miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26457_tgu-mir-128-2:mirbase
Length = 110
Score = 155 bits (78), Expect = 6e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 7 gctggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggt 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 gctggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggt 81
Query: 67 ctcttttcctgctgtgtc 84
||||||||||||||||||
Sbjct: 82 ctcttttcctgctgtgtc 99
>27378_mdo-mir-128:mirbase
Length = 84
Score = 131 bits (66), Expect = 9e-32
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 5 cagctggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccg 64
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5 cagcaggaaggggggccgttacactgtcagagagtgagtagcaggtctcacagtgaaccg 64
Query: 65 gtctcttttcctgctgtg 82
|||||||| |||||||||
Sbjct: 65 gtctctttccctgctgtg 82
>25769_xtr-mir-128-2:mirbase
Length = 80
Score = 123 bits (62), Expect = 2e-29
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 5 cagctggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccg 64
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4 cagctggaacgggggccgttacactgtaagagagtgagtagtaggtctcacagtgaaccg 63
Query: 65 gtctcttttc 74
||||||||||
Sbjct: 64 gtctcttttc 73
>31483_oan-mir-128-2:mirbase
Length = 111
Score = 119 bits (60), Expect = 3e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 5 cagctggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccg 64
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 18 cagccggaaggggggccgttacactgtaagagagtgagtaccaggtctcacagtgaaccg 77
Query: 65 gtctcttt 72
||||||||
Sbjct: 78 gtctcttt 85
>27724_mml-mir-128b:mirbase
Length = 84
Score = 117 bits (59), Expect = 1e-27
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 10 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 69
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggaaggggggccgatacactgtacgagagtgagtagcaggtctcacagtgaaccggtctc 69
Query: 70 ttttcctgctgtgtc 84
||| ||| |||||||
Sbjct: 70 tttccctactgtgtc 84
>28438_hsa-mir-128-2:mirbase
Length = 84
Score = 117 bits (59), Expect = 1e-27
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 10 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 69
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggaaggggggccgatacactgtacgagagtgagtagcaggtctcacagtgaaccggtctc 69
Query: 70 ttttcctgctgtgtc 84
||| ||| |||||||
Sbjct: 70 tttccctactgtgtc 84
>30215_ptr-mir-128-2:mirbase
Length = 83
Score = 117 bits (59), Expect = 1e-27
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 10 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 69
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 9 ggaaggggggccgatacactgtacgagagtgagtagcaggtctcacagtgaaccggtctc 68
Query: 70 ttttcctgctgtgtc 84
||| ||| |||||||
Sbjct: 69 tttccctactgtgtc 83
>30824_ppy-mir-128-2:mirbase
Length = 84
Score = 117 bits (59), Expect = 1e-27
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 10 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 69
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggaaggggggccgatacactgtacgagagtgagtagcaggtctcacagtgaaccggtctc 69
Query: 70 ttttcctgctgtgtc 84
||| ||| |||||||
Sbjct: 70 tttccctactgtgtc 84
>32728_rno-mir-128-2:mirbase
Length = 84
Score = 117 bits (59), Expect = 1e-27
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 10 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 69
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 69
Query: 70 ttttcctgctgtgtc 84
||| ||| |||||||
Sbjct: 70 tttccctactgtgtc 84
>27016_eca-mir-128:mirbase
Length = 84
Score = 109 bits (55), Expect = 3e-25
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 10 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 69
||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggaaggggggccgatgcactgtacgagagtgagtagcaggtctcacagtgaaccggtctc 69
Query: 70 ttttcctgctgtgtc 84
||| ||| |||||||
Sbjct: 70 tttccctactgtgtc 84
>31851_mmu-mir-128-2:mirbase
Length = 76
Score = 109 bits (55), Expect = 3e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 10 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 69
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 ggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 65
Query: 70 ttt 72
|||
Sbjct: 66 ttt 68
>26695_cfa-mir-128-2:mirbase
Length = 58
Score = 99.6 bits (50), Expect = 3e-22
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 15 gggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctcttt 72
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggggccgatacactgtacgagagtgagtagcaggtctcacagtgaaccggtctcttt 58
>33207_bta-mir-128-2:mirbase
Length = 84
Score = 93.7 bits (47), Expect = 2e-20
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 10 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 69
||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggaaggggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaaccggtctc 69
Query: 70 ttttcctgctgtgtc 84
||| ||| |||||||
Sbjct: 70 tttccctactgtgtc 84
>33976_ssc-mir-128-2:mirbase
Length = 80
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 10 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 69
||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 7 ggaaggggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaaccggtctc 66
Query: 70 ttttcctgctgtgt 83
||| ||| ||||||
Sbjct: 67 tttccctactgtgt 80
>34592_fru-mir-128-2:mirbase
Length = 72
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 48 ggtctcacagtgaaccggtctcttttcctgctg 80
|||||||||||||||||||||||||||||||||
Sbjct: 40 ggtctcacagtgaaccggtctcttttcctgctg 72
>34739_tni-mir-128-2:mirbase
Length = 72
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 48 ggtctcacagtgaaccggtctcttttcctgctg 80
|||||||||||||||||||||||||||||||||
Sbjct: 40 ggtctcacagtgaaccggtctcttttcctgctg 72
>34286_dre-mir-128-2:mirbase
Length = 123
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 49 gtctcacagtgaaccggtctcttttcctgct 79
|||||||||||||||||||||||||||||||
Sbjct: 66 gtctcacagtgaaccggtctcttttcctgct 96
>34591_fru-mir-128-1:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 50 tctcacagtgaaccggtctcttttcc 75
||||||||||||||||||||||||||
Sbjct: 49 tctcacagtgaaccggtctcttttcc 74
>25476_pma-mir-128-1:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 49 gtctcacagtgaaccggtctcttttcctg 77
|||||||||||||||||||||||| ||||
Sbjct: 53 gtctcacagtgaaccggtctctttccctg 81
>31482_oan-mir-128-1:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 49 gtctcacagtgaaccggtctctttt 73
|||||||||||||||||||||||||
Sbjct: 41 gtctcacagtgaaccggtctctttt 65
>25477_pma-mir-128-2:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 50 tctcacagtgaaccggtctcttttcctg 77
||||||||||||||||||||||| ||||
Sbjct: 54 tctcacagtgaaccggtctctttccctg 81
>25768_xtr-mir-128-1:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tctcacagtgaaccggtctctttt 73
||||||||||||||||||||||||
Sbjct: 49 tctcacagtgaaccggtctctttt 72
>25945_gga-mir-128-1:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tctcacagtgaaccggtctctttt 73
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>26456_tgu-mir-128-1:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tctcacagtgaaccggtctctttt 73
||||||||||||||||||||||||
Sbjct: 39 tctcacagtgaaccggtctctttt 62
>27017_eca-mir-128-2:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tctcacagtgaaccggtctctttt 73
||||||||||||||||||||||||
Sbjct: 42 tctcacagtgaaccggtctctttt 65
>27510_age-mir-128:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tctcacagtgaaccggtctctttt 73
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>27617_sla-mir-128:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tctcacagtgaaccggtctctttt 73
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>27723_mml-mir-128a:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tctcacagtgaaccggtctctttt 73
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>28437_hsa-mir-128-1:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tctcacagtgaaccggtctctttt 73
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>30089_ppa-mir-128:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tctcacagtgaaccggtctctttt 73
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>30214_ptr-mir-128-1:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tctcacagtgaaccggtctctttt 73
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>30823_ppy-mir-128:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tctcacagtgaaccggtctctttt 73
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>31850_mmu-mir-128-1:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tctcacagtgaaccggtctctttt 73
||||||||||||||||||||||||
Sbjct: 42 tctcacagtgaaccggtctctttt 65
>32727_rno-mir-128-1:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tctcacagtgaaccggtctctttt 73
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>33206_bta-mir-128-1:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tctcacagtgaaccggtctctttt 73
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>33975_ssc-mir-128-1:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tctcacagtgaaccggtctctttt 73
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>34285_dre-mir-128-1:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tctcacagtgaaccggtctctttt 73
||||||||||||||||||||||||
Sbjct: 58 tctcacagtgaaccggtctctttt 81
>34738_tni-mir-128-1:mirbase
Length = 72
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tctcacagtgaaccggtctctttt 73
||||||||||||||||||||||||
Sbjct: 44 tctcacagtgaaccggtctctttt 67
>26694_cfa-mir-128-1:mirbase
Length = 56
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tctcacagtgaaccggtctcttt 72
|||||||||||||||||||||||
Sbjct: 34 tctcacagtgaaccggtctcttt 56