miRNEST 2.0, an integrative microRNA resource :: BLAST
>27322_mdo-let-7d:mirbase
Length = 106
Score = 168 bits (85), Expect = 5e-43
Identities = 97/101 (96%)
Strand = Plus / Plus
Query: 3 tgggctcctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaag 62
|||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 3 tgggctcctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaag 62
Query: 63 gaggtaactatacaacctgctgcctttcttagggctttatt 103
||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 63 gagttaactatacaacctgctgcctttcttagggctctatt 103
>26382_tgu-let-7d:mirbase
Length = 92
Score = 167 bits (84), Expect = 2e-42
Identities = 90/92 (97%)
Strand = Plus / Plus
Query: 6 gctcctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaaggag 65
||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 gctcctaggaagaggtagtaggttgcatagttttagggcagggattttgctcagaaggag 60
Query: 66 gtaactatacaacctgctgcctttcttagggc 97
||||||||||||||||||||||||||||||||
Sbjct: 61 gtaactatacaacctgctgcctttcttagggc 92
>31411_oan-let-7d:mirbase
Length = 116
Score = 161 bits (81), Expect = 1e-40
Identities = 96/101 (95%)
Strand = Plus / Plus
Query: 3 tgggctcctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaag 62
|||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||
Sbjct: 11 tgggctcctaggaagaggtagtaggttgcatagttttagggcagtgattttgctcataag 70
Query: 63 gaggtaactatacaacctgctgcctttcttagggctttatt 103
| | |||||||||||||||||||||||||||||||||||||
Sbjct: 71 gtgttaactatacaacctgctgcctttcttagggctttatt 111
>27634_mml-let-7d:mirbase
Length = 87
Score = 149 bits (75), Expect = 5e-37
Identities = 84/87 (96%)
Strand = Plus / Plus
Query: 9 cctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaaggaggta 68
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60
Query: 69 actatacaacctgctgcctttcttagg 95
||||||| |||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87
>28344_hsa-let-7d:mirbase
Length = 87
Score = 149 bits (75), Expect = 5e-37
Identities = 84/87 (96%)
Strand = Plus / Plus
Query: 9 cctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaaggaggta 68
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60
Query: 69 actatacaacctgctgcctttcttagg 95
||||||| |||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87
>30736_ppy-let-7d:mirbase
Length = 87
Score = 149 bits (75), Expect = 5e-37
Identities = 84/87 (96%)
Strand = Plus / Plus
Query: 9 cctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaaggaggta 68
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60
Query: 69 actatacaacctgctgcctttcttagg 95
||||||| |||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87
>32643_rno-let-7d:mirbase
Length = 98
Score = 149 bits (75), Expect = 5e-37
Identities = 90/95 (94%)
Strand = Plus / Plus
Query: 3 tgggctcctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaag 62
|||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||
Sbjct: 1 tgggctcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaag 60
Query: 63 gaggtaactatacaacctgctgcctttcttagggc 97
||| ||||||||| |||||||||||||||||||||
Sbjct: 61 gagttaactatacgacctgctgcctttcttagggc 95
>30131_ptr-let-7d:mirbase
Length = 86
Score = 147 bits (74), Expect = 2e-36
Identities = 83/86 (96%)
Strand = Plus / Plus
Query: 10 ctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaaggaggtaa 69
||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 ctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggtaa 60
Query: 70 ctatacaacctgctgcctttcttagg 95
|||||| |||||||||||||||||||
Sbjct: 61 ctatacgacctgctgcctttcttagg 86
>33099_rno-mir-3596b:mirbase
Length = 95
Score = 147 bits (74), Expect = 2e-36
Identities = 89/94 (94%)
Strand = Plus / Minus
Query: 4 gggctcctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaagg 63
||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||
Sbjct: 95 gggctcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaagg 36
Query: 64 aggtaactatacaacctgctgcctttcttagggc 97
|| ||||||||| |||||||||||||||||||||
Sbjct: 35 agttaactatacgacctgctgcctttcttagggc 2
>31757_mmu-let-7d:mirbase
Length = 103
Score = 145 bits (73), Expect = 7e-36
Identities = 94/101 (93%)
Strand = Plus / Plus
Query: 3 tgggctcctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaag 62
|||| ||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||
Sbjct: 3 tgggttcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaag 62
Query: 63 gaggtaactatacaacctgctgcctttcttagggctttatt 103
||| ||||||||| ||||||||||||||||||||| |||||
Sbjct: 63 gagttaactatacgacctgctgcctttcttagggccttatt 103
>26932_eca-let-7d:mirbase
Length = 87
Score = 141 bits (71), Expect = 1e-34
Identities = 83/87 (95%)
Strand = Plus / Plus
Query: 9 cctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaaggaggta 68
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
Query: 69 actatacaacctgctgcctttcttagg 95
||||||| |||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87
>33113_bta-let-7d:mirbase
Length = 87
Score = 141 bits (71), Expect = 1e-34
Identities = 83/87 (95%)
Strand = Plus / Plus
Query: 9 cctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaaggaggta 68
|||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 1 cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 60
Query: 69 actatacaacctgctgcctttcttagg 95
||||||| |||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87
>25871_gga-let-7b:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 61 aggaggtaactatacaacctgctgcctt 88
||||| |||||||||||||| |||||||
Sbjct: 53 aggagataactatacaacctactgcctt 80
>26375_tgu-let-7a-1:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 17 gaggtagtgggttgcatagttttagggc 44
|||||||| ||||| |||||||||||||
Sbjct: 12 gaggtagtaggttgtatagttttagggc 39
>26379_tgu-let-7b:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 61 aggaggtaactatacaacctgctgcctt 88
||||| |||||||||||||| |||||||
Sbjct: 58 aggagataactatacaacctactgcctt 85
>34171_dre-let-7b:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 61 aggaggtaactatacaacctgctgcctt 88
||||| |||||||||||||| |||||||
Sbjct: 57 aggagttaactatacaacctactgcctt 84
>34528_fru-let-7b:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 61 aggaggtaactatacaacctgctgcctt 88
||||| |||||||||||||| |||||||
Sbjct: 52 aggagctaactatacaacctactgcctt 79
>34676_tni-let-7b:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 61 aggaggtaactatacaacctgctgcctt 88
||||| |||||||||||||| |||||||
Sbjct: 52 aggagctaactatacaacctactgcctt 79