miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>34891_sko-mir-242:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 15 gttgcgtaggcgttgtgcaca 35
          |||||||||||||||||||||
Sbjct: 19 gttgcgtaggcgttgtgcaca 39

>38878_lgi-mir-242:mirbase
          Length = 86

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 16 ttgcgtaggcgttgtgcaca 35
          ||||||||||||||||||||
Sbjct: 17 ttgcgtaggcgttgtgcaca 36

>34833_spu-mir-242:mirbase
          Length = 100

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 16 ttgcgtaggcgttgtgcaca 35
          ||||||||||||||||||||
Sbjct: 20 ttgcgtaggcgttgtgcaca 39