miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>27691_mml-mir-34a:mirbase
          Length = 110

 Score =  192 bits (97), Expect = 4e-50
 Identities = 107/109 (98%), Gaps = 1/109 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatagttaagg 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatag-taagg 60

                                                            
Query: 61  aagcaatcagcaagtatactgccctagaagtgctacacattgttgggcc 109
           ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61  aagcaatcagcaagtatactgccctagaagtgctacacattgtggggcc 109




>28197_mne-mir-34a:mirbase
          Length = 110

 Score =  192 bits (97), Expect = 4e-50
 Identities = 107/109 (98%), Gaps = 1/109 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatagttaagg 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatag-taagg 60

                                                            
Query: 61  aagcaatcagcaagtatactgccctagaagtgctacacattgttgggcc 109
           ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61  aagcaatcagcaagtatactgccctagaagtgctacacattgtggggcc 109




>27557_lla-mir-34a:mirbase
          Length = 111

 Score =  184 bits (93), Expect = 9e-48
 Identities = 105/109 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatagttaagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatagtgaagg 61

                                                            
Query: 61  aagcaatcagcaagtatactgccctagaagtgctacacattgttgggcc 109
           |||||||||||||||||||||||||||||||||| ||| |||| |||||
Sbjct: 62  aagcaatcagcaagtatactgccctagaagtgctgcacgttgtggggcc 110




>27360_mdo-mir-34a:mirbase
          Length = 111

 Score =  176 bits (89), Expect = 2e-45
 Identities = 104/109 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatagttaagg 60
           |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 2   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagtaatagataagg 61

                                                            
Query: 61  aagcaatcagcaagtatactgccctagaagtgctacacattgttgggcc 109
           |||||||||||||||||||||||||||||||||| ||| ||||| ||||
Sbjct: 62  aagcaatcagcaagtatactgccctagaagtgctgcacgttgttaggcc 110




>27496_age-mir-34a:mirbase
          Length = 111

 Score =  176 bits (89), Expect = 2e-45
 Identities = 104/109 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatagttaagg 60
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 2   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgtgcaatagtgaagg 61

                                                            
Query: 61  aagcaatcagcaagtatactgccctagaagtgctacacattgttgggcc 109
           |||||||||||||||||||||||||||||||||| ||| |||| |||||
Sbjct: 62  aagcaatcagcaagtatactgccctagaagtgctgcacgttgtggggcc 110




>27604_sla-mir-34a:mirbase
          Length = 111

 Score =  176 bits (89), Expect = 2e-45
 Identities = 101/105 (96%)
 Strand = Plus / Plus

                                                                       
Query: 5   gctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatagttaaggaagc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 6   gctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatagtgaaggaagc 65

                                                        
Query: 65  aatcagcaagtatactgccctagaagtgctacacattgttgggcc 109
           |||||||||||||||||||||||||||||| ||| |||| |||||
Sbjct: 66  aatcagcaagtatactgccctagaagtgctgcacgttgtggggcc 110




>28285_ggo-mir-34a:mirbase
          Length = 110

 Score =  176 bits (89), Expect = 2e-45
 Identities = 105/109 (96%), Gaps = 1/109 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatagttaagg 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatag-taagg 60

                                                            
Query: 61  aagcaatcagcaagtatactgccctagaagtgctacacattgttgggcc 109
           |||||||||||||||||||||||||||||||||| ||| |||| |||||
Sbjct: 61  aagcaatcagcaagtatactgccctagaagtgctgcacgttgtggggcc 109




>28401_hsa-mir-34a:mirbase
          Length = 110

 Score =  176 bits (89), Expect = 2e-45
 Identities = 105/109 (96%), Gaps = 1/109 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatagttaagg 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatag-taagg 60

                                                            
Query: 61  aagcaatcagcaagtatactgccctagaagtgctacacattgttgggcc 109
           |||||||||||||||||||||||||||||||||| ||| |||| |||||
Sbjct: 61  aagcaatcagcaagtatactgccctagaagtgctgcacgttgtggggcc 109




>30187_ptr-mir-34a:mirbase
          Length = 110

 Score =  176 bits (89), Expect = 2e-45
 Identities = 105/109 (96%), Gaps = 1/109 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatagttaagg 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatag-taagg 60

                                                            
Query: 61  aagcaatcagcaagtatactgccctagaagtgctacacattgttgggcc 109
           |||||||||||||||||||||||||||||||||| ||| |||| |||||
Sbjct: 61  aagcaatcagcaagtatactgccctagaagtgctgcacgttgtggggcc 109




>30791_ppy-mir-34a:mirbase
          Length = 110

 Score =  176 bits (89), Expect = 2e-45
 Identities = 105/109 (96%), Gaps = 1/109 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatagttaagg 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatag-taagg 60

                                                            
Query: 61  aagcaatcagcaagtatactgccctagaagtgctacacattgttgggcc 109
           |||||||||||||||||||||||||||||||||| ||| |||| |||||
Sbjct: 61  aagcaatcagcaagtatactgccctagaagtgctgcacgttgtggggcc 109




>30072_ppa-mir-34a:mirbase
          Length = 110

 Score =  172 bits (87), Expect = 3e-44
 Identities = 100/103 (97%), Gaps = 1/103 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatagttaagg 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatag-taagg 60

                                                      
Query: 61  aagcaatcagcaagtatactgccctagaagtgctacacattgt 103
           |||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 61  aagcaatcagcaagtatactgccctagaagtgctgcacgttgt 103




>33175_bta-mir-34a:mirbase
          Length = 107

 Score =  157 bits (79), Expect = 2e-39
 Identities = 97/103 (94%)
 Strand = Plus / Plus

                                                                       
Query: 1   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatagttaagg 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||| |  |||
Sbjct: 2   gccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagtaataatgcagg 61

                                                      
Query: 61  aagcaatcagcaagtatactgccctagaagtgctacacattgt 103
           |||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 62  aagcaatcagcaagtatactgccctagaagtgctgcacgttgt 104




>31815_mmu-mir-34a:mirbase
          Length = 102

 Score =  155 bits (78), Expect = 8e-39
 Identities = 96/102 (94%)
 Strand = Plus / Plus

                                                                       
Query: 2   ccagctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatagttaagga 61
           ||||||||||||  ||||||||||||||||||||||||||||||||| | ||| ||||||
Sbjct: 1   ccagctgtgagtaattctttggcagtgtcttagctggttgttgtgagtattagctaagga 60

                                                     
Query: 62  agcaatcagcaagtatactgccctagaagtgctacacattgt 103
           ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 61  agcaatcagcaagtatactgccctagaagtgctgcacattgt 102




>32697_rno-mir-34a:mirbase
          Length = 102

 Score =  141 bits (71), Expect = 1e-34
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                       
Query: 5   gctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatagttaaggaagc 64
           |||||||||  ||||||||||||||||||||||||||||||||| | ||| |||||||||
Sbjct: 4   gctgtgagtaattctttggcagtgtcttagctggttgttgtgagtattagctaaggaagc 63

                                                  
Query: 65  aatcagcaagtatactgccctagaagtgctacacattgt 103
           |||||||||||||||||||||||||||||| ||| ||||
Sbjct: 64  aatcagcaagtatactgccctagaagtgctgcacgttgt 102




>26432_tgu-mir-34a:mirbase
          Length = 72

 Score =  135 bits (68), Expect = 7e-33
 Identities = 71/72 (98%)
 Strand = Plus / Plus

                                                                      
Query: 11 agtgtttctttggcagtgtcttagctggttgttgtgagcaatagttaaggaagcaatcag 70
          ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1  agtgtttctttggcagtgtcttagctggttgttgtgagcaatagtcaaggaagcaatcag 60

                      
Query: 71 caagtatactgc 82
          ||||||||||||
Sbjct: 61 caagtatactgc 72




>26663_cfa-mir-34a:mirbase
          Length = 66

 Score =  115 bits (58), Expect = 7e-27
 Identities = 64/66 (96%)
 Strand = Plus / Plus

                                                                      
Query: 21 tggcagtgtcttagctggttgttgtgagcaatagttaaggaagcaatcagcaagtatact 80
          |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 1  tggcagtgtcttagctggttgttgtgagtaatagtgaaggaagcaatcagcaagtatact 60

                
Query: 81 gcccta 86
          ||||||
Sbjct: 61 gcccta 66




>26984_eca-mir-34:mirbase
          Length = 63

 Score = 93.7 bits (47), Expect = 3e-20
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                      
Query: 21 tggcagtgtcttagctggttgttgtgagcaatagttaaggaagcaatcagcaagtatact 80
          |||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||
Sbjct: 1  tggcagtgtcttagctggttgttgtgagtaatagtgcgggaagcaatcagcaagtatact 60

             
Query: 81 gcc 83
          |||
Sbjct: 61 gcc 63




>33948_ssc-mir-34a:mirbase
          Length = 76

 Score = 93.7 bits (47), Expect = 3e-20
 Identities = 69/75 (92%), Gaps = 1/75 (1%)
 Strand = Plus / Plus

                                                                      
Query: 15 tttctttggcagtgtcttagctggttgttgtgagcaatagttaaggaagcaatcagcaag 74
          |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||| ||
Sbjct: 1  tttctttggcagtgtcttagctggttgttgtgagtaatagcaaaggaagcaatcagc-ag 59

                         
Query: 75 tatactgccctagaa 89
           || |||||||||||
Sbjct: 60 catcctgccctagaa 74




>25742_xtr-mir-34a:mirbase
          Length = 96

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 87/99 (87%), Gaps = 6/99 (6%)
 Strand = Plus / Plus

                                                                       
Query: 6   ctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatagtta---aggaa 62
           ||||||||||||||||||||||||||||||||||||||||| |||   ||||   | | |
Sbjct: 1   ctgtgagtgtttctttggcagtgtcttagctggttgttgtg-gca--cgttatagaagta 57

                                                  
Query: 63  gcaatcagcaagtatactgccctagaagtgctacacatt 101
           ||||||||||| ||||||||||||||||| || ||||||
Sbjct: 58  gcaatcagcaaatatactgccctagaagttctgcacatt 96




>34253_dre-mir-34:mirbase
          Length = 98

 Score = 77.8 bits (39), Expect = 1e-15
 Identities = 70/79 (88%), Gaps = 1/79 (1%)
 Strand = Plus / Plus

                                                                      
Query: 5  gctgtgagtgtttctttggcagtgtcttagctggttgttgtgagcaatagttaaggaagc 64
          |||||||||| |||| |||||||||||||||||||||||||| | | | |  || |||||
Sbjct: 3  gctgtgagtggttctctggcagtgtcttagctggttgttgtgtggagt-gagaacgaagc 61

                             
Query: 65 aatcagcaagtatactgcc 83
          |||||||||||||||||||
Sbjct: 62 aatcagcaagtatactgcc 80