miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25519_pma-mir-200b:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 56 attcaaatactgcctggtaatgatg 80
|||| ||||||||||||||||||||
Sbjct: 43 attctaatactgcctggtaatgatg 67
>34357_dre-mir-200c:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 aatactgcctggtaatgatgc 81
|||||||||||||||||||||
Sbjct: 52 aatactgcctggtaatgatgc 72
>25332_csa-mir-200:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 aatactgcctggtaatgatg 80
||||||||||||||||||||
Sbjct: 45 aatactgcctggtaatgatg 64
>25821_xtr-mir-200b:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 aatactgcctggtaatgatg 80
||||||||||||||||||||
Sbjct: 54 aatactgcctggtaatgatg 73
>25992_gga-mir-200b:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 aatactgcctggtaatgatg 80
||||||||||||||||||||
Sbjct: 47 aatactgcctggtaatgatg 66
>26499_tgu-mir-200b:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 aatactgcctggtaatgatg 80
||||||||||||||||||||
Sbjct: 42 aatactgcctggtaatgatg 61
>26760_cfa-mir-200b:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 aatactgcctggtaatgatg 80
||||||||||||||||||||
Sbjct: 46 aatactgcctggtaatgatg 65
>27088_eca-mir-200b:mirbase
Length = 69
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 aatactgcctggtaatgatg 80
||||||||||||||||||||
Sbjct: 45 aatactgcctggtaatgatg 64
>27419_mdo-mir-200b:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 aatactgcctggtaatgatg 80
||||||||||||||||||||
Sbjct: 40 aatactgcctggtaatgatg 59
>28519_hsa-mir-200b:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 aatactgcctggtaatgatg 80
||||||||||||||||||||
Sbjct: 58 aatactgcctggtaatgatg 77
>31529_oan-mir-200b:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 aatactgcctggtaatgatg 80
||||||||||||||||||||
Sbjct: 62 aatactgcctggtaatgatg 81
>31924_mmu-mir-200b:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 aatactgcctggtaatgatg 80
||||||||||||||||||||
Sbjct: 46 aatactgcctggtaatgatg 65
>32789_rno-mir-200b:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 aatactgcctggtaatgatg 80
||||||||||||||||||||
Sbjct: 58 aatactgcctggtaatgatg 77
>33279_bta-mir-200b:mirbase
Length = 59
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 aatactgcctggtaatgatg 80
||||||||||||||||||||
Sbjct: 39 aatactgcctggtaatgatg 58
>34356_dre-mir-200b:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 aatactgcctggtaatgatg 80
||||||||||||||||||||
Sbjct: 51 aatactgcctggtaatgatg 70
>34629_fru-mir-200b:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 aatactgcctggtaatgatg 80
||||||||||||||||||||
Sbjct: 51 aatactgcctggtaatgatg 70
>34776_tni-mir-200b:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 aatactgcctggtaatgatg 80
||||||||||||||||||||
Sbjct: 40 aatactgcctggtaatgatg 59
