miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28259_ggo-mir-15b:mirbase
Length = 98
Score = 133 bits (67), Expect = 2e-32
Identities = 85/91 (93%)
Strand = Plus / Plus
Query: 1 tgaggccttaaagtactctagcagcacatcatggtttgcatgctgtagtgaagatgcgaa 60
||||||||||||||||| ||||||||||||||||||| |||||| ||| ||||||||||
Sbjct: 2 tgaggccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcgaa 61
Query: 61 tcattatttgctgctttagaaatttaaggaa 91
||||||||||||||| |||||||||||||||
Sbjct: 62 tcattatttgctgctctagaaatttaaggaa 92
>28361_hsa-mir-15b:mirbase
Length = 98
Score = 133 bits (67), Expect = 2e-32
Identities = 85/91 (93%)
Strand = Plus / Plus
Query: 1 tgaggccttaaagtactctagcagcacatcatggtttgcatgctgtagtgaagatgcgaa 60
||||||||||||||||| ||||||||||||||||||| |||||| ||| ||||||||||
Sbjct: 2 tgaggccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcgaa 61
Query: 61 tcattatttgctgctttagaaatttaaggaa 91
||||||||||||||| |||||||||||||||
Sbjct: 62 tcattatttgctgctctagaaatttaaggaa 92
>30043_ppa-mir-15b:mirbase
Length = 98
Score = 133 bits (67), Expect = 2e-32
Identities = 85/91 (93%)
Strand = Plus / Plus
Query: 1 tgaggccttaaagtactctagcagcacatcatggtttgcatgctgtagtgaagatgcgaa 60
||||||||||||||||| ||||||||||||||||||| |||||| ||| ||||||||||
Sbjct: 2 tgaggccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcgaa 61
Query: 61 tcattatttgctgctttagaaatttaaggaa 91
||||||||||||||| |||||||||||||||
Sbjct: 62 tcattatttgctgctctagaaatttaaggaa 92
>30147_ptr-mir-15b:mirbase
Length = 98
Score = 133 bits (67), Expect = 2e-32
Identities = 85/91 (93%)
Strand = Plus / Plus
Query: 1 tgaggccttaaagtactctagcagcacatcatggtttgcatgctgtagtgaagatgcgaa 60
||||||||||||||||| ||||||||||||||||||| |||||| ||| ||||||||||
Sbjct: 2 tgaggccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcgaa 61
Query: 61 tcattatttgctgctttagaaatttaaggaa 91
||||||||||||||| |||||||||||||||
Sbjct: 62 tcattatttgctgctctagaaatttaaggaa 92
>30752_ppy-mir-15b:mirbase
Length = 98
Score = 133 bits (67), Expect = 2e-32
Identities = 85/91 (93%)
Strand = Plus / Plus
Query: 1 tgaggccttaaagtactctagcagcacatcatggtttgcatgctgtagtgaagatgcgaa 60
||||||||||||||||| ||||||||||||||||||| |||||| ||| ||||||||||
Sbjct: 2 tgaggccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcgaa 61
Query: 61 tcattatttgctgctttagaaatttaaggaa 91
||||||||||||||| |||||||||||||||
Sbjct: 62 tcattatttgctgctctagaaatttaaggaa 92
>27479_age-mir-15b:mirbase
Length = 98
Score = 125 bits (63), Expect = 6e-30
Identities = 84/91 (92%)
Strand = Plus / Plus
Query: 1 tgaggccttaaagtactctagcagcacatcatggtttgcatgctgtagtgaagatgcgaa 60
||||||||||||||||| ||||||||||||||||||| ||| || ||| ||||||||||
Sbjct: 2 tgaggccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaa 61
Query: 61 tcattatttgctgctttagaaatttaaggaa 91
||||||||||||||| |||||||||||||||
Sbjct: 62 tcattatttgctgctctagaaatttaaggaa 92
>27540_lla-mir-15b:mirbase
Length = 98
Score = 125 bits (63), Expect = 6e-30
Identities = 84/91 (92%)
Strand = Plus / Plus
Query: 1 tgaggccttaaagtactctagcagcacatcatggtttgcatgctgtagtgaagatgcgaa 60
||||||||||||||||| ||||||||||||||||||| ||| || ||| ||||||||||
Sbjct: 2 tgaggccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaa 61
Query: 61 tcattatttgctgctttagaaatttaaggaa 91
||||||||||||||| |||||||||||||||
Sbjct: 62 tcattatttgctgctctagaaatttaaggaa 92
>27651_mml-mir-15b:mirbase
Length = 98
Score = 125 bits (63), Expect = 6e-30
Identities = 84/91 (92%)
Strand = Plus / Plus
Query: 1 tgaggccttaaagtactctagcagcacatcatggtttgcatgctgtagtgaagatgcgaa 60
||||||||||||||||| ||||||||||||||||||| ||| || ||| ||||||||||
Sbjct: 2 tgaggccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaa 61
Query: 61 tcattatttgctgctttagaaatttaaggaa 91
||||||||||||||| |||||||||||||||
Sbjct: 62 tcattatttgctgctctagaaatttaaggaa 92
>28171_mne-mir-15b:mirbase
Length = 98
Score = 125 bits (63), Expect = 6e-30
Identities = 84/91 (92%)
Strand = Plus / Plus
Query: 1 tgaggccttaaagtactctagcagcacatcatggtttgcatgctgtagtgaagatgcgaa 60
||||||||||||||||| ||||||||||||||||||| ||| || ||| ||||||||||
Sbjct: 2 tgaggccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaa 61
Query: 61 tcattatttgctgctttagaaatttaaggaa 91
||||||||||||||| |||||||||||||||
Sbjct: 62 tcattatttgctgctctagaaatttaaggaa 92
>33129_bta-mir-15b:mirbase
Length = 98
Score = 117 bits (59), Expect = 1e-27
Identities = 83/91 (91%)
Strand = Plus / Plus
Query: 1 tgaggccttaaagtactctagcagcacatcatggtttgcatgctgtagtgaagatgcgaa 60
|||| |||||||||||| ||||||||||||||||||| ||| || ||| ||||||||||
Sbjct: 2 tgagaccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaa 61
Query: 61 tcattatttgctgctttagaaatttaaggaa 91
||||||||||||||| |||||||||||||||
Sbjct: 62 tcattatttgctgctctagaaatttaaggaa 92
>33912_ssc-mir-15b:mirbase
Length = 98
Score = 117 bits (59), Expect = 1e-27
Identities = 83/91 (91%)
Strand = Plus / Plus
Query: 1 tgaggccttaaagtactctagcagcacatcatggtttgcatgctgtagtgaagatgcgaa 60
||||||||||||||||| ||||||||||||||||||| ||| || | | ||||||||||
Sbjct: 2 tgaggccttaaagtactgtagcagcacatcatggtttacatactacaatcaagatgcgaa 61
Query: 61 tcattatttgctgctttagaaatttaaggaa 91
||||||||||||||| |||||||||||||||
Sbjct: 62 tcattatttgctgctctagaaatttaaggaa 92
>32658_rno-mir-15b:mirbase
Length = 98
Score = 115 bits (58), Expect = 6e-27
Identities = 79/86 (91%)
Strand = Plus / Plus
Query: 6 ccttaaagtactctagcagcacatcatggtttgcatgctgtagtgaagatgcgaatcatt 65
|||||||||||| ||||||||||||||||||| ||| || ||| |||||||||||||||
Sbjct: 7 ccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcatt 66
Query: 66 atttgctgctttagaaatttaaggaa 91
|||||||||| |||||||||||||||
Sbjct: 67 atttgctgctctagaaatttaaggaa 92
>31426_oan-mir-15b:mirbase
Length = 130
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 19 tagcagcacatcatggtttgcatgctgtagtgaagatgcgaatcattatttgctgcttta 78
|||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||
Sbjct: 31 tagcagcacatcatggtttgcatggtatagccaagatgcgaatcattatttgctgcttta 90
Query: 79 gaaatttaaggaa 91
|||||||||||||
Sbjct: 91 gaaatttaaggaa 103
>26624_cfa-mir-15b:mirbase
Length = 60
Score = 73.8 bits (37), Expect = 2e-14
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 19 tagcagcacatcatggtttgcatgctgtagtgaagatgcgaatcattatttgctgct 75
||||||||||||||||||| ||| || ||| |||||||||||||||||||||||||
Sbjct: 1 tagcagcacatcatggtttacatactacagtcaagatgcgaatcattatttgctgct 57
>26946_eca-mir-15b:mirbase
Length = 64
Score = 73.8 bits (37), Expect = 2e-14
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 19 tagcagcacatcatggtttgcatgctgtagtgaagatgcgaatcattatttgctgct 75
||||||||||||||||||| ||| || ||| |||||||||||||||||||||||||
Sbjct: 4 tagcagcacatcatggtttacatactacagtcaagatgcgaatcattatttgctgct 60
>31776_mmu-mir-15b:mirbase
Length = 64
Score = 73.8 bits (37), Expect = 2e-14
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 19 tagcagcacatcatggtttgcatgctgtagtgaagatgcgaatcattatttgctgct 75
||||||||||||||||||| ||| || ||| |||||||||||||||||||||||||
Sbjct: 4 tagcagcacatcatggtttacatactacagtcaagatgcgaatcattatttgctgct 60
>25698_xtr-mir-15b:mirbase
Length = 88
Score = 60.0 bits (30), Expect = 3e-10
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 19 tagcagcacatcatggtttgcatgctgtagtgaagatgcgaatcattatttgctgctt 76
||||||||||||||| ||||||||||||| | |||| | ||||||| ||||||||||
Sbjct: 16 tagcagcacatcatgatttgcatgctgtattatagattctaatcattttttgctgctt 73
>26397_tgu-mir-15b:mirbase
Length = 71
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 tagcagcacatcatggtttgcatgct 44
||||||||||||||||||||||||||
Sbjct: 11 tagcagcacatcatggtttgcatgct 36
>25655_xla-mir-15c:mirbase
Length = 74
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tctagcagcacatcatggtttg 38
||||||||||||||||||||||
Sbjct: 12 tctagcagcacatcatggtttg 33
>25699_xtr-mir-15c:mirbase
Length = 74
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tctagcagcacatcatggtttg 38
||||||||||||||||||||||
Sbjct: 12 tctagcagcacatcatggtttg 33
>34694_tni-mir-15b:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 66 atttgctgctttagaaatttaaggaa 91
|||||||||||||||| |||||||||
Sbjct: 66 atttgctgctttagaattttaaggaa 91
>25893_gga-mir-15c:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 tagcagcacatcatggtttg 38
||||||||||||||||||||
Sbjct: 11 tagcagcacatcatggtttg 30
>26398_tgu-mir-15c:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 tagcagcacatcatggtttg 38
||||||||||||||||||||
Sbjct: 14 tagcagcacatcatggtttg 33
>31427_oan-mir-15c:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 tagcagcacatcatggtttg 38
||||||||||||||||||||
Sbjct: 28 tagcagcacatcatggtttg 47
>34204_dre-mir-15b:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 tagcagcacatcatggtttg 38
||||||||||||||||||||
Sbjct: 39 tagcagcacatcatggtttg 58