miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26442_tgu-mir-101-1:mirbase
Length = 72
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 8 tttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataactg 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataactg 60
Query: 68 aagaatggtggt 79
||||||||||||
Sbjct: 61 aagaatggtggt 72
>27366_mdo-mir-101-2:mirbase
Length = 79
Score = 133 bits (67), Expect = 2e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 5 tcctttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataa 64
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 5 tcctttttcggttatcatggtaccgatgctgtatatgtgaaaggtacagtactgtgataa 64
Query: 65 ctgaagaatggtggt 79
|||||||||||||||
Sbjct: 65 ctgaagaatggtggt 79
>25756_xtr-mir-101a-1:mirbase
Length = 91
Score = 125 bits (63), Expect = 5e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 5 tcctttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataa 64
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 11 tcctttttcggttatcatggtaccggtgctgtgtatatgaaaggtacagtactgtgataa 70
Query: 65 ctgaagaatggtggt 79
|||||||||||||||
Sbjct: 71 ctgaagaatggtggt 85
>27706_mml-mir-101-2:mirbase
Length = 79
Score = 125 bits (63), Expect = 5e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 5 tcctttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataa 64
||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 5 tcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgataa 64
Query: 65 ctgaagaatggtggt 79
|||||||||||||||
Sbjct: 65 ctgaagaatggtggt 79
>28416_hsa-mir-101-2:mirbase
Length = 79
Score = 125 bits (63), Expect = 5e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 5 tcctttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataa 64
||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 5 tcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgataa 64
Query: 65 ctgaagaatggtggt 79
|||||||||||||||
Sbjct: 65 ctgaagaatggtggt 79
>30200_ptr-mir-101-2:mirbase
Length = 78
Score = 125 bits (63), Expect = 5e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 5 tcctttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataa 64
||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 4 tcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgataa 63
Query: 65 ctgaagaatggtggt 79
|||||||||||||||
Sbjct: 64 ctgaagaatggtggt 78
>30806_ppy-mir-101-2:mirbase
Length = 79
Score = 125 bits (63), Expect = 5e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 5 tcctttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataa 64
||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 5 tcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgataa 64
Query: 65 ctgaagaatggtggt 79
|||||||||||||||
Sbjct: 65 ctgaagaatggtggt 79
>31473_oan-mir-101-2:mirbase
Length = 79
Score = 125 bits (63), Expect = 5e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 5 tcctttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataa 64
||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 5 tcctttttcggttatcacggtaccgatgctgtatatgtgaaaggtacagtactgtgataa 64
Query: 65 ctgaagaatggtggt 79
|||||||||||||||
Sbjct: 65 ctgaagaatggtggt 79
>33188_bta-mir-101:mirbase
Length = 79
Score = 125 bits (63), Expect = 5e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 5 tcctttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataa 64
||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 5 tcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgataa 64
Query: 65 ctgaagaatggtggt 79
|||||||||||||||
Sbjct: 65 ctgaagaatggtggt 79
>33959_ssc-mir-101-1:mirbase
Length = 91
Score = 125 bits (63), Expect = 5e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 5 tcctttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataa 64
||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 11 tcctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgataa 70
Query: 65 ctgaagaatggtggt 79
|||||||||||||||
Sbjct: 71 ctgaagaatggtggt 85
>26999_eca-mir-101-2:mirbase
Length = 72
Score = 119 bits (60), Expect = 3e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 6 cctttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataac 65
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 1 cctttttcggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgataac 60
Query: 66 tgaagaatggtg 77
||||||||||||
Sbjct: 61 tgaagaatggtg 72
>32710_rno-mir-101b:mirbase
Length = 97
Score = 109 bits (55), Expect = 3e-25
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 5 tcctttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataa 64
||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||
Sbjct: 17 tcctttttcggttatcatggtaccgatgctgtagatctgaaaggtacagtactgtgatag 76
Query: 65 ctgaagaatggtggt 79
|||||||||||||||
Sbjct: 77 ctgaagaatggtggt 91
>31829_mmu-mir-101b:mirbase
Length = 97
Score = 91.7 bits (46), Expect = 7e-20
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 6 cctttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataac 65
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |
Sbjct: 18 cctttttcggttatcatggtaccgatgctgtagctctgaaaggtacagtactgtgatagc 77
Query: 66 tgaagaatgg 75
||||||||||
Sbjct: 78 tgaagaatgg 87
>26677_cfa-mir-101-2:mirbase
Length = 55
Score = 85.7 bits (43), Expect = 4e-18
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 14 ggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataactga 68
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 1 ggttatcatggtaccgatgctgtatatctgaaaggtacagtactgtgataactga 55
>34266_dre-mir-101b:mirbase
Length = 112
Score = 61.9 bits (31), Expect = 6e-11
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 9 ttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataactga 68
||||| |||||||||||||||||||||| | | || | |||||||||| ||||||||||
Sbjct: 24 ttttcagttatcatggtaccggtgctgtgtgcctgtcaagtacagtactatgataactga 83
Query: 69 aga 71
|||
Sbjct: 84 aga 86
>25757_xtr-mir-101a-2:mirbase
Length = 83
Score = 58.0 bits (29), Expect = 9e-10
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaagaatggt 76
||||||||||||||||||||||||||| |||||
Sbjct: 46 aaaggtacagtactgtgataactgaaggatggt 78
>25932_gga-mir-101-2:mirbase
Length = 76
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaagaatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 44 aaaggtacagtactgtgataactgaaggatgg 75
>26443_tgu-mir-101-2:mirbase
Length = 72
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaagaatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 37 aaaggtacagtactgtgataactgaaggatgg 68
>27502_age-mir-101:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaagaatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>27564_lla-mir-101:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaagaatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>27611_sla-mir-101:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaagaatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>27705_mml-mir-101-1:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaagaatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>28202_mne-mir-101:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaagaatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>28294_ggo-mir-101:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaagaatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>28415_hsa-mir-101-1:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaagaatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>30081_ppa-mir-101:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaagaatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>30199_ptr-mir-101-1:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaagaatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>30804_ppy-mir-101:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaagaatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>30805_ppy-mir-101-1:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaagaatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>31472_oan-mir-101-1:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaagaatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 45 aaaggtacagtactgtgataactgaaggatgg 76
>31828_mmu-mir-101a:mirbase
Length = 83
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaagaatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 46 aaaggtacagtactgtgataactgaaggatgg 77
>32709_rno-mir-101a:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaagaatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 42 aaaggtacagtactgtgataactgaaggatgg 73
>33189_bta-mir-101-1:mirbase
Length = 83
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaagaatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 46 aaaggtacagtactgtgataactgaaggatgg 77
>33960_ssc-mir-101-2:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaagaatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 45 aaaggtacagtactgtgataactgaaggatgg 76
>34265_dre-mir-101a:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaagaatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 45 aaaggtacagtactgtgataactgaaggatgg 76
>27365_mdo-mir-101-1:mirbase
Length = 83
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 45 aaggtacagtactgtgataactgaagaatgg 75
|||||||||||||||||||||||||| ||||
Sbjct: 47 aaggtacagtactgtgataactgaaggatgg 77
>34580_fru-mir-101a:mirbase
Length = 74
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 45 aaggtacagtactgtgataactgaagaatgg 75
|||||||||||||||||||||||||| ||||
Sbjct: 43 aaggtacagtactgtgataactgaaggatgg 73
>34727_tni-mir-101a:mirbase
Length = 74
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 45 aaggtacagtactgtgataactgaagaatgg 75
|||||||||||||||||||||||||| ||||
Sbjct: 43 aaggtacagtactgtgataactgaaggatgg 73
>34728_tni-mir-101b:mirbase
Length = 88
Score = 54.0 bits (27), Expect = 1e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 9 ttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataactga 68
||||||||||||||||||||| |||||| | | | | |||||||||| ||||||||||
Sbjct: 12 ttttcggttatcatggtaccgctgctgtgtccctctcaagtacagtactatgataactga 71
Query: 69 aga 71
|||
Sbjct: 72 aga 74
>26998_eca-mir-101:mirbase
Length = 59
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaa 69
||||||||||||||||||||||||||
Sbjct: 34 aaaggtacagtactgtgataactgaa 59
>26676_cfa-mir-101-1:mirbase
Length = 55
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactga 68
|||||||||||||||||||||||||
Sbjct: 31 aaaggtacagtactgtgataactga 55
>34581_fru-mir-101b:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 4e-06
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 9 ttttcggttatcatggtaccggtgctgtatacgtgaaaggtacagtactgtgataactga 68
||||| ||||||||||||||| |||||| | | | | |||||||||| ||||||||||
Sbjct: 12 ttttcagttatcatggtaccgctgctgtgtccctctcaagtacagtactatgataactga 71
Query: 69 aga 71
|||
Sbjct: 72 aga 74
>31830_mmu-mir-101c:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 50 acagtactgtgataactga 68
|||||||||||||||||||
Sbjct: 46 acagtactgtgataactga 64
