miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25508_pma-mir-183:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 gtctatggcactggtagaattcactg 43
||||||||||||||||||||||||||
Sbjct: 12 gtctatggcactggtagaattcactg 37
>24843_cin-mir-183:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 cggtctatggcactggtagaattcactg 43
|||| |||||||||||||||||||||||
Sbjct: 11 cggtgtatggcactggtagaattcactg 38
>25808_xtr-mir-183:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 19 tatggcactggtagaattcactg 41
>25978_gga-mir-183:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 15 tatggcactggtagaattcactg 37
>26738_cfa-mir-183:mirbase
Length = 62
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 1 tatggcactggtagaattcactg 23
>27064_eca-mir-183:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 6 tatggcactggtagaattcactg 28
>27407_mdo-mir-183:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 15 tatggcactggtagaattcactg 37
>27621_sla-mir-183:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 27 tatggcactggtagaattcactg 49
>27774_mml-mir-183:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 27 tatggcactggtagaattcactg 49
>28224_mne-mir-183:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 27 tatggcactggtagaattcactg 49
>28317_ggo-mir-183:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 27 tatggcactggtagaattcactg 49
>28490_hsa-mir-183:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 27 tatggcactggtagaattcactg 49
>30106_ppa-mir-183:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 27 tatggcactggtagaattcactg 49
>30258_ptr-mir-183:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 27 tatggcactggtagaattcactg 49
>30872_ppy-mir-183:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 24 tatggcactggtagaattcactg 46
>31514_oan-mir-183:mirbase
Length = 131
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 31 tatggcactggtagaattcactg 53
>31899_mmu-mir-183:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 6 tatggcactggtagaattcactg 28
>32769_rno-mir-183:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 27 tatggcactggtagaattcactg 49
>33041_rno-mir-3553:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 81 tatggcactggtagaattcactg 59
>33251_bta-mir-183:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 6 tatggcactggtagaattcactg 28
>34013_ssc-mir-183:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 6 tatggcactggtagaattcactg 28
>34334_dre-mir-183:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 16 tatggcactggtagaattcactg 38
>34615_fru-mir-183:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 6 tatggcactggtagaattcactg 28
>34762_tni-mir-183:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tatggcactggtagaattcactg 43
|||||||||||||||||||||||
Sbjct: 6 tatggcactggtagaattcactg 28
>38756_cte-mir-182:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tggcactggtagaattcactga 44
||||||||||||||||||||||
Sbjct: 23 tggcactggtagaattcactga 44
>38871_lgi-mir-182:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tggcactggtagaattcactg 43
|||||||||||||||||||||
Sbjct: 23 tggcactggtagaattcactg 43
>38872_lgi-mir-183:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 atggcactggtagaattcac 41
||||||||||||||||||||
Sbjct: 22 atggcactggtagaattcac 41
