miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26379_tgu-let-7b:mirbase
Length = 92
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 caggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 caggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagata 65
Query: 61 actatacaacctactgccttccctg 85
|||||||||||||||||||||||||
Sbjct: 66 actatacaacctactgccttccctg 90
>27321_mdo-let-7b:mirbase
Length = 88
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 65
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 8 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcagaagataactat 67
Query: 66 acaacctactgccttccctg 85
||||||||||||||||||||
Sbjct: 68 acaacctactgccttccctg 87
>31410_oan-let-7b:mirbase
Length = 82
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 3 ggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataac 62
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 2 ggatgaggtagtaggttgtgtggtttcaggggagtgattttgccccaatcagaagataac 61
Query: 63 tatacaacctactgccttccc 83
|||||| ||||||||||||||
Sbjct: 62 tatacagcctactgccttccc 82
>34528_fru-let-7b:mirbase
Length = 84
Score = 129 bits (65), Expect = 3e-31
Identities = 81/85 (95%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 1 caggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagata 60
|||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||
Sbjct: 1 cagggtgaggtagtaggttgtgtggtttcagggttgtgattttgcccc-atcaggagcta 59
Query: 61 actatacaacctactgccttccctg 85
|||||||||||||||||||||||||
Sbjct: 60 actatacaacctactgccttccctg 84
>34676_tni-let-7b:mirbase
Length = 84
Score = 129 bits (65), Expect = 3e-31
Identities = 81/85 (95%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 1 caggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagata 60
|||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||
Sbjct: 1 cagggtgaggtagtaggttgtgtggtttcagggttgtgattttgcccc-atcaggagcta 59
Query: 61 actatacaacctactgccttccctg 85
|||||||||||||||||||||||||
Sbjct: 60 actatacaacctactgccttccctg 84
>34171_dre-let-7b:mirbase
Length = 94
Score = 121 bits (61), Expect = 8e-29
Identities = 80/85 (94%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 1 caggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagata 60
|||| ||||||||||||||||||||||||||||| ||| ||||||||| |||||||| ||
Sbjct: 6 cagggtgaggtagtaggttgtgtggtttcagggttgtgtttttgcccc-atcaggagtta 64
Query: 61 actatacaacctactgccttccctg 85
|||||||||||||||||||||||||
Sbjct: 65 actatacaacctactgccttccctg 89
>27632_mml-let-7b:mirbase
Length = 83
Score = 113 bits (57), Expect = 2e-26
Identities = 75/80 (93%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 65
|||||||||||||||||||||||||||| |||||| ||||||| |||| ||||||||||
Sbjct: 6 tgaggtagtaggttgtgtggtttcagggcagtgatgttgcccc--tcagaagataactat 63
Query: 66 acaacctactgccttccctg 85
||||||||||||||||||||
Sbjct: 64 acaacctactgccttccctg 83
>30129_ptr-let-7b:mirbase
Length = 82
Score = 113 bits (57), Expect = 2e-26
Identities = 75/80 (93%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 65
|||||||||||||||||||||||||||| |||||| ||||||| |||| ||||||||||
Sbjct: 5 tgaggtagtaggttgtgtggtttcagggcagtgatgttgcccc--tcagaagataactat 62
Query: 66 acaacctactgccttccctg 85
||||||||||||||||||||
Sbjct: 63 acaacctactgccttccctg 82
>30734_ppy-let-7b:mirbase
Length = 83
Score = 113 bits (57), Expect = 2e-26
Identities = 75/80 (93%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 65
|||||||||||||||||||||||||||| |||||| ||||||| |||| ||||||||||
Sbjct: 6 tgaggtagtaggttgtgtggtttcagggcagtgatgttgcccc--tcagaagataactat 63
Query: 66 acaacctactgccttccctg 85
||||||||||||||||||||
Sbjct: 64 acaacctactgccttccctg 83
>31754_mmu-let-7b:mirbase
Length = 85
Score = 107 bits (54), Expect = 1e-24
Identities = 78/85 (91%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 1 caggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagata 60
|||| |||||||||||||||||||||||||||| |||||| ||||||| || | |||||
Sbjct: 2 cagggtgaggtagtaggttgtgtggtttcagggcagtgatgttgcccc--tccgaagata 59
Query: 61 actatacaacctactgccttccctg 85
|||||||||||||||||||||||||
Sbjct: 60 actatacaacctactgccttccctg 84
>28342_hsa-let-7b:mirbase
Length = 83
Score = 105 bits (53), Expect = 5e-24
Identities = 74/80 (92%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 65
|||||||||||||||||||||||||||| |||||| ||||||| || | ||||||||||
Sbjct: 6 tgaggtagtaggttgtgtggtttcagggcagtgatgttgcccc--tcggaagataactat 63
Query: 66 acaacctactgccttccctg 85
||||||||||||||||||||
Sbjct: 64 acaacctactgccttccctg 83
>33111_bta-let-7b:mirbase
Length = 81
Score = 105 bits (53), Expect = 5e-24
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 65
||||||||||||||||||||||||||||||||||| ||||||| || | ||||||||||
Sbjct: 6 tgaggtagtaggttgtgtggtttcagggtagtgatgttgcccc-ctcggaagataactat 64
Query: 66 acaacctactgccttcc 82
|||||||||||||||||
Sbjct: 65 acaacctactgccttcc 81
>33789_bta-mir-3596:mirbase
Length = 83
Score = 105 bits (53), Expect = 5e-24
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 65
||||||||||||||||||||||||||||||||||| ||||||| || | ||||||||||
Sbjct: 81 tgaggtagtaggttgtgtggtttcagggtagtgatgttgcccc-ctcggaagataactat 23
Query: 66 acaacctactgccttcc 82
|||||||||||||||||
Sbjct: 22 acaacctactgccttcc 6
>32640_rno-let-7b:mirbase
Length = 85
Score = 97.6 bits (49), Expect = 1e-21
Identities = 73/80 (91%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 65
|||||||||||||||||||||||||||| |||||| | ||||| || | ||||||||||
Sbjct: 7 tgaggtagtaggttgtgtggtttcagggcagtgatgtcgcccc--tccgaagataactat 64
Query: 66 acaacctactgccttccctg 85
||||||||||||||||||||
Sbjct: 65 acaacctactgccttccctg 84
>25874_gga-let-7f:mirbase
Length = 87
Score = 63.9 bits (32), Expect = 2e-11
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 65
||||||||||| |||| | ||| |||||||| ||||| ||| |||||||||||||||
Sbjct: 7 tgaggtagtagattgtatagttgtagggtagttattttaccctgttcaggagataactat 66
Query: 66 acaacctactgccttccctg 85
|||| ||| |||||||||||
Sbjct: 67 acaatctattgccttccctg 86
>26384_tgu-let-7f:mirbase
Length = 92
Score = 63.9 bits (32), Expect = 2e-11
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 65
||||||||||| |||| | ||| |||||||| ||||| ||| |||||||||||||||
Sbjct: 11 tgaggtagtagattgtatagttgtagggtagttattttaccctgttcaggagataactat 70
Query: 66 acaacctactgccttccctg 85
|||| ||| |||||||||||
Sbjct: 71 acaatctattgccttccctg 90
>26934_eca-let-7f:mirbase
Length = 87
Score = 63.9 bits (32), Expect = 2e-11
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 65
||||||||||| |||| | ||| ||||||||||||| ||| |||||||||||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggtagtgattttaccctgttcaggagataactat 66
Query: 66 acaacctactgccttccctg 85
|||| ||| |||||||||||
Sbjct: 67 acaatctattgccttccctg 86
>27323_mdo-let-7f-1:mirbase
Length = 87
Score = 63.9 bits (32), Expect = 2e-11
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 65
||||||||||| |||| | ||| ||||||||||||| ||| |||||||||||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggtagtgattttaccctgttcaggagataactat 66
Query: 66 acaacctactgccttccctg 85
|||| ||| |||||||||||
Sbjct: 67 acaatctattgccttccctg 86
>27636_mml-let-7f-1:mirbase
Length = 87
Score = 63.9 bits (32), Expect = 2e-11
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 65
||||||||||| |||| | ||| ||||||||||||| ||| |||||||||||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggtagtgattttaccctgttcaggagataactat 66
Query: 66 acaacctactgccttccctg 85
|||| ||| |||||||||||
Sbjct: 67 acaatctattgccttccctg 86
>28346_hsa-let-7f-1:mirbase
Length = 87
Score = 63.9 bits (32), Expect = 2e-11
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 65
||||||||||| |||| | ||| ||||||||||||| ||| |||||||||||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggtagtgattttaccctgttcaggagataactat 66
Query: 66 acaacctactgccttccctg 85
|||| ||| |||||||||||
Sbjct: 67 acaatctattgccttccctg 86
>30133_ptr-let-7f-1:mirbase
Length = 86
Score = 63.9 bits (32), Expect = 2e-11
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 65
||||||||||| |||| | ||| ||||||||||||| ||| |||||||||||||||
Sbjct: 6 tgaggtagtagattgtatagttgtggggtagtgattttaccctgttcaggagataactat 65
Query: 66 acaacctactgccttccctg 85
|||| ||| |||||||||||
Sbjct: 66 acaatctattgccttccctg 85
>30738_ppy-let-7f-1:mirbase
Length = 87
Score = 63.9 bits (32), Expect = 2e-11
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 65
||||||||||| |||| | ||| ||||||||||||| ||| |||||||||||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggtagtgattttaccctgttcaggagataactat 66
Query: 66 acaacctactgccttccctg 85
|||| ||| |||||||||||
Sbjct: 67 acaatctattgccttccctg 86
>33115_bta-let-7f-1:mirbase
Length = 87
Score = 63.9 bits (32), Expect = 2e-11
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 65
||||||||||| |||| | ||| ||||||||||||| ||| |||||||||||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggtagtgattttaccctgttcaggagataactat 66
Query: 66 acaacctactgccttccctg 85
|||| ||| |||||||||||
Sbjct: 67 acaatctattgccttccctg 86
>26610_cfa-let-7f:mirbase
Length = 78
Score = 60.0 bits (30), Expect = 3e-10
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 65
||||||||||| |||| | ||| ||||||||||||| ||| |||||||||||||||
Sbjct: 1 tgaggtagtagattgtatagttgtggggtagtgattttaccctgttcaggagataactat 60
Query: 66 acaacctactgccttccc 83
|||| ||| |||||||||
Sbjct: 61 acaatctattgccttccc 78
>26607_cfa-let-7b:mirbase
Length = 69
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcaggg 33
||||||||||||||||||||||||||||
Sbjct: 40 tgaggtagtaggttgtgtggtttcaggg 67
>31759_mmu-let-7f-1:mirbase
Length = 89
Score = 56.0 bits (28), Expect = 4e-09
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 65
||||||||||| |||| | ||| ||||||||||||| ||| | |||||||||||||
Sbjct: 8 tgaggtagtagattgtatagttgtggggtagtgattttaccctgtttaggagataactat 67
Query: 66 acaacctactgccttccctg 85
|||| ||| |||||||||||
Sbjct: 68 acaatctattgccttccctg 87
>32645_rno-let-7f-1:mirbase
Length = 89
Score = 56.0 bits (28), Expect = 4e-09
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 65
||||||||||| |||| | ||| ||||||||||||| ||| | |||||||||||||
Sbjct: 8 tgaggtagtagattgtatagttgtggggtagtgattttaccctgtttaggagataactat 67
Query: 66 acaacctactgccttccctg 85
|||| ||| |||||||||||
Sbjct: 68 acaatctattgccttccctg 87
>33101_rno-mir-3596d:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 4e-09
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 65
||||||||||| |||| | ||| ||||||||||||| ||| | |||||||||||||
Sbjct: 86 tgaggtagtagattgtatagttgtggggtagtgattttaccctgtttaggagataactat 27
Query: 66 acaacctactgccttccctg 85
|||| ||| |||||||||||
Sbjct: 26 acaatctattgccttccctg 7
>34532_fru-let-7h:mirbase
Length = 84
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 51 tcaggagataactatacaacctactgccttcc 82
|||||||||||||||||||| |||||||||||
Sbjct: 52 tcaggagataactatacaacttactgccttcc 83
>34680_tni-let-7h:mirbase
Length = 99
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 53 aggagataactatacaacctactgccttcc 82
|||||||||||||||||| |||||||||||
Sbjct: 69 aggagataactatacaacttactgccttcc 98
>25753_xtr-mir-98:mirbase
Length = 108
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 53 aggagataactatacaacctactgccttccctg 85
|||||||||||||||| | ||||||||||||||
Sbjct: 64 aggagataactatacagcttactgccttccctg 96
>25409_pma-let-7a-2:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 3 ggatgaggtagtaggttgtgtggtttcagggt 34
||||||||||||||||||| | ||||||||||
Sbjct: 14 ggatgaggtagtaggttgtatagtttcagggt 45
>26932_eca-let-7d:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 66/79 (83%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 2 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 61
|||| |||||||||||||| | |||| |||| || |||||||||| | |||||||||
Sbjct: 4 aggaagaggtagtaggttgcatagttttagggcagggattttgcccaca--aggagataa 61
Query: 62 ctatacaacctactgcctt 80
|||||| |||| |||||||
Sbjct: 62 ctatacgacctgctgcctt 80
>26994_eca-mir-98:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 1e-06
Identities = 72/87 (82%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 1 caggatgaggtagtaggttgtgtggtttcagggtagtgatttt--gccccaatcaggaga 58
|||| |||||||||| ||||| | ||| |||||| |||||| |||||||| || |||
Sbjct: 17 cagggtgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaaga 76
Query: 59 taactatacaacctactgccttccctg 85
|||||||||||| |||| | |||||||
Sbjct: 77 taactatacaacttactactttccctg 103
>27322_mdo-let-7d:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 1e-06
Identities = 66/79 (83%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 2 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 61
|||| |||||||||||||| | |||| |||| || |||||||||| | ||||| |||
Sbjct: 12 aggaagaggtagtaggttgcatagttttagggcagggattttgcccaca--aggagttaa 69
Query: 62 ctatacaacctactgcctt 80
||||||||||| |||||||
Sbjct: 70 ctatacaacctgctgcctt 88
>31411_oan-let-7d:mirbase
Length = 116
Score = 48.1 bits (24), Expect = 1e-06
Identities = 66/79 (83%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 2 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 61
|||| |||||||||||||| | |||| |||| ||||||||||| | || ||| | |||
Sbjct: 20 aggaagaggtagtaggttgcatagttttagggcagtgattttgctc--ataaggtgttaa 77
Query: 62 ctatacaacctactgcctt 80
||||||||||| |||||||
Sbjct: 78 ctatacaacctgctgcctt 96
>31413_oan-let-7f-1:mirbase
Length = 149
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 54 ggagataactatacaacctactgccttccctg 85
|||||||||||||||| ||| |||||||||||
Sbjct: 79 ggagataactatacaatctattgccttccctg 110
>32705_rno-mir-98:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 4e-06
Identities = 68/82 (82%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgatttt--gccccaatcaggagataact 63
|||||||||| ||||| | ||| |||||| |||||| |||||||| || ||||||||
Sbjct: 16 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaataagaagataact 75
Query: 64 atacaacctactgccttccctg 85
||||||| |||| | |||||||
Sbjct: 76 atacaacttactactttccctg 97
>34165_dre-let-7a-1:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 ggagataactatacaacctactg 76
|||||||||||||||||||||||
Sbjct: 53 ggagataactatacaacctactg 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 3 ggatgaggtagtaggttgtgtggtttcagggt 34
||||||||||||||||||| | |||| |||||
Sbjct: 8 ggatgaggtagtaggttgtatagttttagggt 39
>28411_hsa-mir-98:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 44 gccccaatcaggagataactatacaacctactgccttccctg 85
|||||||| || ||||||||||||||| |||| | |||||||
Sbjct: 62 gccccaattagaagataactatacaacttactactttccctg 103
>30195_ptr-mir-98:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 44 gccccaatcaggagataactatacaacctactgccttccctg 85
|||||||| || ||||||||||||||| |||| | |||||||
Sbjct: 62 gccccaattagaagataactatacaacttactactttccctg 103
>34178_dre-let-7f:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 56 agataactatacaacctactgccttccctg 85
|||||||||||||| ||| |||||||||||
Sbjct: 70 agataactatacaatctattgccttccctg 99
>34181_dre-let-7h:mirbase
Length = 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 aggagataactatacaacctactgccttcc 82
||||||||||||||||| |||||||||||
Sbjct: 70 aggagataactatacaatttactgccttcc 99
>26672_cfa-mir-98:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 6e-05
Identities = 60/72 (83%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgatttt--gccccaatcaggagataact 63
|||||||||| ||||| | ||| |||||| |||||| |||||||| || ||||||||
Sbjct: 1 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 60
Query: 64 atacaacctact 75
||||||| ||||
Sbjct: 61 atacaacttact 72
>33955_ssc-mir-98:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 6e-05
Identities = 60/72 (83%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgatttt--gccccaatcaggagataact 63
|||||||||| ||||| | ||| |||||| |||||| |||||||| || ||||||||
Sbjct: 4 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 63
Query: 64 atacaacctact 75
||||||| ||||
Sbjct: 64 atacaacttact 75
>34173_dre-let-7c-2:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 caggatgaggtagtaggttgtgtggtttc 29
|||| |||||||||||||||| |||||||
Sbjct: 10 caggctgaggtagtaggttgtatggtttc 38
>25678_xtr-let-7c:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 caggatgaggtagtaggttgtgtggttt 28
|||| |||||||||||||||| ||||||
Sbjct: 11 caggttgaggtagtaggttgtatggttt 38
>25868_gga-let-7a-1:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 3 ggatgaggtagtaggttgtgtggtttcagggt 34
||||||||||||||||||| | |||| |||||
Sbjct: 10 ggatgaggtagtaggttgtatagttttagggt 41
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 54 ggagataactatacaacctactg 76
|||||||||||||||| ||||||
Sbjct: 56 ggagataactatacaatctactg 78
>25873_gga-let-7d:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 53 aggagataactatacaacctactgcctt 80
||||| |||||||||||||| |||||||
Sbjct: 61 aggaggtaactatacaacctgctgcctt 88
>26377_tgu-let-7a-3:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 3 ggatgaggtagtaggttgtgtggtttcagggt 34
||||||||||||||||||| | |||| |||||
Sbjct: 58 ggatgaggtagtaggttgtatagttttagggt 89
>26382_tgu-let-7d:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 53 aggagataactatacaacctactgcctt 80
||||| |||||||||||||| |||||||
Sbjct: 56 aggaggtaactatacaacctgctgcctt 83
>27318_mdo-let-7a-1:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 3 ggatgaggtagtaggttgtgtggtttcagggt 34
||||||||||||||||||| | |||| |||||
Sbjct: 12 ggatgaggtagtaggttgtatagttttagggt 43
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 54 ggagataactatacaacctactg 76
|||||||||||||||| ||||||
Sbjct: 58 ggagataactatacaatctactg 80
>27500_age-mir-98:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 44 gccccaatcaggagataactatacaacctact 75
|||||||| || ||||||||||||||| ||||
Sbjct: 42 gccccaattagaagataactatacaacttact 73
>27629_mml-let-7a-1:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 3 ggatgaggtagtaggttgtgtggtttcagggt 34
||||||||||||||||||| | |||| |||||
Sbjct: 3 ggatgaggtagtaggttgtatagttttagggt 34
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 54 ggagataactatacaacctactg 76
|||||||||||||||| ||||||
Sbjct: 49 ggagataactatacaatctactg 71
>27634_mml-let-7d:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 65/79 (82%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 2 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 61
|||| |||||||||||||| | |||| |||| || |||||||||| | ||||| |||
Sbjct: 4 aggaagaggtagtaggttgcatagttttagggcagggattttgccc--acaaggaggtaa 61
Query: 62 ctatacaacctactgcctt 80
|||||| |||| |||||||
Sbjct: 62 ctatacgacctgctgcctt 80
>27701_mml-mir-98:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 44 gccccaatcaggagataactatacaacctact 75
|||||||| || ||||||||||||||| ||||
Sbjct: 42 gccccaattagaagataactatacaacttact 73
>28291_ggo-mir-98:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 44 gccccaatcaggagataactatacaacctact 75
|||||||| || ||||||||||||||| ||||
Sbjct: 42 gccccaattagaagataactatacaacttact 73
>28339_hsa-let-7a-1:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 3 ggatgaggtagtaggttgtgtggtttcagggt 34
||||||||||||||||||| | |||| |||||
Sbjct: 3 ggatgaggtagtaggttgtatagttttagggt 34
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 54 ggagataactatacaacctactg 76
|||||||||||||||| ||||||
Sbjct: 49 ggagataactatacaatctactg 71
>28344_hsa-let-7d:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 65/79 (82%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 2 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 61
|||| |||||||||||||| | |||| |||| || |||||||||| | ||||| |||
Sbjct: 4 aggaagaggtagtaggttgcatagttttagggcagggattttgccc--acaaggaggtaa 61
Query: 62 ctatacaacctactgcctt 80
|||||| |||| |||||||
Sbjct: 62 ctatacgacctgctgcctt 80
>30078_ppa-mir-98:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 44 gccccaatcaggagataactatacaacctact 75
|||||||| || ||||||||||||||| ||||
Sbjct: 42 gccccaattagaagataactatacaacttact 73
>30126_ptr-let-7a-1:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 3 ggatgaggtagtaggttgtgtggtttcagggt 34
||||||||||||||||||| | |||| |||||
Sbjct: 2 ggatgaggtagtaggttgtatagttttagggt 33
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 54 ggagataactatacaacctactg 76
|||||||||||||||| ||||||
Sbjct: 48 ggagataactatacaatctactg 70
>30131_ptr-let-7d:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 65/79 (82%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 2 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 61
|||| |||||||||||||| | |||| |||| || |||||||||| | ||||| |||
Sbjct: 3 aggaagaggtagtaggttgcatagttttagggcagggattttgccc--acaaggaggtaa 60
Query: 62 ctatacaacctactgcctt 80
|||||| |||| |||||||
Sbjct: 61 ctatacgacctgctgcctt 79
>30731_ppy-let-7a-1:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 3 ggatgaggtagtaggttgtgtggtttcagggt 34
||||||||||||||||||| | |||| |||||
Sbjct: 3 ggatgaggtagtaggttgtatagttttagggt 34
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 54 ggagataactatacaacctactg 76
|||||||||||||||| ||||||
Sbjct: 49 ggagataactatacaatctactg 71
>30736_ppy-let-7d:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 65/79 (82%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 2 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 61
|||| |||||||||||||| | |||| |||| || |||||||||| | ||||| |||
Sbjct: 4 aggaagaggtagtaggttgcatagttttagggcagggattttgccc--acaaggaggtaa 61
Query: 62 ctatacaacctactgcctt 80
|||||| |||| |||||||
Sbjct: 62 ctatacgacctgctgcctt 80
>30801_ppy-mir-98:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 44 gccccaatcaggagataactatacaacctact 75
|||||||| || ||||||||||||||| ||||
Sbjct: 42 gccccaattagaagataactatacaacttact 73
>31752_mmu-let-7a-1:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 3 ggatgaggtagtaggttgtgtggtttcagggt 34
||||||||||||||||||| | |||| |||||
Sbjct: 10 ggatgaggtagtaggttgtatagttttagggt 41
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 54 ggagataactatacaacctactg 76
|||||||||||||||| ||||||
Sbjct: 56 ggagataactatacaatctactg 78
>31757_mmu-let-7d:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 65/79 (82%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 2 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 61
|||| |||||||||||||| | |||| |||| || |||||||||| | ||||| |||
Sbjct: 12 aggaagaggtagtaggttgcatagttttagggcagagattttgccc--acaaggagttaa 69
Query: 62 ctatacaacctactgcctt 80
|||||| |||| |||||||
Sbjct: 70 ctatacgacctgctgcctt 88
>32638_rno-let-7a-1:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 3 ggatgaggtagtaggttgtgtggtttcagggt 34
||||||||||||||||||| | |||| |||||
Sbjct: 10 ggatgaggtagtaggttgtatagttttagggt 41
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 54 ggagataactatacaacctactg 76
|||||||||||||||| ||||||
Sbjct: 56 ggagataactatacaatctactg 78
>32643_rno-let-7d:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 65/79 (82%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 2 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 61
|||| |||||||||||||| | |||| |||| || |||||||||| | ||||| |||
Sbjct: 10 aggaagaggtagtaggttgcatagttttagggcagagattttgccc--acaaggagttaa 67
Query: 62 ctatacaacctactgcctt 80
|||||| |||| |||||||
Sbjct: 68 ctatacgacctgctgcctt 86
>33099_rno-mir-3596b:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 2e-04
Identities = 65/79 (82%), Gaps = 2/79 (2%)
Strand = Plus / Minus
Query: 2 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 61
|||| |||||||||||||| | |||| |||| || |||||||||| | ||||| |||
Sbjct: 87 aggaagaggtagtaggttgcatagttttagggcagagattttgccc--acaaggagttaa 30
Query: 62 ctatacaacctactgcctt 80
|||||| |||| |||||||
Sbjct: 29 ctatacgacctgctgcctt 11
>33108_bta-let-7a-1:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 3 ggatgaggtagtaggttgtgtggtttcagggt 34
||||||||||||||||||| | |||| |||||
Sbjct: 3 ggatgaggtagtaggttgtatagttttagggt 34
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 54 ggagataactatacaacctactg 76
|||||||||||||||| ||||||
Sbjct: 49 ggagataactatacaatctactg 71
>33899_ssc-let-7a-2:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 3 ggatgaggtagtaggttgtgtggtttcagggt 34
||||||||||||||||||| | |||| |||||
Sbjct: 8 ggatgaggtagtaggttgtatagttttagggt 39
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 54 ggagataactatacaacctactg 76
|||||||||||||||| ||||||
Sbjct: 54 ggagataactatacaatctactg 76
>34172_dre-let-7c-1:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 caggatgaggtagtaggttgtgtggttt 28
|||| |||||||||||||||| ||||||
Sbjct: 18 caggctgaggtagtaggttgtatggttt 45
>25410_pma-let-7a-3:mirbase
Length = 86
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ggatgaggtagtaggttgt 21
|||||||||||||||||||
Sbjct: 6 ggatgaggtagtaggttgt 24
>25677_xtr-let-7b:mirbase
Length = 82
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 54 ggagataactatacaacctactgcctt 80
||||||||||| |||| ||||||||||
Sbjct: 51 ggagataactagacaaactactgcctt 77
>25679_xtr-let-7e-1:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ggatgaggtagtaggttgt 21
|||||||||||||||||||
Sbjct: 8 ggatgaggtagtaggttgt 26
>25872_gga-let-7c:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggttt 28
|||||||||||||||| ||||||
Sbjct: 11 tgaggtagtaggttgtatggttt 33
>26380_tgu-let-7c-1:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggttt 28
|||||||||||||||| ||||||
Sbjct: 11 tgaggtagtaggttgtatggttt 33
>26381_tgu-let-7c-2:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggttt 28
|||||||||||||||| ||||||
Sbjct: 11 tgaggtagtaggttgtatggttt 33
>26608_cfa-let-7c:mirbase
Length = 67
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggttt 28
|||||||||||||||| ||||||
Sbjct: 1 tgaggtagtaggttgtatggttt 23
>26931_eca-let-7c:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggttt 28
|||||||||||||||| ||||||
Sbjct: 4 tgaggtagtaggttgtatggttt 26
>27633_mml-let-7c:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggttt 28
|||||||||||||||| ||||||
Sbjct: 11 tgaggtagtaggttgtatggttt 33
>28343_hsa-let-7c:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggttt 28
|||||||||||||||| ||||||
Sbjct: 11 tgaggtagtaggttgtatggttt 33
>30130_ptr-let-7c:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggttt 28
|||||||||||||||| ||||||
Sbjct: 10 tgaggtagtaggttgtatggttt 32
>30735_ppy-let-7c:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggttt 28
|||||||||||||||| ||||||
Sbjct: 11 tgaggtagtaggttgtatggttt 33
>31755_mmu-let-7c-1:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggttt 28
|||||||||||||||| ||||||
Sbjct: 16 tgaggtagtaggttgtatggttt 38
>31756_mmu-let-7c-2:mirbase
Length = 95
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggttt 28
|||||||||||||||| ||||||
Sbjct: 14 tgaggtagtaggttgtatggttt 36
>32641_rno-let-7c-1:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggttt 28
|||||||||||||||| ||||||
Sbjct: 16 tgaggtagtaggttgtatggttt 38
>32642_rno-let-7c-2:mirbase
Length = 95
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggttt 28
|||||||||||||||| ||||||
Sbjct: 14 tgaggtagtaggttgtatggttt 36
>33112_bta-let-7c:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggttt 28
|||||||||||||||| ||||||
Sbjct: 11 tgaggtagtaggttgtatggttt 33
>33184_bta-mir-98:mirbase
Length = 119
Score = 38.2 bits (19), Expect = 0.001
Identities = 67/82 (81%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggtttcagggtagtgatttt--gccccaatcaggagataact 63
|||||||||| ||||| | ||| |||||| |||||| |||||||| | ||||||||
Sbjct: 22 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaatttgaagataact 81
Query: 64 atacaacctactgccttccctg 85
||||||| |||| | |||||||
Sbjct: 82 atacaacttactactttccctg 103
>33900_ssc-let-7c:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 tgaggtagtaggttgtgtggttt 28
|||||||||||||||| ||||||
Sbjct: 16 tgaggtagtaggttgtatggttt 38
>34168_dre-let-7a-4:mirbase
Length = 93
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ggatgaggtagtaggttgt 21
|||||||||||||||||||
Sbjct: 12 ggatgaggtagtaggttgt 30
>34170_dre-let-7a-6:mirbase
Length = 129
Score = 38.2 bits (19), Expect = 0.001
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 51 tcaggagataactatacaacctactgccttccctg 85
||||| |||||||||||| ||| |||||||||||
Sbjct: 73 tcaggtgataactatacagtctattgccttccctg 107
>34179_dre-let-7g-1:mirbase
Length = 96
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 54 ggagataactatacaacctactg 76
||||||||||||||| |||||||
Sbjct: 55 ggagataactatacagcctactg 77
