miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>27322_mdo-let-7d:mirbase
          Length = 106

 Score =  168 bits (85), Expect = 5e-43
 Identities = 97/101 (96%)
 Strand = Plus / Plus

                                                                       
Query: 3   tgggctcctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaag 62
           |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 3   tgggctcctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaag 62

                                                    
Query: 63  gaggtaactatacaacctgctgcctttcttagggctttatt 103
           ||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 63  gagttaactatacaacctgctgcctttcttagggctctatt 103




>26382_tgu-let-7d:mirbase
          Length = 92

 Score =  167 bits (84), Expect = 2e-42
 Identities = 90/92 (97%)
 Strand = Plus / Plus

                                                                      
Query: 6  gctcctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaaggag 65
          ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1  gctcctaggaagaggtagtaggttgcatagttttagggcagggattttgctcagaaggag 60

                                          
Query: 66 gtaactatacaacctgctgcctttcttagggc 97
          ||||||||||||||||||||||||||||||||
Sbjct: 61 gtaactatacaacctgctgcctttcttagggc 92




>31411_oan-let-7d:mirbase
          Length = 116

 Score =  161 bits (81), Expect = 1e-40
 Identities = 96/101 (95%)
 Strand = Plus / Plus

                                                                       
Query: 3   tgggctcctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaag 62
           |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||
Sbjct: 11  tgggctcctaggaagaggtagtaggttgcatagttttagggcagtgattttgctcataag 70

                                                    
Query: 63  gaggtaactatacaacctgctgcctttcttagggctttatt 103
           | | |||||||||||||||||||||||||||||||||||||
Sbjct: 71  gtgttaactatacaacctgctgcctttcttagggctttatt 111




>27634_mml-let-7d:mirbase
          Length = 87

 Score =  149 bits (75), Expect = 5e-37
 Identities = 84/87 (96%)
 Strand = Plus / Plus

                                                                      
Query: 9  cctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaaggaggta 68
          |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1  cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60

                                     
Query: 69 actatacaacctgctgcctttcttagg 95
          ||||||| |||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87




>28344_hsa-let-7d:mirbase
          Length = 87

 Score =  149 bits (75), Expect = 5e-37
 Identities = 84/87 (96%)
 Strand = Plus / Plus

                                                                      
Query: 9  cctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaaggaggta 68
          |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1  cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60

                                     
Query: 69 actatacaacctgctgcctttcttagg 95
          ||||||| |||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87




>30736_ppy-let-7d:mirbase
          Length = 87

 Score =  149 bits (75), Expect = 5e-37
 Identities = 84/87 (96%)
 Strand = Plus / Plus

                                                                      
Query: 9  cctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaaggaggta 68
          |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1  cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60

                                     
Query: 69 actatacaacctgctgcctttcttagg 95
          ||||||| |||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87




>32643_rno-let-7d:mirbase
          Length = 98

 Score =  149 bits (75), Expect = 5e-37
 Identities = 90/95 (94%)
 Strand = Plus / Plus

                                                                      
Query: 3  tgggctcctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaag 62
          |||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||
Sbjct: 1  tgggctcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaag 60

                                             
Query: 63 gaggtaactatacaacctgctgcctttcttagggc 97
          ||| ||||||||| |||||||||||||||||||||
Sbjct: 61 gagttaactatacgacctgctgcctttcttagggc 95




>30131_ptr-let-7d:mirbase
          Length = 86

 Score =  147 bits (74), Expect = 2e-36
 Identities = 83/86 (96%)
 Strand = Plus / Plus

                                                                      
Query: 10 ctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaaggaggtaa 69
          ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1  ctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggtaa 60

                                    
Query: 70 ctatacaacctgctgcctttcttagg 95
          |||||| |||||||||||||||||||
Sbjct: 61 ctatacgacctgctgcctttcttagg 86




>33099_rno-mir-3596b:mirbase
          Length = 95

 Score =  147 bits (74), Expect = 2e-36
 Identities = 89/94 (94%)
 Strand = Plus / Minus

                                                                      
Query: 4  gggctcctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaagg 63
          ||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||
Sbjct: 95 gggctcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaagg 36

                                            
Query: 64 aggtaactatacaacctgctgcctttcttagggc 97
          || ||||||||| |||||||||||||||||||||
Sbjct: 35 agttaactatacgacctgctgcctttcttagggc 2




>31757_mmu-let-7d:mirbase
          Length = 103

 Score =  145 bits (73), Expect = 7e-36
 Identities = 94/101 (93%)
 Strand = Plus / Plus

                                                                       
Query: 3   tgggctcctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaag 62
           |||| ||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||
Sbjct: 3   tgggttcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaag 62

                                                    
Query: 63  gaggtaactatacaacctgctgcctttcttagggctttatt 103
           ||| ||||||||| ||||||||||||||||||||| |||||
Sbjct: 63  gagttaactatacgacctgctgcctttcttagggccttatt 103




>26932_eca-let-7d:mirbase
          Length = 87

 Score =  141 bits (71), Expect = 1e-34
 Identities = 83/87 (95%)
 Strand = Plus / Plus

                                                                      
Query: 9  cctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaaggaggta 68
          |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 1  cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60

                                     
Query: 69 actatacaacctgctgcctttcttagg 95
          ||||||| |||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87




>33113_bta-let-7d:mirbase
          Length = 87

 Score =  141 bits (71), Expect = 1e-34
 Identities = 83/87 (95%)
 Strand = Plus / Plus

                                                                      
Query: 9  cctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaaggaggta 68
          |||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 1  cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 60

                                     
Query: 69 actatacaacctgctgcctttcttagg 95
          ||||||| |||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87




>25871_gga-let-7b:mirbase
          Length = 85

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 61 aggaggtaactatacaacctgctgcctt 88
          ||||| |||||||||||||| |||||||
Sbjct: 53 aggagataactatacaacctactgcctt 80




>26375_tgu-let-7a-1:mirbase
          Length = 92

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 17 gaggtagtgggttgcatagttttagggc 44
          |||||||| ||||| |||||||||||||
Sbjct: 12 gaggtagtaggttgtatagttttagggc 39




>26379_tgu-let-7b:mirbase
          Length = 92

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 61 aggaggtaactatacaacctgctgcctt 88
          ||||| |||||||||||||| |||||||
Sbjct: 58 aggagataactatacaacctactgcctt 85




>34171_dre-let-7b:mirbase
          Length = 94

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 61 aggaggtaactatacaacctgctgcctt 88
          ||||| |||||||||||||| |||||||
Sbjct: 57 aggagttaactatacaacctactgcctt 84




>34528_fru-let-7b:mirbase
          Length = 84

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 61 aggaggtaactatacaacctgctgcctt 88
          ||||| |||||||||||||| |||||||
Sbjct: 52 aggagctaactatacaacctactgcctt 79




>34676_tni-let-7b:mirbase
          Length = 84

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 61 aggaggtaactatacaacctgctgcctt 88
          ||||| |||||||||||||| |||||||
Sbjct: 52 aggagctaactatacaacctactgcctt 79