgttg 45
||||||||||||||||||| |||||||||
Sbjct: 7 cataaacccgtagatccgatcttgtgttg 35
>26438_tgu-mir-99-1:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 17 cataaacccgtagatccgaacttgtgttg 45
||||||||||||||||||| |||||||||
Sbjct: 7 cataaacccgtagatccgatcttgtgttg 35
>27364_mdo-mir-100:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 tgccataaacccgtagatccgaacttgtg 42
||||| |||||||||||||||||||||||
Sbjct: 6 tgccacaaacccgtagatccgaacttgtg 34
>27501_age-mir-100:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 tgccataaacccgtagatccgaacttgtg 42
||||| |||||||||||||||||||||||
Sbjct: 6 tgccacaaacccgtagatccgaacttgtg 34
>27563_lla-mir-100:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 tgccataaacccgtagatccgaacttgtg 42
||||| |||||||||||||||||||||||
Sbjct: 6 tgccacaaacccgtagatccgaacttgtg 34
>27610_sla-mir-100:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 tgccataaacccgtagatccgaacttgtg 42
||||| |||||||||||||||||||||||
Sbjct: 6 tgccacaaacccgtagatccgaacttgtg 34
>27704_mml-mir-100:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 tgccataaacccgtagatccgaacttgtg 42
||||| |||||||||||||||||||||||
Sbjct: 6 tgccacaaacccgtagatccgaacttgtg 34
>28293_ggo-mir-100:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 tgccataaacccgtagatccgaacttgtg 42
||||| |||||||||||||||||||||||
Sbjct: 6 tgccacaaacccgtagatccgaacttgtg 34
>28414_hsa-mir-100:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 tgccataaacccgtagatccgaacttgtg 42
||||| |||||||||||||||||||||||
Sbjct: 6 tgccacaaacccgtagatccgaacttgtg 34
>30080_ppa-mir-100:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 tgccataaacccgtagatccgaacttgtg 42
||||| |||||||||||||||||||||||
Sbjct: 6 tgccacaaacccgtagatccgaacttgtg 34
>30198_ptr-mir-100:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 tgccataaacccgtagatccgaacttgtg 42
||||| |||||||||||||||||||||||
Sbjct: 6 tgccacaaacccgtagatccgaacttgtg 34
>30803_ppy-mir-100:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 tgccataaacccgtagatccgaacttgtg 42
||||| |||||||||||||||||||||||
Sbjct: 6 tgccacaaacccgtagatccgaacttgtg 34
>31471_oan-mir-100:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 tgccataaacccgtagatccgaacttgtg 42
||||| |||||||||||||||||||||||
Sbjct: 7 tgccacaaacccgtagatccgaacttgtg 35
>32708_rno-mir-100:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 tgccataaacccgtagatccgaacttgtg 42
||||| |||||||||||||||||||||||
Sbjct: 6 tgccacaaacccgtagatccgaacttgtg 34
>33187_bta-mir-100:mirbase
Length = 76
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 tgccataaacccgtagatccgaacttgtg 42
||||| |||||||||||||||||||||||
Sbjct: 6 tgccacaaacccgtagatccgaacttgtg 34
>33958_ssc-mir-100:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 tgccataaacccgtagatccgaacttgtg 42
||||| |||||||||||||||||||||||
Sbjct: 9 tgccacaaacccgtagatccgaacttgtg 37
>38112_bma-mir-100b:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 aacccgtagatccgaacttgtgttg 45
|||||||||||||||||||||||||
Sbjct: 21 aacccgtagatccgaacttgtgttg 45
>25468_pma-mir-100a:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 15 gccataaacccgtagatccgaacttgtg 42
|||| |||||||||||||||||||||||
Sbjct: 11 gccacaaacccgtagatccgaacttgtg 38
>25470_pma-mir-100c:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 15 gccataaacccgtagatccgaacttgtg 42
|||| |||||||||||||||||||||||
Sbjct: 76 gccacaaacccgtagatccgaacttgtg 49
>34263_dre-mir-100-1:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 aaacccgtagatccgaacttgtg 42
|||||||||||||||||||||||
Sbjct: 23 aaacccgtagatccgaacttgtg 45
>34579_fru-mir-100:mirbase
Length = 63
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 aaacccgtagatccgaacttgtg 42
|||||||||||||||||||||||
Sbjct: 4 aaacccgtagatccgaacttgtg 26
>34726_tni-mir-100:mirbase
Length = 63
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 aaacccgtagatccgaacttgtg 42
|||||||||||||||||||||||
Sbjct: 4 aaacccgtagatccgaacttgtg 26
>34970_isc-mir-100:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 aacccgtagatccgaacttgtgt 43
|||||||||||||||||||||||
Sbjct: 21 aacccgtagatccgaacttgtgt 43
>35010_dpu-mir-100:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 aacccgtagatccgaacttgtgt 43
|||||||||||||||||||||||
Sbjct: 21 aacccgtagatccgaacttgtgt 43
>35288_aga-mir-100:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 aaacccgtagatccgaacttgtg 42
|||||||||||||||||||||||
Sbjct: 14 aaacccgtagatccgaacttgtg 36
>25754_xtr-mir-99:mirbase
Length = 71
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 cataaacccgtagatccgaacttgtg 42
||||||||||||||||||| ||||||
Sbjct: 4 cataaacccgtagatccgatcttgtg 29
>26995_eca-mir-99a-2:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 cataaacccgtagatccgaacttgtg 42
||||||||||||||||||| ||||||
Sbjct: 9 cataaacccgtagatccgatcttgtg 34
>26997_eca-mir-100:mirbase
Length = 55
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 aacccgtagatccgaacttgtg 42
||||||||||||||||||||||
Sbjct: 1 aacccgtagatccgaacttgtg 22
>27562_lla-mir-99a:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 cataaacccgtagatccgaacttgtg 42
||||||||||||||||||| ||||||
Sbjct: 9 cataaacccgtagatccgatcttgtg 34
>27702_mml-mir-99a:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 cataaacccgtagatccgaacttgtg 42
||||||||||||||||||| ||||||
Sbjct: 9 cataaacccgtagatccgatcttgtg 34
>28201_mne-mir-99a:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 cataaacccgtagatccgaacttgtg 42
||||||||||||||||||| ||||||
Sbjct: 9 cataaacccgtagatccgatcttgtg 34
>28292_ggo-mir-99a:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 cataaacccgtagatccgaacttgtg 42
||||||||||||||||||| ||||||
Sbjct: 9 cataaacccgtagatccgatcttgtg 34
>28412_hsa-mir-99a:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 cataaacccgtagatccgaacttgtg 42
||||||||||||||||||| ||||||
Sbjct: 9 cataaacccgtagatccgatcttgtg 34
>30079_ppa-mir-99a:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 cataaacccgtagatccgaacttgtg 42
||||||||||||||||||| ||||||
Sbjct: 9 cataaacccgtagatccgatcttgtg 34
>30196_ptr-mir-99a:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 cataaacccgtagatccgaacttgtg 42
||||||||||||||||||| ||||||
Sbjct: 9 cataaacccgtagatccgatcttgtg 34
>30802_ppy-mir-99a:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 cataaacccgtagatccgaacttgtg 42
||||||||||||||||||| ||||||
Sbjct: 9 cataaacccgtagatccgatcttgtg 34
>31470_oan-mir-99:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 cataaacccgtagatccgaacttgtg 42
||||||||||||||||||| ||||||
Sbjct: 20 cataaacccgtagatccgatcttgtg 45
>31825_mmu-mir-99a:mirbase
Length = 65
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 cataaacccgtagatccgaacttgtg 42
||||||||||||||||||| ||||||
Sbjct: 1 cataaacccgtagatccgatcttgtg 26
>32706_rno-mir-99a:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 cataaacccgtagatccgaacttgtg 42
||||||||||||||||||| ||||||
Sbjct: 9 cataaacccgtagatccgatcttgtg 34
>33185_bta-mir-99a:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 cataaacccgtagatccgaacttgtg 42
||||||||||||||||||| ||||||
Sbjct: 9 cataaacccgtagatccgatcttgtg 34
>33956_ssc-mir-99a:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 cataaacccgtagatccgaacttgtg 42
||||||||||||||||||| ||||||
Sbjct: 8 cataaacccgtagatccgatcttgtg 33
>35062_api-mir-100:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 acccgtagatccgaacttgtgt 43
||||||||||||||||||||||
Sbjct: 22 acccgtagatccgaacttgtgt 43
>35190_aae-mir-100:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 aacccgtagatccgaacttgtg 42
||||||||||||||||||||||
Sbjct: 31 aacccgtagatccgaacttgtg 52
>35366_ame-mir-100:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 aacccgtagatccgaacttgtg 42
||||||||||||||||||||||
Sbjct: 19 aacccgtagatccgaacttgtg 40
>35537_bmo-mir-100:mirbase
Length = 142
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 aacccgtagatccgaacttgtg 42
||||||||||||||||||||||
Sbjct: 21 aacccgtagatccgaacttgtg 42
>36020_cqu-mir-100:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 aacccgtagatccgaacttgtg 42
||||||||||||||||||||||
Sbjct: 23 aacccgtagatccgaacttgtg 44
>37648_nvi-mir-100:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 aacccgtagatccgaacttgtg 42
||||||||||||||||||||||
Sbjct: 19 aacccgtagatccgaacttgtg 40
>37737_tca-mir-100:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 aacccgtagatccgaacttgtg 42
||||||||||||||||||||||
Sbjct: 10 aacccgtagatccgaacttgtg 31
>37738_tca-mir-100:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 aacccgtagatccgaacttgtg 42
||||||||||||||||||||||
Sbjct: 10 aacccgtagatccgaacttgtg 31
>39244_nve-mir-100:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 acccgtagatccgaacttgtg 42
|||||||||||||||||||||
Sbjct: 17 acccgtagatccgaacttgtg 37
