miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26398_tgu-mir-15c:mirbase
Length = 82
Score = 151 bits (76), Expect = 8e-38
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 1 tgaggagatgtagcagcacatcatggtttgtagggacaaggagatacagaccattctggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tgaggagatgtagcagcacatcatggtttgtagggacaaggagatacagaccattctggg 63
Query: 61 ctgcctcattacctca 76
||||||||||||||||
Sbjct: 64 ctgcctcattacctca 79
>31427_oan-mir-15c:mirbase
Length = 116
Score = 119 bits (60), Expect = 3e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 9 tgtagcagcacatcatggtttgtagggacaaggagatacagaccattctgggctgcctca 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26 tgtagcagcacatcatggtttgtagggacaaggagatacagaccattctgggctgcctca 85
>25655_xla-mir-15c:mirbase
Length = 74
Score = 93.7 bits (47), Expect = 2e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 1 tgaggagatgtagcagcacatcatggtttgtagggacaaggagatacagaccattctggg 60
||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 4 tgaggtgatctagcagcacatcatggtttgtagaaacaaggagatacagaccattctgag 63
Query: 61 ctgcctc 67
|||||||
Sbjct: 64 ctgcctc 70
>25699_xtr-mir-15c:mirbase
Length = 74
Score = 93.7 bits (47), Expect = 2e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 1 tgaggagatgtagcagcacatcatggtttgtagggacaaggagatacagaccattctggg 60
||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 4 tgaggtgatctagcagcacatcatggtttgtagaaacaaggagatacagaccattctgag 63
Query: 61 ctgcctc 67
|||||||
Sbjct: 64 ctgcctc 70
>34204_dre-mir-15b:mirbase
Length = 134
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tgtagcagcacatcatggtttgta 32
||||||||||||||||||||||||
Sbjct: 37 tgtagcagcacatcatggtttgta 60
>26397_tgu-mir-15b:mirbase
Length = 71
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgtagcagcacatcatggtttg 30
||||||||||||||||||||||
Sbjct: 9 tgtagcagcacatcatggtttg 30
>26946_eca-mir-15b:mirbase
Length = 64
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgtagcagcacatcatggttt 29
|||||||||||||||||||||
Sbjct: 2 tgtagcagcacatcatggttt 22
>27479_age-mir-15b:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgtagcagcacatcatggttt 29
|||||||||||||||||||||
Sbjct: 18 tgtagcagcacatcatggttt 38
>27540_lla-mir-15b:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgtagcagcacatcatggttt 29
|||||||||||||||||||||
Sbjct: 18 tgtagcagcacatcatggttt 38
>27651_mml-mir-15b:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgtagcagcacatcatggttt 29
|||||||||||||||||||||
Sbjct: 18 tgtagcagcacatcatggttt 38
>28171_mne-mir-15b:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgtagcagcacatcatggttt 29
|||||||||||||||||||||
Sbjct: 18 tgtagcagcacatcatggttt 38
>28259_ggo-mir-15b:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgtagcagcacatcatggttt 29
|||||||||||||||||||||
Sbjct: 18 tgtagcagcacatcatggttt 38
>28361_hsa-mir-15b:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgtagcagcacatcatggttt 29
|||||||||||||||||||||
Sbjct: 18 tgtagcagcacatcatggttt 38
>30043_ppa-mir-15b:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgtagcagcacatcatggttt 29
|||||||||||||||||||||
Sbjct: 18 tgtagcagcacatcatggttt 38
>30147_ptr-mir-15b:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgtagcagcacatcatggttt 29
|||||||||||||||||||||
Sbjct: 18 tgtagcagcacatcatggttt 38
>30752_ppy-mir-15b:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgtagcagcacatcatggttt 29
|||||||||||||||||||||
Sbjct: 18 tgtagcagcacatcatggttt 38
>31776_mmu-mir-15b:mirbase
Length = 64
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgtagcagcacatcatggttt 29
|||||||||||||||||||||
Sbjct: 2 tgtagcagcacatcatggttt 22
>32658_rno-mir-15b:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgtagcagcacatcatggttt 29
|||||||||||||||||||||
Sbjct: 18 tgtagcagcacatcatggttt 38
>33129_bta-mir-15b:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgtagcagcacatcatggttt 29
|||||||||||||||||||||
Sbjct: 18 tgtagcagcacatcatggttt 38
>33912_ssc-mir-15b:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgtagcagcacatcatggttt 29
|||||||||||||||||||||
Sbjct: 18 tgtagcagcacatcatggttt 38
>25892_gga-mir-15b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tagcagcacatcatggtttg 30
||||||||||||||||||||
Sbjct: 19 tagcagcacatcatggtttg 38
>31426_oan-mir-15b:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tagcagcacatcatggtttg 30
||||||||||||||||||||
Sbjct: 31 tagcagcacatcatggtttg 50
>26624_cfa-mir-15b:mirbase
Length = 60
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 11 tagcagcacatcatggttt 29
|||||||||||||||||||
Sbjct: 1 tagcagcacatcatggttt 19
