miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34193_dre-mir-9-4:mirbase
Length = 87
Score = 133 bits (67), Expect = 2e-32
Identities = 76/79 (96%)
Strand = Plus / Plus
Query: 2 tgggttggtttttctctttggttatctagctgtatgagtgtatgtgatatcataaagcta 61
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tgggttagtttttctctttggttatctagctgtatgagtttatgtgatatcataaagcta 60
Query: 62 gagaaccgaatgtaaaaac 80
|||||||||||||| ||||
Sbjct: 61 gagaaccgaatgtataaac 79
>31421_oan-mir-9-1:mirbase
Length = 122
Score = 123 bits (62), Expect = 2e-29
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 30 tctttggttatctagctgtatgagtgtatgtgatgtcataaagctagagaaccgaatgta 89
Query: 76 aaaacc 81
||||||
Sbjct: 90 aaaacc 95
>34540_fru-mir-9-4:mirbase
Length = 85
Score = 115 bits (58), Expect = 5e-27
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 3 gggttggtttttctctttggttatctagctgtatgagtgtatgtgatatcataaagctag 62
||||| |||||| ||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 1 gggttagtttttatctttggttatctagctgtatgagtttatgtaatatcataaagctag 60
Query: 63 agaaccgaatgtaaaaac 80
||||||||||||| ||||
Sbjct: 61 agaaccgaatgtataaac 78
>34688_tni-mir-9-4:mirbase
Length = 85
Score = 115 bits (58), Expect = 5e-27
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 3 gggttggtttttctctttggttatctagctgtatgagtgtatgtgatatcataaagctag 62
||||| |||||| ||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 1 gggttagtttttatctttggttatctagctgtatgagtttatgtaatatcataaagctag 60
Query: 63 agaaccgaatgtaaaaac 80
||||||||||||| ||||
Sbjct: 61 agaaccgaatgtacaaac 78
>34196_dre-mir-9-7:mirbase
Length = 84
Score = 99.6 bits (50), Expect = 3e-22
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 3 gggttggtttttctctttggttatctagctgtatgagtgtatgtgatatcataaagctag 62
||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 1 gggttagtttttctctttggttatctagctgtatgagt-tatgaaatatcataaagctag 59
Query: 63 agaaccgaatgtaaaaac 80
||||||||| ||| ||||
Sbjct: 60 agaaccgaaagtagaaac 77
>25692_xtr-mir-9a-2:mirbase
Length = 85
Score = 83.8 bits (42), Expect = 2e-17
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 7 tggtttttctctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaa 66
||||| || ||||||||||||||||||||||||||||| | | ||||||||||||| ||
Sbjct: 6 tggttgttatctttggttatctagctgtatgagtgtattggttttcataaagctagataa 65
Query: 67 ccgaatgtaaaaac 80
||||| ||||||||
Sbjct: 66 ccgaaagtaaaaac 79
>26942_eca-mir-9a-2:mirbase
Length = 78
Score = 73.8 bits (37), Expect = 2e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||
Sbjct: 10 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 69
Query: 76 aaaac 80
|||||
Sbjct: 70 aaaac 74
>27330_mdo-mir-9-2:mirbase
Length = 87
Score = 73.8 bits (37), Expect = 2e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 76 aaaac 80
|||||
Sbjct: 76 aaaac 80
>27476_age-mir-9:mirbase
Length = 87
Score = 73.8 bits (37), Expect = 2e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 76 aaaac 80
|||||
Sbjct: 76 aaaac 80
>27538_lla-mir-9:mirbase
Length = 87
Score = 73.8 bits (37), Expect = 2e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 76 aaaac 80
|||||
Sbjct: 76 aaaac 80
>27646_mml-mir-9-2:mirbase
Length = 87
Score = 73.8 bits (37), Expect = 2e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 76 aaaac 80
|||||
Sbjct: 76 aaaac 80
>28168_mne-mir-9:mirbase
Length = 87
Score = 73.8 bits (37), Expect = 2e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 76 aaaac 80
|||||
Sbjct: 76 aaaac 80
>28255_ggo-mir-9:mirbase
Length = 87
Score = 73.8 bits (37), Expect = 2e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 76 aaaac 80
|||||
Sbjct: 76 aaaac 80
>28356_hsa-mir-9-2:mirbase
Length = 87
Score = 73.8 bits (37), Expect = 2e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 76 aaaac 80
|||||
Sbjct: 76 aaaac 80
>30143_ptr-mir-9-2:mirbase
Length = 87
Score = 73.8 bits (37), Expect = 2e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 76 aaaac 80
|||||
Sbjct: 76 aaaac 80
>30747_ppy-mir-9-2:mirbase
Length = 87
Score = 73.8 bits (37), Expect = 2e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 76 aaaac 80
|||||
Sbjct: 76 aaaac 80
>31771_mmu-mir-9-2:mirbase
Length = 72
Score = 73.8 bits (37), Expect = 2e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||
Sbjct: 8 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 67
Query: 76 aaaac 80
|||||
Sbjct: 68 aaaac 72
>32653_rno-mir-9-2:mirbase
Length = 87
Score = 73.8 bits (37), Expect = 2e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 76 aaaac 80
|||||
Sbjct: 76 aaaac 80
>33104_rno-mir-3597-2:mirbase
Length = 118
Score = 73.8 bits (37), Expect = 2e-14
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||
Sbjct: 90 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 31
Query: 76 aaaac 80
|||||
Sbjct: 30 aaaac 26
>33105_rno-mir-3597-2:mirbase
Length = 118
Score = 73.8 bits (37), Expect = 2e-14
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||
Sbjct: 90 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 31
Query: 76 aaaac 80
|||||
Sbjct: 30 aaaac 26
>33125_bta-mir-9-2:mirbase
Length = 87
Score = 73.8 bits (37), Expect = 2e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 76 aaaac 80
|||||
Sbjct: 76 aaaac 80
>33908_ssc-mir-9-2:mirbase
Length = 87
Score = 73.8 bits (37), Expect = 2e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 76 aaaac 80
|||||
Sbjct: 76 aaaac 80
>34865_sko-mir-9:mirbase
Length = 79
Score = 71.9 bits (36), Expect = 7e-14
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 11 ttttctctttggttatctagctgtatgagtgtatgtgatatcataaagctag 62
||||||||||||||||||||||||||||||||| ||| || ||||||||||
Sbjct: 7 ttttctctttggttatctagctgtatgagtgtacatgacattataaagctag 58
>34872_sko-mir-79:mirbase
Length = 101
Score = 71.9 bits (36), Expect = 7e-14
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 11 ttttctctttggttatctagctgtatgagtgtatgtgatatcataaagctag 62
||||||||||||||||||||||||||||||||| ||| || ||||||||||
Sbjct: 19 ttttctctttggttatctagctgtatgagtgtacatgacattataaagctag 70
>27329_mdo-mir-9-1:mirbase
Length = 90
Score = 67.9 bits (34), Expect = 1e-12
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 9 gtttttctctttggttatctagctgtatgagtgt--atgtgatatcataaagctagagaa 66
|||| ||||||||||||||||||||||||||||| || | ||||||||||||||| ||
Sbjct: 9 gtttctctctttggttatctagctgtatgagtgttattgagctatcataaagctagataa 68
Query: 67 ccgaa 71
|||||
Sbjct: 69 ccgaa 73
>34192_dre-mir-9-3:mirbase
Length = 101
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 3 gggttggtttttctctttggttatctagctgtatgagt 40
|||||||||| |||||||||||||||||||||||||||
Sbjct: 6 gggttggtttctctctttggttatctagctgtatgagt 43
>25888_gga-mir-9-2:mirbase
Length = 87
Score = 65.9 bits (33), Expect = 4e-12
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
||||||||||||||||||||||||||| | | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgttttggtcttcataaagctagataaccgaaagta 75
Query: 76 aaaac 80
|||||
Sbjct: 76 aaaac 80
>31422_oan-mir-9-2:mirbase
Length = 68
Score = 65.9 bits (33), Expect = 4e-12
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||
Sbjct: 8 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 67
Query: 76 a 76
|
Sbjct: 68 a 68
>25691_xtr-mir-9a-1:mirbase
Length = 88
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 3 gggttggtttttctctttggttatctagctgtatgagtgt 42
||||||||| || |||||||||||||||||||||||||||
Sbjct: 2 gggttggttgttatctttggttatctagctgtatgagtgt 41
>26619_cfa-mir-9-2:mirbase
Length = 60
Score = 63.9 bits (32), Expect = 2e-11
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaa 71
||||||||||||||||||||||||||||| | ||||||||||||| |||||||
Sbjct: 1 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaa 56
>35275_aga-mir-9a:mirbase
Length = 81
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 13 ttctctttggttatctagctgtatgagtgtat 44
||||||||||||||||||||||||||||||||
Sbjct: 8 ttctctttggttatctagctgtatgagtgtat 39
>26395_tgu-mir-9-2:mirbase
Length = 73
Score = 61.9 bits (31), Expect = 7e-11
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
||||||||||||||||||||||||||| | | ||||||||||||| ||||||| |||
Sbjct: 11 tctttggttatctagctgtatgagtgttttggtcttcataaagctagataaccgaaagta 70
Query: 76 aaa 78
|||
Sbjct: 71 aaa 73
>27645_mml-mir-9-1:mirbase
Length = 89
Score = 61.9 bits (31), Expect = 7e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 3 gggttggtttttctctttggttatctagctgtatgagtg 41
||||||||| || ||||||||||||||||||||||||||
Sbjct: 3 gggttggttgttatctttggttatctagctgtatgagtg 41
>28355_hsa-mir-9-1:mirbase
Length = 89
Score = 61.9 bits (31), Expect = 7e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 3 gggttggtttttctctttggttatctagctgtatgagtg 41
||||||||| || ||||||||||||||||||||||||||
Sbjct: 3 gggttggttgttatctttggttatctagctgtatgagtg 41
>30142_ptr-mir-9-1:mirbase
Length = 88
Score = 61.9 bits (31), Expect = 7e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 3 gggttggtttttctctttggttatctagctgtatgagtg 41
||||||||| || ||||||||||||||||||||||||||
Sbjct: 3 gggttggttgttatctttggttatctagctgtatgagtg 41
>30746_ppy-mir-9-1:mirbase
Length = 89
Score = 61.9 bits (31), Expect = 7e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 3 gggttggtttttctctttggttatctagctgtatgagtg 41
||||||||| || ||||||||||||||||||||||||||
Sbjct: 3 gggttggttgttatctttggttatctagctgtatgagtg 41
>31770_mmu-mir-9-1:mirbase
Length = 89
Score = 61.9 bits (31), Expect = 7e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 3 gggttggtttttctctttggttatctagctgtatgagtg 41
||||||||| || ||||||||||||||||||||||||||
Sbjct: 3 gggttggttgttatctttggttatctagctgtatgagtg 41
>32652_rno-mir-9-1:mirbase
Length = 89
Score = 61.9 bits (31), Expect = 7e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 3 gggttggtttttctctttggttatctagctgtatgagtg 41
||||||||| || ||||||||||||||||||||||||||
Sbjct: 3 gggttggttgttatctttggttatctagctgtatgagtg 41
>33102_rno-mir-3597-1:mirbase
Length = 108
Score = 61.9 bits (31), Expect = 7e-11
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 3 gggttggtttttctctttggttatctagctgtatgagtg 41
||||||||| || ||||||||||||||||||||||||||
Sbjct: 97 gggttggttgttatctttggttatctagctgtatgagtg 59
>33103_rno-mir-3597-1:mirbase
Length = 108
Score = 61.9 bits (31), Expect = 7e-11
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 3 gggttggtttttctctttggttatctagctgtatgagtg 41
||||||||| || ||||||||||||||||||||||||||
Sbjct: 97 gggttggttgttatctttggttatctagctgtatgagtg 59
>33907_ssc-mir-9-1:mirbase
Length = 89
Score = 61.9 bits (31), Expect = 7e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 3 gggttggtttttctctttggttatctagctgtatgagtg 41
||||||||| || ||||||||||||||||||||||||||
Sbjct: 3 gggttggttgttatctttggttatctagctgtatgagtg 41
>34808_spu-mir-9:mirbase
Length = 101
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 ttttctctttggttatctagctgtatgagtg 41
|||||||||||||||||||||||||||||||
Sbjct: 16 ttttctctttggttatctagctgtatgagtg 46
>34817_spu-mir-79:mirbase
Length = 101
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 ttttctctttggttatctagctgtatgagtg 41
|||||||||||||||||||||||||||||||
Sbjct: 17 ttttctctttggttatctagctgtatgagtg 47
>25693_xtr-mir-9b:mirbase
Length = 74
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
|||||||||| |||||||||||||| || | || ||||||||||||| ||||||| |||
Sbjct: 8 tctttggttacctagctgtatgagtataactaatgtcataaagctagacaaccgaacgta 67
Query: 76 aaaacc 81
|||||
Sbjct: 68 taaacc 73
>34538_fru-mir-9-2:mirbase
Length = 72
Score = 60.0 bits (30), Expect = 3e-10
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgat-atcataaagctagagaaccgaatgt 74
||||||||||||||||||||||||||| | || | ||||||||||||| ||||||| ||
Sbjct: 8 tctttggttatctagctgtatgagtgt-tctgctcgtcataaagctagataaccgaaagt 66
Query: 75 aaaaac 80
||||||
Sbjct: 67 aaaaac 72
>34686_tni-mir-9-2:mirbase
Length = 72
Score = 60.0 bits (30), Expect = 3e-10
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgat-atcataaagctagagaaccgaatgt 74
||||||||||||||||||||||||||| | || | ||||||||||||| ||||||| ||
Sbjct: 8 tctttggttatctagctgtatgagtgt-tctgctcgtcataaagctagataaccgaaagt 66
Query: 75 aaaaac 80
||||||
Sbjct: 67 aaaaac 72
>38743_cte-mir-79:mirbase
Length = 101
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 10 tttttctctttggttatctagctgtatga 38
|||||||||||||||||||||||||||||
Sbjct: 17 tttttctctttggttatctagctgtatga 45
>38729_cte-mir-9:mirbase
Length = 101
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 10 tttttctctttggttatctagctgtatga 38
|||||||||||||||||||||||||||||
Sbjct: 15 tttttctctttggttatctagctgtatga 43
>27647_mml-mir-9-3:mirbase
Length = 90
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 9 gtttttctctttggttatctagctgtatgagtg 41
|||| ||||||||||||||||||||||||||||
Sbjct: 9 gtttctctctttggttatctagctgtatgagtg 41
>28357_hsa-mir-9-3:mirbase
Length = 90
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 9 gtttttctctttggttatctagctgtatgagtg 41
|||| ||||||||||||||||||||||||||||
Sbjct: 9 gtttctctctttggttatctagctgtatgagtg 41
>30748_ppy-mir-9-3:mirbase
Length = 90
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 9 gtttttctctttggttatctagctgtatgagtg 41
|||| ||||||||||||||||||||||||||||
Sbjct: 9 gtttctctctttggttatctagctgtatgagtg 41
>31772_mmu-mir-9-3:mirbase
Length = 90
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 9 gtttttctctttggttatctagctgtatgagtg 41
|||| ||||||||||||||||||||||||||||
Sbjct: 9 gtttctctctttggttatctagctgtatgagtg 41
>32654_rno-mir-9-3:mirbase
Length = 90
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 9 gtttttctctttggttatctagctgtatgagtg 41
|||| ||||||||||||||||||||||||||||
Sbjct: 9 gtttctctctttggttatctagctgtatgagtg 41
>33106_rno-mir-3597-3:mirbase
Length = 115
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 9 gtttttctctttggttatctagctgtatgagtg 41
|||| ||||||||||||||||||||||||||||
Sbjct: 96 gtttctctctttggttatctagctgtatgagtg 64
>33107_rno-mir-3597-3:mirbase
Length = 115
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 9 gtttttctctttggttatctagctgtatgagtg 41
|||| ||||||||||||||||||||||||||||
Sbjct: 96 gtttctctctttggttatctagctgtatgagtg 64
>33124_bta-mir-9-1:mirbase
Length = 90
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 9 gtttttctctttggttatctagctgtatgagtg 41
|||| ||||||||||||||||||||||||||||
Sbjct: 9 gtttctctctttggttatctagctgtatgagtg 41
>34194_dre-mir-9-5:mirbase
Length = 87
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtgatatcataaagctagagaaccgaatgta 75
||||||||||||||||||||||||| | | | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtattttgcacttcataaagctagataaccgaaagta 75
Query: 76 aaaac 80
|||||
Sbjct: 76 aaaac 80
>35172_aae-mir-9a-1:mirbase
Length = 81
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 13 ttctctttggttatctagctgtatgagtg 41
|||||||||||||||||||||||||||||
Sbjct: 8 ttctctttggttatctagctgtatgagtg 36
>35173_aae-mir-9a-2:mirbase
Length = 81
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 13 ttctctttggttatctagctgtatgagtg 41
|||||||||||||||||||||||||||||
Sbjct: 8 ttctctttggttatctagctgtatgagtg 36
>25690_xtr-mir-9-3:mirbase
Length = 76
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgta 43
||||||||||||||||||||||||||||
Sbjct: 8 tctttggttatctagctgtatgagtgta 35
>26941_eca-mir-9a:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 6 ttggtttttctctttggttatctagctgtatgagtg 41
|||||| || ||||||||||||||||||||||||||
Sbjct: 1 ttggttgttatctttggttatctagctgtatgagtg 36
>34190_dre-mir-9-1:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 4e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 3 gggttggtttttctctttggttatctagctgtatgagtgt 42
||||||| | || |||||||||||||||||||||||||||
Sbjct: 2 gggttggctgttatctttggttatctagctgtatgagtgt 41
>34195_dre-mir-9-6:mirbase
Length = 88
Score = 56.0 bits (28), Expect = 4e-09
Identities = 58/67 (86%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtg--tatgtgatatcataaagctagagaaccgaatg 73
|||||||||||||||||||||||||| ||| || ||||||||||||| ||||||| |
Sbjct: 15 tctttggttatctagctgtatgagtgtttatctgccttcataaagctagataaccgaaag 74
Query: 74 taaaaac 80
|| ||||
Sbjct: 75 tagaaac 81
>35000_dpu-mir-9:mirbase
Length = 101
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 ttttctctttggttatctagctgtatgagtgt 42
|||| |||||||||||||||||||||||||||
Sbjct: 16 ttttttctttggttatctagctgtatgagtgt 47
>35007_dpu-mir-79:mirbase
Length = 101
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 ttttctctttggttatctagctgtatgagtgt 42
|||| |||||||||||||||||||||||||||
Sbjct: 18 ttttttctttggttatctagctgtatgagtgt 49
>37562_lmi-mir-9a:mirbase
Length = 61
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgtatgtg 47
|||||||||||||||||||||||||| |||||
Sbjct: 1 tctttggttatctagctgtatgagtgcatgtg 32
>25422_pma-mir-9a-1:mirbase
Length = 88
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgt 42
|||||||||||||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagtgt 41
>25423_pma-mir-9a-2:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgt 42
|||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtgt 42
>25424_pma-mir-9b:mirbase
Length = 88
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 16 tctttggttatctagctgtatgagtgt 42
|||||||||||||||||||||||||||
Sbjct: 74 tctttggttatctagctgtatgagtgt 48
>26394_tgu-mir-9-1:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgt 42
|||||||||||||||||||||||||||
Sbjct: 11 tctttggttatctagctgtatgagtgt 37
>34191_dre-mir-9-2:mirbase
Length = 136
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgt 42
|||||||||||||||||||||||||||
Sbjct: 42 tctttggttatctagctgtatgagtgt 68
>34539_fru-mir-9-3:mirbase
Length = 82
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgt 42
|||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtgt 42
>34687_tni-mir-9-3:mirbase
Length = 82
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgt 42
|||||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagtgt 42
>35048_api-mir-9a:mirbase
Length = 67
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgt 42
|||||||||||||||||||||||||||
Sbjct: 1 tctttggttatctagctgtatgagtgt 27
>38861_lgi-mir-79:mirbase
Length = 101
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 9 gtttttctctttggttatctagctgtatga 38
|||||| |||||||||||||||||||||||
Sbjct: 15 gtttttgtctttggttatctagctgtatga 44
>38852_lgi-mir-9:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 9 gtttttctctttggttatctagctgtatga 38
|||||| |||||||||||||||||||||||
Sbjct: 14 gtttttgtctttggttatctagctgtatga 43
>26618_cfa-mir-9-1:mirbase
Length = 62
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtg 41
||||||||||||||||||||||||||
Sbjct: 1 tctttggttatctagctgtatgagtg 26
>26620_cfa-mir-9-3:mirbase
Length = 61
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtg 41
||||||||||||||||||||||||||
Sbjct: 1 tctttggttatctagctgtatgagtg 26
>34537_fru-mir-9-1:mirbase
Length = 87
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtg 41
||||||||||||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagtg 40
>34685_tni-mir-9-1:mirbase
Length = 95
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtg 41
||||||||||||||||||||||||||
Sbjct: 19 tctttggttatctagctgtatgagtg 44
>34967_isc-mir-79:mirbase
Length = 101
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtg 41
||||||||||||||||||||||||||
Sbjct: 24 tctttggttatctagctgtatgagtg 49
>36088_dan-mir-9a:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtg 41
||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtg 35
>36166_der-mir-9a:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtg 41
||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtg 35
>36254_dgr-mir-9a:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtg 41
||||||||||||||||||||||||||
Sbjct: 9 tctttggttatctagctgtatgagtg 34
>36347_dme-mir-9a:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtg 41
||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtg 35
>36348_dme-mir-9a:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtg 41
||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtg 35
>36764_dmo-mir-9a:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtg 41
||||||||||||||||||||||||||
Sbjct: 9 tctttggttatctagctgtatgagtg 34
>36837_dpe-mir-9a:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtg 41
||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtg 35
>36913_dps-mir-9a:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtg 41
||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtg 35
>37126_dse-mir-9a:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtg 41
||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtg 35
>37204_dsi-mir-9a:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtg 41
||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtg 35
>37340_dvi-mir-9a:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtg 41
||||||||||||||||||||||||||
Sbjct: 9 tctttggttatctagctgtatgagtg 34
>37415_dwi-mir-9a:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtg 41
||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtg 35
>37494_dya-mir-9a-1:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtg 41
||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtg 35
>37495_dya-mir-9a-2:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtg 41
||||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagtg 35
>38597_ppc-mir-9:mirbase
Length = 105
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 tctctttggttatctagctgtatga 38
|||||||||||||||||||||||||
Sbjct: 27 tctctttggttatctagctgtatga 51
>35345_ame-mir-9a:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagt 40
|||||||||||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagt 39
>35519_bmo-mir-9a:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagt 40
|||||||||||||||||||||||||
Sbjct: 18 tctttggttatctagctgtatgagt 42
>37571_ngi-mir-9a:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagt 40
|||||||||||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagt 39
>37603_nlo-mir-9a:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagt 40
|||||||||||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagt 39
>37636_nvi-mir-9a:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagt 40
|||||||||||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagt 39
>37697_tca-mir-9a:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagt 40
|||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagt 34
>37698_tca-mir-9a:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagt 40
|||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagt 34
>24646_bfl-mir-9-1:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgag 39
||||||||||||||||||||||||
Sbjct: 7 tctttggttatctagctgtatgag 30
>24647_bfl-mir-9-1:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgag 39
||||||||||||||||||||||||
Sbjct: 7 tctttggttatctagctgtatgag 30
>24648_bfl-mir-9-2:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgag 39
||||||||||||||||||||||||
Sbjct: 6 tctttggttatctagctgtatgag 29
>24649_bfl-mir-9-2:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgag 39
||||||||||||||||||||||||
Sbjct: 6 tctttggttatctagctgtatgag 29
>38099_bma-mir-9:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 ctttggttatctagctgtatgagt 40
||||||||||||||||||||||||
Sbjct: 15 ctttggttatctagctgtatgagt 38
>38107_bma-mir-79:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 ctttggttatctagctgtatgagt 40
||||||||||||||||||||||||
Sbjct: 15 ctttggttatctagctgtatgagt 38
>39067_sme-mir-9a:mirbase
Length = 105
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgagtgta 43
||||||||| ||||||||||||| ||||
Sbjct: 21 tctttggttttctagctgtatgattgta 48
>38938_emu-mir-9:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgag 39
||||||||||||||||||| ||||
Sbjct: 11 tctttggttatctagctgtgtgag 34
>38915_egr-mir-9:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tctttggttatctagctgtatgag 39
||||||||||||||||||| ||||
Sbjct: 11 tctttggttatctagctgtgtgag 34
