miRNEST 2.0, an integrative microRNA resource :: BLAST
>40706_mtr-MIR393:mirbase
Length = 135
Score = 67.9 bits (34), Expect = 5e-12
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 340 ggatcaatgcgatccctttggatgcctccttaagttgc 377
|||||||||||||||||||||||||||||| |||||||
Sbjct: 42 ggatcaatgcgatccctttggatgcctcctcaagttgc 5
>41642_vvi-MIR393b:mirbase
Length = 83
Score = 60.0 bits (30), Expect = 1e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 340 ggatcaatgcgatccctttggatgcctcct 369
||||||||||||||||||||||||||||||
Sbjct: 32 ggatcaatgcgatccctttggatgcctcct 3
Score = 58.0 bits (29), Expect = 5e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 10 aaaggaggagtccaaagggatagcatgatccaa 42
||||||||| |||||||||||||||||||||||
Sbjct: 81 aaaggaggaatccaaagggatagcatgatccaa 49
>41418_ptc-MIR393b:mirbase
Length = 84
Score = 60.0 bits (30), Expect = 1e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 340 ggatcaatgcgatccctttggatgcctcct 369
||||||||||||||||||||||||||||||
Sbjct: 32 ggatcaatgcgatccctttggatgcctcct 3
Score = 54.0 bits (27), Expect = 8e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 12 aggaggagtccaaagggatagcatgatccaa 42
||||||| |||||||||||||||||||||||
Sbjct: 84 aggaggaatccaaagggatagcatgatccaa 54
>41417_ptc-MIR393a:mirbase
Length = 85
Score = 60.0 bits (30), Expect = 1e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 340 ggatcaatgcgatccctttggatgcctcct 369
||||||||||||||||||||||||||||||
Sbjct: 32 ggatcaatgcgatccctttggatgcctcct 3
Score = 54.0 bits (27), Expect = 8e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 12 aggaggagtccaaagggatagcatgatccaa 42
||||||| |||||||||||||||||||||||
Sbjct: 85 aggaggaatccaaagggatagcatgatccaa 55
>41132_tcc-MIR393a:mirbase
Length = 118
Score = 60.0 bits (30), Expect = 1e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 340 ggatcaatgcgatccctttggatgcctcct 369
||||||||||||||||||||||||||||||
Sbjct: 42 ggatcaatgcgatccctttggatgcctcct 13
Score = 58.0 bits (29), Expect = 5e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 10 aaaggaggagtccaaagggatagcatgatccaa 42
||||||||| |||||||||||||||||||||||
Sbjct: 108 aaaggaggaatccaaagggatagcatgatccaa 76
>40470_gma-MIR393:mirbase
Length = 120
Score = 60.0 bits (30), Expect = 1e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 340 ggatcaatgcgatccctttggatgcctcct 369
||||||||||||||||||||||||||||||
Sbjct: 32 ggatcaatgcgatccctttggatgcctcct 3
Score = 46.1 bits (23), Expect = 2e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 10 aaaggaggagtccaaagggatagcatgatcc 40
||||||| | |||||||||||||||||||||
Sbjct: 120 aaaggagaaatccaaagggatagcatgatcc 90
>40707_mtr-MIR393b:mirbase
Length = 119
Score = 54.0 bits (27), Expect = 8e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 340 ggatcaatgcgatccctttggatgcct 366
|||||||||||||||||||||||||||
Sbjct: 27 ggatcaatgcgatccctttggatgcct 1
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 20 tccaaagggatagcatgatcc 40
|||||||||||||||||||||
Sbjct: 114 tccaaagggatagcatgatcc 94
>42566_sbi-MIR393:mirbase
Length = 139
Score = 52.0 bits (26), Expect = 3e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 340 ggatcaatgcgatccctttggatgcctcct 369
||||||||||||||||||||||||| ||||
Sbjct: 41 ggatcaatgcgatccctttggatgcttcct 12
>41997_osa-MIR393:mirbase
Length = 115
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 340 ggatcaatgcgatccctttggatgc 364
|||||||||||||||||||||||||
Sbjct: 32 ggatcaatgcgatccctttggatgc 8
>41774_bdi-MIR393a:mirbase
Length = 159
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 340 ggatcaatgcgatccctttggatgc 364
|||||||||||||||||||||||||
Sbjct: 57 ggatcaatgcgatccctttggatgc 33
>39866_aly-MIR393b:mirbase
Length = 169
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 340 ggatcaatgcgatccctttggatgc 364
|||||||||||||||||||||||||
Sbjct: 39 ggatcaatgcgatccctttggatgc 15
>42787_zma-MIR393b:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 339 tggatcaatgcgatccctttgga 361
|||||||||||||||||||||||
Sbjct: 24 tggatcaatgcgatccctttgga 2
>41238_csi-MIR393:mirbase
Length = 145
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 340 ggatcaatgcgatccctttggat 362
|||||||||||||||||||||||
Sbjct: 42 ggatcaatgcgatccctttggat 20
>40076_ath-MIR393b:mirbase
Length = 160
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 340 ggatcaatgcgatccctttggat 362
|||||||||||||||||||||||
Sbjct: 32 ggatcaatgcgatccctttggat 10
>40075_ath-MIR393a:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 340 ggatcaatgcgatccctttggat 362
|||||||||||||||||||||||
Sbjct: 32 ggatcaatgcgatccctttggat 10
>39865_aly-MIR393a:mirbase
Length = 147
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 340 ggatcaatgcgatccctttggat 362
|||||||||||||||||||||||
Sbjct: 39 ggatcaatgcgatccctttggat 17
>41641_vvi-MIR393a:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 8e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 340 ggatcaatgcgatccctttgga 361
||||||||||||||||||||||
Sbjct: 32 ggatcaatgcgatccctttgga 11
>40295_bna-MIR393:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 8e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 340 ggatcaatgcgatccctttgga 361
||||||||||||||||||||||
Sbjct: 22 ggatcaatgcgatccctttgga 1
>42788_zma-MIR393c:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 341 gatcaatgcgatccctttgga 361
|||||||||||||||||||||
Sbjct: 22 gatcaatgcgatccctttgga 2
>42786_zma-MIR393a:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 341 gatcaatgcgatccctttgga 361
|||||||||||||||||||||
Sbjct: 41 gatcaatgcgatccctttgga 21
>42567_sbi-MIR393b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 341 gatcaatgcgatccctttgga 361
|||||||||||||||||||||
Sbjct: 21 gatcaatgcgatccctttgga 1
>41999_osa-MIR393b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 341 gatcaatgcgatccctttgga 361
|||||||||||||||||||||
Sbjct: 47 gatcaatgcgatccctttgga 27
>41998_osa-MIR393b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 341 gatcaatgcgatccctttgga 361
|||||||||||||||||||||
Sbjct: 47 gatcaatgcgatccctttgga 27
>41775_bdi-MIR393b:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 341 gatcaatgcgatccctttgga 361
|||||||||||||||||||||
Sbjct: 62 gatcaatgcgatccctttgga 42
>41420_ptc-MIR393d:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 341 gatcaatgcgatccctttgga 361
|||||||||||||||||||||
Sbjct: 31 gatcaatgcgatccctttgga 11
>41419_ptc-MIR393c:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 341 gatcaatgcgatccctttgga 361
|||||||||||||||||||||
Sbjct: 31 gatcaatgcgatccctttgga 11
>41133_tcc-MIR393b:mirbase
Length = 158
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 341 gatcaatgcgatccctttgga 361
|||||||||||||||||||||
Sbjct: 41 gatcaatgcgatccctttgga 21
>41054_ghr-MIR393:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 341 gatcaatgcgatccctttgga 361
|||||||||||||||||||||
Sbjct: 31 gatcaatgcgatccctttgga 11
>40373_rco-MIR393:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 341 gatcaatgcgatccctttgga 361
|||||||||||||||||||||
Sbjct: 26 gatcaatgcgatccctttgga 6
