miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>24750_bfl-mir-4872c-1:mirbase
          Length = 83

 Score =  133 bits (67), Expect = 2e-32
 Identities = 79/83 (95%)
 Strand = Plus / Plus

                                                                      
Query: 4  ggttcacaagtggtgtcaggacgacaaaagctctgagttctgttaacatcagagttttgt 63
          |||||||||||||||||||||||||||||||||||||| || | |||| |||||||||||
Sbjct: 1  ggttcacaagtggtgtcaggacgacaaaagctctgagtcctctcaacaccagagttttgt 60

                                 
Query: 64 tgccccgactccttttgtggtca 86
          |||||||||||||||||||||||
Sbjct: 61 tgccccgactccttttgtggtca 83




>24748_bfl-mir-4872a:mirbase
          Length = 88

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                    
Query: 34 ctctgagttctgttaacatcagagttttgttgccccgactcc 75
          |||||||||||||| || ||||||||||| | ||||| ||||
Sbjct: 34 ctctgagttctgtttacttcagagttttggtaccccggctcc 75




>24749_bfl-mir-4872b:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                               
Query: 34 ctctgagttctgttaacatcagagttttgttgccccg 70
          ||||||||||| ||| | ||||||||||||| |||||
Sbjct: 31 ctctgagttctcttagcctcagagttttgttaccccg 67