miRNEST 2.0, an integrative microRNA resource :: BLAST
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 77.8 bits (39), Expect = 2e-15
Identities = 79/90 (87%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 23 tgttgttgacagaagatagagagcaccaacgatgaagttgcaa--actttgcatctcact 80
|||||||||||||||||||||||||| | ||||| || ||| | |||||||||||||
Sbjct: 6 tgttgttgacagaagatagagagcacagatgatgatgt-gcatggagtttgcatctcact 64
Query: 81 cctttgtactctctatacttctgtcatcac 110
||||||| ||||||| ||||||||||||||
Sbjct: 65 cctttgtgctctctagacttctgtcatcac 94
>40337_rco-MIR156h:mirbase
Length = 97
Score = 67.9 bits (34), Expect = 2e-12
Identities = 81/94 (86%), Gaps = 7/94 (7%)
Strand = Plus / Plus
Query: 23 tgttgttgacagaagatagagagcaccaacgatgaagttgcaa--acttt----gcatct 76
|||||||||||||||||||||||||| | ||||| || |||| ||||| ||||||
Sbjct: 1 tgttgttgacagaagatagagagcacagatgatgatgt-gcaatgactttttctgcatct 59
Query: 77 cactcctttgtactctctatacttctgtcatcac 110
||||||||||| |||||||| |||||||||||||
Sbjct: 60 cactcctttgtgctctctatgcttctgtcatcac 93
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 65.9 bits (33), Expect = 7e-12
Identities = 78/91 (85%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 23 tgttgttgacagaagatagagagcaccaacgatgaagttgcaa---actttgcatctcac 79
|||||||||||||||||||||||||| | ||||| | |||| ||| |||||| |||
Sbjct: 6 tgttgttgacagaagatagagagcacagatgatgatat-gcaatggactctgcatcccac 64
Query: 80 tcctttgtactctctatacttctgtcatcac 110
|||||||| |||||||| |||||||||||||
Sbjct: 65 tcctttgtgctctctatgcttctgtcatcac 95
>40428_gma-MIR156d:mirbase
Length = 151
Score = 65.9 bits (33), Expect = 7e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 70 tgcatctcactcctttgtactctctatacttctgtcatcac 110
||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 95 tgcatcttactcctttgtgctctctatacttctgtcatcac 135
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcac 48
|||||||||||||||||||||||||
Sbjct: 17 gttgttgacagaagatagagagcac 41
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 71 gcatctcactcctttgtactctctatacttctgtcatcac 110
||||||||||||||||| |||||||| |||||||||||||
Sbjct: 55 gcatctcactcctttgtgctctctattcttctgtcatcac 94
>41163_aqc-MIR156b:mirbase
Length = 83
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 70 tgcatctcactcctttgtactctctatacttctgtcatc 108
|||||||||||||||||| |||||||| |||||||||||
Sbjct: 45 tgcatctcactcctttgtgctctctatgcttctgtcatc 83
>41295_ptc-MIR156h:mirbase
Length = 103
Score = 60.0 bits (30), Expect = 4e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 69 ttgcatctcactcctttgtactctctatacttctgtcatcac 110
||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 57 ttgcatctcactcctttgtgctctctagtcttctgtcatcac 98
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 60.0 bits (30), Expect = 4e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 69 ttgcatctcactcctttgtactctctatacttctgtcatcac 110
||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 57 ttgcatctcactcctttgtgctctctagtcttctgtcatcac 98
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 23 tgttgttgacagaagatagagagcac 48
||||||||||||||||||||||||||
Sbjct: 6 tgttgttgacagaagatagagagcac 31
>40336_rco-MIR156g:mirbase
Length = 97
Score = 60.0 bits (30), Expect = 4e-10
Identities = 78/93 (83%), Gaps = 7/93 (7%)
Strand = Plus / Plus
Query: 23 tgttgttgacagaagatagagagcaccaacgatgaagttgca------aactttgcatct 76
|||||||||||||||||||||||||| |||||||| |||| ||| |||||||
Sbjct: 1 tgttgttgacagaagatagagagcactgacgatgaa-atgcatgatgggactctgcatct 59
Query: 77 cactcctttgtactctctatacttctgtcatca 109
||||||||||| ||||||| ||||||||||||
Sbjct: 60 cactcctttgtgctctctagtcttctgtcatca 92
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 70 tgcatctcactcctttgtactctctatacttctgtcatcac 110
||||| |||||||||||| |||||||| |||||||||||||
Sbjct: 64 tgcatttcactcctttgtgctctctattcttctgtcatcac 104
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 70 tgcatctcactcctttgtactctctatacttctgtcatcac 110
||||| |||||||||||| |||||||| |||||||||||||
Sbjct: 131 tgcatatcactcctttgtgctctctatgcttctgtcatcac 171
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcac 48
|||||||||||||||||||||||||
Sbjct: 2 gttgttgacagaagatagagagcac 26
>41077_gra-MIR157b:mirbase
Length = 91
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 70 tgcatctcactcctttgtactctctatacttctgtcatca 109
|||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 50 tgcatcccactcctttgtgctctctatgcttctgtcatca 89
>40011_ath-MIR157b:mirbase
Length = 132
Score = 56.0 bits (28), Expect = 7e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 67 ctttgcatctcactcctttgtactctctatacttctgtcatcac 110
|||||||||| |||||||||| ||||||| |||||||||||||
Sbjct: 69 ctttgcatcttactcctttgtgctctctagccttctgtcatcac 112
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 tgttgacagaagatagagagcac 48
|||||||||||||||||||||||
Sbjct: 17 tgttgacagaagatagagagcac 39
>40010_ath-MIR157a:mirbase
Length = 98
Score = 56.0 bits (28), Expect = 7e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 67 ctttgcatctcactcctttgtactctctatacttctgtcatcac 110
|||||||||| |||||||||| ||||||| |||||||||||||
Sbjct: 54 ctttgcatcttactcctttgtgctctctagccttctgtcatcac 97
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 tgttgacagaagatagagagcac 48
|||||||||||||||||||||||
Sbjct: 2 tgttgacagaagatagagagcac 24
>39799_aly-MIR157b:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 7e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 67 ctttgcatctcactcctttgtactctctatacttctgtcatcac 110
|||||||||| |||||||||| ||||||| |||||||||||||
Sbjct: 54 ctttgcatcttactcctttgtgctctctaagcttctgtcatcac 97
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 tgttgacagaagatagagagcac 48
|||||||||||||||||||||||
Sbjct: 2 tgttgacagaagatagagagcac 24
>39798_aly-MIR157a:mirbase
Length = 123
Score = 56.0 bits (28), Expect = 7e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 67 ctttgcatctcactcctttgtactctctatacttctgtcatcac 110
|||||||||| |||||||||| ||||||| |||||||||||||
Sbjct: 66 ctttgcatcttactcctttgtgctctctagccttctgtcatcac 109
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 tgttgacagaagatagagagcac 48
|||||||||||||||||||||||
Sbjct: 14 tgttgacagaagatagagagcac 36
>40429_gma-MIR156e:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 71 gcatctcactcctttgtactctctatacttctgtcatca 109
||||||||||||||||| ||||||| ||||||||||||
Sbjct: 69 gcatctcactcctttgtgctctctagtcttctgtcatca 107
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 tgttgacagaagatagagagcac 48
|||||||||||||||||||||||
Sbjct: 19 tgttgacagaagatagagagcac 41
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 23 tgttgttgacagaagatagagagcac 48
||||||||||||||||||||||||||
Sbjct: 6 tgttgttgacagaagatagagagcac 31
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 73 atctcactcctttgtactctctatacttctgtcatcac 110
||||||||||||||| |||||||| |||||| ||||||
Sbjct: 58 atctcactcctttgtgctctctatgcttctgccatcac 95
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcaccaacgatga 57
||||||||||||||||||||||||| || |||||
Sbjct: 19 gttgttgacagaagatagagagcacaaaagatga 52
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcaccaacgatga 57
||||||||||||||||||||||||| || |||||
Sbjct: 19 gttgttgacagaagatagagagcacaaaagatga 52
>40310_bra-MIR157a:mirbase
Length = 149
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcaccaacgatga 57
||||||||||||||||||||||||| || |||||
Sbjct: 10 gttgttgacagaagatagagagcactaaggatga 43
>40304_bol-MIR157a:mirbase
Length = 106
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcaccaacgatga 57
||||||||||||||||||||||||| || |||||
Sbjct: 2 gttgttgacagaagatagagagcactaaggatga 35
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 78 actcctttgtactctctatacttctgtca 106
|||| ||||| ||||||||||||||||||
Sbjct: 73 actcttttgtgctctctatacttctgtca 101
>40260_bna-MIR156c:mirbase
Length = 155
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcaccaacgatga 57
||||||||||||||||||||||||| || |||||
Sbjct: 14 gttgttgacagaagatagagagcactaaggatga 47
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 78 actcctttgtactctctatacttctgtca 106
|||| ||||| ||||||||||||||||||
Sbjct: 109 actcttttgtgctctctatacttctgtca 137
>40259_bna-MIR156b:mirbase
Length = 208
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcaccaacgatga 57
||||||||||||||||||||||||| || |||||
Sbjct: 21 gttgttgacagaagatagagagcactaaggatga 54
>40012_ath-MIR157c:mirbase
Length = 217
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcaccaacgatga 57
||||||||||||||||||||||||| || |||||
Sbjct: 20 gttgttgacagaagatagagagcactaaggatga 53
Score = 44.1 bits (22), Expect = 3e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 70 tgcatctc-actcctttgtactctctatacttctgtca 106
|||||||| |||| ||||| ||||||||||||||||||
Sbjct: 151 tgcatctctactcttttgtgctctctatacttctgtca 188
>39800_aly-MIR157c:mirbase
Length = 293
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcaccaacgatga 57
||||||||||||||||||||||||| || |||||
Sbjct: 51 gttgttgacagaagatagagagcactaaggatga 84
Score = 44.1 bits (22), Expect = 3e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 70 tgcatctc-actcctttgtactctctatacttctgtca 106
|||||||| |||| ||||| ||||||||||||||||||
Sbjct: 202 tgcatctctactcttttgtgctctctatacttctgtca 239
>41076_gra-MIR157a:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcac 48
|||||||||||||||||||||||||
Sbjct: 1 gttgttgacagaagatagagagcac 25
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 70 tgcatctcactcctttgtactctctatacttctgtcatcac 110
|||||| ||||||||||| |||| ||| |||||||||||||
Sbjct: 60 tgcatcccactcctttgtgctctttatgcttctgtcatcac 100
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 25 ttgttgacagaagatagagagcac 48
||||||||||||||||||||||||
Sbjct: 18 ttgttgacagaagatagagagcac 41
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 71 gcatctcactcctttgtactctctatacttctgtcatcac 110
|||||||| |||||||| |||| ||| |||||||||||||
Sbjct: 54 gcatctcattcctttgtgctctttattcttctgtcatcac 93
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 tgttgacagaagatagagagcac 48
|||||||||||||||||||||||
Sbjct: 4 tgttgacagaagatagagagcac 26
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 25 ttgttgacagaagatagagagcac 48
||||||||||||||||||||||||
Sbjct: 3 ttgttgacagaagatagagagcac 26
>40431_gma-MIR156g:mirbase
Length = 118
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 25 ttgttgacagaagatagagagcac 48
||||||||||||||||||||||||
Sbjct: 21 ttgttgacagaagatagagagcac 44
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 28 ttgacagaagatagagagcac 48
|||||||||||||||||||||
Sbjct: 107 ttgacagaagatagagagcac 87
>40335_rco-MIR156f:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 25 ttgttgacagaagatagagagcac 48
||||||||||||||||||||||||
Sbjct: 3 ttgttgacagaagatagagagcac 26
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 tgttgacagaagatagagagcac 48
|||||||||||||||||||||||
Sbjct: 9 tgttgacagaagatagagagcac 31
>40654_mtr-MIR156g:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 80 tcctttgtactctctatacttctgtcatcac 110
|||||||| ||||||| ||||||||||||||
Sbjct: 89 tcctttgtgctctctagacttctgtcatcac 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcaccaacgatga 57
|||||||||||||||||||| |||| || |||||
Sbjct: 2 gttgttgacagaagatagagggcactaaggatga 35
>40427_gma-MIR156c:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 tgttgacagaagatagagagcac 48
|||||||||||||||||||||||
Sbjct: 144 tgttgacagaagatagagagcac 166
>41525_sly-MIR156a:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 28 ttgacagaagatagagagcaccaacgatga 57
||||||||||||||||||||| || |||||
Sbjct: 1 ttgacagaagatagagagcactaatgatga 30
>39801_aly-MIR157d:mirbase
Length = 256
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcaccaacgatga 57
|||| |||||||||||||||||||| || |||||
Sbjct: 33 gttgctgacagaagatagagagcactaaggatga 66
>41527_sly-MIR156c:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 28 ttgacagaagatagagagcac 48
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>41526_sly-MIR156b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 28 ttgacagaagatagagagcac 48
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>40013_ath-MIR157d:mirbase
Length = 221
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcac 48
|||| ||||||||||||||||||||
Sbjct: 19 gttgctgacagaagatagagagcac 43
>41162_aqc-MIR156a:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagatagagagcac 48
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
>39727_smo-MIR156b:mirbase
Length = 112
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagatagagagcac 48
||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcac 31
>39416_pta-MIR156b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagatagagagcac 48
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
>39415_pta-MIR156a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagatagagagcac 48
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
