miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26443_tgu-mir-101-2:mirbase
Length = 72
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 8 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 60
Query: 68 aaggatggc 76
|||||||||
Sbjct: 61 aaggatggc 69
>27502_age-mir-101:mirbase
Length = 75
Score = 131 bits (66), Expect = 8e-32
Identities = 72/74 (97%)
Strand = Plus / Plus
Query: 3 tgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgat 62
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtctattctaaaggtacagtactgtgat 60
Query: 63 aactgaaggatggc 76
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>28415_hsa-mir-101-1:mirbase
Length = 75
Score = 131 bits (66), Expect = 8e-32
Identities = 72/74 (97%)
Strand = Plus / Plus
Query: 3 tgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgat 62
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtctattctaaaggtacagtactgtgat 60
Query: 63 aactgaaggatggc 76
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>30804_ppy-mir-101:mirbase
Length = 75
Score = 131 bits (66), Expect = 8e-32
Identities = 72/74 (97%)
Strand = Plus / Plus
Query: 3 tgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgat 62
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtctattctaaaggtacagtactgtgat 60
Query: 63 aactgaaggatggc 76
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>31472_oan-mir-101-1:mirbase
Length = 81
Score = 127 bits (64), Expect = 1e-30
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 1 gctgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtg 60
||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 2 gctgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtg 61
Query: 61 ataactgaaggatggc 76
||||||||||||||||
Sbjct: 62 ataactgaaggatggc 77
>31828_mmu-mir-101a:mirbase
Length = 83
Score = 127 bits (64), Expect = 1e-30
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 1 gctgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtg 60
||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 3 gctgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtg 62
Query: 61 ataactgaaggatggc 76
||||||||||||||||
Sbjct: 63 ataactgaaggatggc 78
>33189_bta-mir-101-1:mirbase
Length = 83
Score = 127 bits (64), Expect = 1e-30
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 1 gctgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtg 60
||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 3 gctgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtg 62
Query: 61 ataactgaaggatggc 76
||||||||||||||||
Sbjct: 63 ataactgaaggatggc 78
>33960_ssc-mir-101-2:mirbase
Length = 81
Score = 127 bits (64), Expect = 1e-30
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 1 gctgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtg 60
||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 2 gctgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtg 61
Query: 61 ataactgaaggatggc 76
||||||||||||||||
Sbjct: 62 ataactgaaggatggc 77
>25757_xtr-mir-101a-2:mirbase
Length = 83
Score = 125 bits (63), Expect = 5e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 1 gctgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtg 60
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 3 gctgccctggctcagttatcacagtgctgatgctgtctactctaaaggtacagtactgtg 62
Query: 61 ataactgaaggatgg 75
|||||||||||||||
Sbjct: 63 ataactgaaggatgg 77
>27564_lla-mir-101:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 3 tgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgat 62
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgat 60
Query: 63 aactgaaggatggc 76
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>27611_sla-mir-101:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 3 tgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgat 62
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgat 60
Query: 63 aactgaaggatggc 76
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>27705_mml-mir-101-1:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 3 tgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgat 62
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgat 60
Query: 63 aactgaaggatggc 76
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>28202_mne-mir-101:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 3 tgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgat 62
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgat 60
Query: 63 aactgaaggatggc 76
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>28294_ggo-mir-101:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 3 tgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgat 62
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgat 60
Query: 63 aactgaaggatggc 76
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>30081_ppa-mir-101:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 3 tgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgat 62
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgat 60
Query: 63 aactgaaggatggc 76
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>30199_ptr-mir-101-1:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 3 tgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgat 62
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgat 60
Query: 63 aactgaaggatggc 76
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>30805_ppy-mir-101-1:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 3 tgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgat 62
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgat 60
Query: 63 aactgaaggatggc 76
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>32709_rno-mir-101a:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 3 tgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgat 62
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgat 60
Query: 63 aactgaaggatggc 76
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>27365_mdo-mir-101-1:mirbase
Length = 83
Score = 119 bits (60), Expect = 3e-28
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 1 gctgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtg 60
||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||
Sbjct: 3 gctgccctggctcagttatcacagtgctgatgctgtccgttctcaaggtacagtactgtg 62
Query: 61 ataactgaaggatggc 76
||||||||||||||||
Sbjct: 63 ataactgaaggatggc 78
>34265_dre-mir-101a:mirbase
Length = 81
Score = 111 bits (56), Expect = 7e-26
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 1 gctgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtg 60
|||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 2 gctgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgtg 61
Query: 61 ataactgaaggatggc 76
||||||||||||||||
Sbjct: 62 ataactgaaggatggc 77
>26998_eca-mir-101:mirbase
Length = 59
Score = 93.7 bits (47), Expect = 2e-20
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 11 ctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactgaa 69
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
>34580_fru-mir-101a:mirbase
Length = 74
Score = 91.7 bits (46), Expect = 6e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 3 tgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgat 62
|||||||| |||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 1 tgccctggttcagttatcacagtgctgatgctgtccccatcgaaggtacagtactgtgat 60
Query: 63 aactgaaggatggc 76
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>34727_tni-mir-101a:mirbase
Length = 74
Score = 91.7 bits (46), Expect = 6e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 3 tgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgat 62
|||||||| |||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 1 tgccctggttcagttatcacagtgctgatgctgtccccatcgaaggtacagtactgtgat 60
Query: 63 aactgaaggatggc 76
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>26676_cfa-mir-101-1:mirbase
Length = 55
Score = 85.7 bits (43), Expect = 4e-18
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 14 agttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactga 68
|||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 1 agttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactga 55
>25756_xtr-mir-101a-1:mirbase
Length = 91
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaaggatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 50 aaaggtacagtactgtgataactgaagaatgg 81
>25931_gga-mir-101:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaaggatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 44 aaaggtacagtactgtgataactgaagaatgg 75
>26442_tgu-mir-101-1:mirbase
Length = 72
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaaggatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 37 aaaggtacagtactgtgataactgaagaatgg 68
>26999_eca-mir-101-2:mirbase
Length = 72
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaaggatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 39 aaaggtacagtactgtgataactgaagaatgg 70
>27366_mdo-mir-101-2:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaaggatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 44 aaaggtacagtactgtgataactgaagaatgg 75
>27706_mml-mir-101-2:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaaggatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 44 aaaggtacagtactgtgataactgaagaatgg 75
>28416_hsa-mir-101-2:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaaggatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 44 aaaggtacagtactgtgataactgaagaatgg 75
>30200_ptr-mir-101-2:mirbase
Length = 78
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaaggatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 43 aaaggtacagtactgtgataactgaagaatgg 74
>30806_ppy-mir-101-2:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaaggatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 44 aaaggtacagtactgtgataactgaagaatgg 75
>31473_oan-mir-101-2:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaaggatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 44 aaaggtacagtactgtgataactgaagaatgg 75
>33188_bta-mir-101:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaaggatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 44 aaaggtacagtactgtgataactgaagaatgg 75
>33959_ssc-mir-101-1:mirbase
Length = 91
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaaggatgg 75
||||||||||||||||||||||||||| ||||
Sbjct: 50 aaaggtacagtactgtgataactgaagaatgg 81
>26677_cfa-mir-101-2:mirbase
Length = 55
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactga 68
|||||||||||||||||||||||||
Sbjct: 31 aaaggtacagtactgtgataactga 55
>31829_mmu-mir-101b:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaaggatggc 76
|||||||||||||||||||| |||||| |||||
Sbjct: 56 aaaggtacagtactgtgatagctgaagaatggc 88
>32710_rno-mir-101b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 9e-07
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 44 aaaggtacagtactgtgataactgaaggatgg 75
|||||||||||||||||||| |||||| ||||
Sbjct: 56 aaaggtacagtactgtgatagctgaagaatgg 87
>31830_mmu-mir-101c:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 50 acagtactgtgataactga 68
|||||||||||||||||||
Sbjct: 46 acagtactgtgataactga 64
>34266_dre-mir-101b:mirbase
Length = 112
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 48 gtacagtactgtgataactgaag 70
|||||||||| ||||||||||||
Sbjct: 63 gtacagtactatgataactgaag 85
>34581_fru-mir-101b:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 48 gtacagtactgtgataactgaag 70
|||||||||| ||||||||||||
Sbjct: 51 gtacagtactatgataactgaag 73
>34728_tni-mir-101b:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 48 gtacagtactgtgataactgaag 70
|||||||||| ||||||||||||
Sbjct: 51 gtacagtactatgataactgaag 73
