miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25853_xtr-mir-375:mirbase
Length = 70
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 56 aacgttttgttcgttcggctcgcgtta 82
|||||||||||||||||||||||||||
Sbjct: 36 aacgttttgttcgttcggctcgcgtta 62
>26024_gga-mir-375:mirbase
Length = 65
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 56 aacgttttgttcgttcggctcgcgtta 82
|||||||||||||||||||||||||||
Sbjct: 36 aacgttttgttcgttcggctcgcgtta 62
>26528_tgu-mir-375:mirbase
Length = 72
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 56 aacgttttgttcgttcggctcgcgtta 82
|||||||||||||||||||||||||||
Sbjct: 36 aacgttttgttcgttcggctcgcgtta 62
>34651_fru-mir-375:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 59 gttttgttcgttcggctcgcgttat 83
|||||||||||||||||||||||||
Sbjct: 47 gttttgttcgttcggctcgcgttat 71
>34799_tni-mir-375:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 59 gttttgttcgttcggctcgcgttat 83
|||||||||||||||||||||||||
Sbjct: 47 gttttgttcgttcggctcgcgttat 71
>38887_lgi-mir-375:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 gttttgttcgttcggctcgcgtta 82
||||||||||||||||||||||||
Sbjct: 59 gttttgttcgttcggctcgcgtta 82
>25544_pma-mir-375b:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 cgttttgttcgttcggctcgcgtt 81
||||||||||||||||||||||||
Sbjct: 56 cgttttgttcgttcggctcgcgtt 79
>34398_dre-mir-375-1:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 gttttgttcgttcggctcgcgtta 82
||||||||||||||||||||||||
Sbjct: 47 gttttgttcgttcggctcgcgtta 70
>34399_dre-mir-375-2:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 gttttgttcgttcggctcgcgtta 82
||||||||||||||||||||||||
Sbjct: 50 gttttgttcgttcggctcgcgtta 73
>26822_cfa-mir-375:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 cgttttgttcgttcggctcgcgt 80
|||||||||||||||||||||||
Sbjct: 38 cgttttgttcgttcggctcgcgt 60
>27447_mdo-mir-375:mirbase
Length = 63
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 cgttttgttcgttcggctcgcgt 80
|||||||||||||||||||||||
Sbjct: 36 cgttttgttcgttcggctcgcgt 58
>27878_mml-mir-375:mirbase
Length = 64
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 cgttttgttcgttcggctcgcgt 80
|||||||||||||||||||||||
Sbjct: 37 cgttttgttcgttcggctcgcgt 59
>28616_hsa-mir-375:mirbase
Length = 64
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 cgttttgttcgttcggctcgcgt 80
|||||||||||||||||||||||
Sbjct: 37 cgttttgttcgttcggctcgcgt 59
>30352_ptr-mir-375:mirbase
Length = 63
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 cgttttgttcgttcggctcgcgt 80
|||||||||||||||||||||||
Sbjct: 37 cgttttgttcgttcggctcgcgt 59
>30979_ppy-mir-375:mirbase
Length = 64
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 cgttttgttcgttcggctcgcgt 80
|||||||||||||||||||||||
Sbjct: 37 cgttttgttcgttcggctcgcgt 59
>32044_mmu-mir-375:mirbase
Length = 64
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 cgttttgttcgttcggctcgcgt 80
|||||||||||||||||||||||
Sbjct: 37 cgttttgttcgttcggctcgcgt 59
>32888_rno-mir-375:mirbase
Length = 75
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 cgttttgttcgttcggctcgcgt 80
|||||||||||||||||||||||
Sbjct: 42 cgttttgttcgttcggctcgcgt 64
>33347_bta-mir-375:mirbase
Length = 64
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 cgttttgttcgttcggctcgcgt 80
|||||||||||||||||||||||
Sbjct: 37 cgttttgttcgttcggctcgcgt 59
>25543_pma-mir-375a:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 61 tttgttcgttcggctcgcgtta 82
||||||||||||||||||||||
Sbjct: 59 tttgttcgttcggctcgcgtta 80
>34837_spu-mir-375:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 gttttgttcgttcggctcgcgt 80
||||||||||||||||||||||
Sbjct: 59 gttttgttcgttcggctcgcgt 80
>38778_cte-mir-375:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 gttttgttcgttcggctcgcgtta 82
||||||||||| ||||||||||||
Sbjct: 59 gttttgttcgtccggctcgcgtta 82
>34898_sko-mir-375:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 56 aacgttttgttcgttcggctcgcg 79
|||| |||||||||||||||||||
Sbjct: 49 aacgctttgttcgttcggctcgcg 72
>34988_isc-mir-375:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 gttttgttcgttcggctcgcgtta 82
||||||||||||||||||| ||||
Sbjct: 59 gttttgttcgttcggctcgagtta 82
>35396_ame-mir-375:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tttgttcgttcggctcgcgttatc 84
||||||||||||||||| ||||||
Sbjct: 63 tttgttcgttcggctcgagttatc 86
>37593_ngi-mir-375:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tttgttcgttcggctcgcgttatc 84
||||||||||||||||| ||||||
Sbjct: 46 tttgttcgttcggctcgagttatc 69
