miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38768_cte-mir-252a:mirbase
          Length = 101

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 18 atgctaagtactagtgccgcagg 40
          |||||||||||||||||||||||
Sbjct: 18 atgctaagtactagtgccgcagg 40




>34892_sko-mir-252a:mirbase
          Length = 101

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 ctaagtactagtgccgcagg 40
          ||||||||||||||||||||
Sbjct: 21 ctaagtactagtgccgcagg 40




>35201_aae-mir-252:mirbase
          Length = 71

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 ctaagtactagtgccgcagg 40
          ||||||||||||||||||||
Sbjct: 11 ctaagtactagtgccgcagg 30




>35544_bmo-mir-252:mirbase
          Length = 85

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 ctaagtactagtgccgcagg 40
          ||||||||||||||||||||
Sbjct: 16 ctaagtactagtgccgcagg 35




>36029_cqu-mir-252:mirbase
          Length = 71

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 ctaagtactagtgccgcagg 40
          ||||||||||||||||||||
Sbjct: 11 ctaagtactagtgccgcagg 30




>36403_dme-mir-252:mirbase
          Length = 93

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 ctaagtactagtgccgcagg 40
          ||||||||||||||||||||
Sbjct: 16 ctaagtactagtgccgcagg 35




>36404_dme-mir-252:mirbase
          Length = 93

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 ctaagtactagtgccgcagg 40
          ||||||||||||||||||||
Sbjct: 16 ctaagtactagtgccgcagg 35




>36943_dps-mir-252:mirbase
          Length = 110

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 ctaagtactagtgccgcagg 40
          ||||||||||||||||||||
Sbjct: 21 ctaagtactagtgccgcagg 40




>37229_dsi-mir-252:mirbase
          Length = 116

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 ctaagtactagtgccgcagg 40
          ||||||||||||||||||||
Sbjct: 30 ctaagtactagtgccgcagg 49




>37584_ngi-mir-252:mirbase
          Length = 94

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 ctaagtactagtgccgcagg 40
          ||||||||||||||||||||
Sbjct: 16 ctaagtactagtgccgcagg 35




>37615_nlo-mir-252:mirbase
          Length = 94

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 ctaagtactagtgccgcagg 40
          ||||||||||||||||||||
Sbjct: 16 ctaagtactagtgccgcagg 35




>37657_nvi-mir-252:mirbase
          Length = 101

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 ctaagtactagtgccgcagg 40
          ||||||||||||||||||||
Sbjct: 16 ctaagtactagtgccgcagg 35




>37758_tca-mir-252a:mirbase
          Length = 87

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 ctaagtactagtgccgcagg 40
          ||||||||||||||||||||
Sbjct: 17 ctaagtactagtgccgcagg 36




>37757_tca-mir-252a:mirbase
          Length = 87

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 ctaagtactagtgccgcagg 40
          ||||||||||||||||||||
Sbjct: 17 ctaagtactagtgccgcagg 36