• Home
• Browse miRNAs
• Deep-seq predictions
• Mirtrons
• miRNA genes
• Degradomes
• Download
• Upload
• Contact

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>34889_sko-mir-200:mirbase
          Length = 101

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 58 ctaatactgtctggtaatgatgtt 81
          ||||||||||||||||||||||||
Sbjct: 60 ctaatactgtctggtaatgatgtt 83

>34830_spu-mir-200:mirbase
          Length = 81

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 58 ctaatactgtctggtaatgatgttg 82
          ||||||||||||||| |||||||||
Sbjct: 46 ctaatactgtctggtgatgatgttg 70