miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41084_tcc-MIR156e:mirbase
          Length = 123

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                              
Query: 24 gttgacagaagatagagagcacatatgatgagatgc 59
          ||||||||||||||||||||||| ||||||||||||
Sbjct: 20 gttgacagaagatagagagcacagatgatgagatgc 55



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Plus

                                                        
Query: 89  gcatttcacttcatttgtgctctctatgcttccgtcatcaccttt 133
           |||||||||| | |||||||||||||| |||| ||||||||||||
Sbjct: 65  gcatttcactcc-tttgtgctctctattcttctgtcatcaccttt 108




>40010_ath-MIR157a:mirbase
          Length = 98

 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                            
Query: 24 gttgacagaagatagagagcacatatgatgagat 57
          ||||||||||||||||||||||| ||||||||||
Sbjct: 3  gttgacagaagatagagagcacagatgatgagat 36




>41525_sly-MIR156a:mirbase
          Length = 100

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 86  aaagcatttcacttcatttgtgctctctatgcttccgtcat 126
           ||||||| ||| ||||||||||||||||||||||| |||||
Sbjct: 60  aaagcatctcaattcatttgtgctctctatgcttctgtcat 100



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                               
Query: 25 ttgacagaagatagagagcacatatgatgagatgcta 61
          |||||||||||||||||||||  ||||||| ||||||
Sbjct: 1  ttgacagaagatagagagcactaatgatgatatgcta 37




>41569_vvi-MIR156i:mirbase
          Length = 103

 Score = 56.0 bits (28), Expect = 8e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                              
Query: 24 gttgacagaagatagagagcacatatgatgagatgc 59
          ||||||||||||||||||||||| ||||||| ||||
Sbjct: 10 gttgacagaagatagagagcacagatgatgaaatgc 45



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 102 tttgtgctctctatgcttccgtcatcacctt 132
           |||||||||||||| |||| |||||||||||
Sbjct: 67  tttgtgctctctattcttctgtcatcacctt 97




>41297_ptc-MIR156j:mirbase
          Length = 100

 Score = 56.0 bits (28), Expect = 8e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                              
Query: 24 gttgacagaagatagagagcacatatgatgagatgc 59
          ||||||||||||||||||||||| ||||||| ||||
Sbjct: 10 gttgacagaagatagagagcacagatgatgatatgc 45



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 102 tttgtgctctctatgcttccgtcatcac 129
           ||||||||||||||||||| ||||||||
Sbjct: 68  tttgtgctctctatgcttctgtcatcac 95




>41294_ptc-MIR156g:mirbase
          Length = 103

 Score = 56.0 bits (28), Expect = 8e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                              
Query: 24 gttgacagaagatagagagcacatatgatgagatgc 59
          ||||||||||||||||||||||| ||||||| ||||
Sbjct: 10 gttgacagaagatagagagcacagatgatgaaatgc 45




>40655_mtr-MIR156h:mirbase
          Length = 94

 Score = 56.0 bits (28), Expect = 8e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                              
Query: 24 gttgacagaagatagagagcacatatgatgagatgc 59
          ||||||||||||||||||||||| ||||||| ||||
Sbjct: 5  gttgacagaagatagagagcacagatgatgaaatgc 40




>40652_mtr-MIR156e:mirbase
          Length = 172

 Score = 56.0 bits (28), Expect = 8e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                              
Query: 24 gttgacagaagatagagagcacatatgatgagatgc 59
          ||||||||||||||||||||||| ||||||| ||||
Sbjct: 5  gttgacagaagatagagagcacagatgatgatatgc 40



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 102 tttgtgctctctatgcttccgtcatcacc 130
           ||||||||||||||||||| |||||||||
Sbjct: 144 tttgtgctctctatgcttctgtcatcacc 172




>40428_gma-MIR156d:mirbase
          Length = 151

 Score = 56.0 bits (28), Expect = 8e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                              
Query: 24 gttgacagaagatagagagcacatatgatgagatgc 59
          ||||||||||||||||||||||| ||||||| ||||
Sbjct: 20 gttgacagaagatagagagcacagatgatgatatgc 55



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 102 tttgtgctctctatgcttccgtcatcacctt 132
           |||||||||||||| |||| |||||||||||
Sbjct: 108 tttgtgctctctatacttctgtcatcacctt 138




>41567_vvi-MIR156g:mirbase
          Length = 103

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 24 gttgacagaagatagagagcacatatgatga 54
          ||||||||||||||||||||||| |||||||
Sbjct: 10 gttgacagaagatagagagcacagatgatga 40




>40337_rco-MIR156h:mirbase
          Length = 97

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 24 gttgacagaagatagagagcacatatgatga 54
          ||||||||||||||||||||||| |||||||
Sbjct: 5  gttgacagaagatagagagcacagatgatga 35



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 102 tttgtgctctctatgcttccgtcatcacctt 132
           ||||||||||||||||||| |||||||||||
Sbjct: 66  tttgtgctctctatgcttctgtcatcacctt 96




>41296_ptc-MIR156i:mirbase
          Length = 99

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 24 gttgacagaagatagagagcacatatgatg 53
          ||||||||||||||||||||||| ||||||
Sbjct: 10 gttgacagaagatagagagcacagatgatg 39



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 102 tttgtgctctctatgcttccgtcatcacctt 132
           ||||||||||||||||||| | |||||||||
Sbjct: 68  tttgtgctctctatgcttctgccatcacctt 98




>41163_aqc-MIR156b:mirbase
          Length = 83

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 26 tgacagaagatagagagcacatatgatgagatgc 59
          ||||||||||||||||||||| ||||||| ||||
Sbjct: 1  tgacagaagatagagagcacagatgatgatatgc 34



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 102 tttgtgctctctatgcttccgtcatc 127
           ||||||||||||||||||| ||||||
Sbjct: 58  tttgtgctctctatgcttctgtcatc 83




>41077_gra-MIR157b:mirbase
          Length = 91

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 24 gttgacagaagatagagagcacatatgatg 53
          ||||||||||||||||||||||| ||||||
Sbjct: 4  gttgacagaagatagagagcacagatgatg 33



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 102 tttgtgctctctatgcttccgtcatca 128
           ||||||||||||||||||| |||||||
Sbjct: 63  tttgtgctctctatgcttctgtcatca 89




>41076_gra-MIR157a:mirbase
          Length = 101

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 24 gttgacagaagatagagagcacatatgatg 53
          ||||||||||||||||||||||| ||||||
Sbjct: 4  gttgacagaagatagagagcacagatgatg 33




>40013_ath-MIR157d:mirbase
          Length = 221

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 104 tgtgctctctatgcttccgtcatcaccttt 133
           ||||||||||||||||| ||||||||||||
Sbjct: 172 tgtgctctctatgcttctgtcatcaccttt 201



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 26 tgacagaagatagagagcac 45
          ||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcac 43




>40011_ath-MIR157b:mirbase
          Length = 132

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 24 gttgacagaagatagagagcacatatgatgagat 57
          ||||||||||||||||||||||| ||||| ||||
Sbjct: 18 gttgacagaagatagagagcacagatgataagat 51




>39801_aly-MIR157d:mirbase
          Length = 256

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 104 tgtgctctctatgcttccgtcatcaccttt 133
           ||||||||||||||||| ||||||||||||
Sbjct: 190 tgtgctctctatgcttctgtcatcaccttt 219



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 26 tgacagaagatagagagcac 45
          ||||||||||||||||||||
Sbjct: 38 tgacagaagatagagagcac 57




>39798_aly-MIR157a:mirbase
          Length = 123

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 24 gttgacagaagatagagagcacatatgatgagat 57
          ||||||||||||||||||||||| ||||| ||||
Sbjct: 15 gttgacagaagatagagagcacagatgataagat 48



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 102 tttgtgctctctatgcttccgtcatcaccttt 133
           |||||||||||||  |||| ||||||||||||
Sbjct: 82  tttgtgctctctagccttctgtcatcaccttt 113




>40653_mtr-MIR156f:mirbase
          Length = 94

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 24 gttgacagaagatagagagcacat 47
          ||||||||||||||||||||||||
Sbjct: 5  gttgacagaagatagagagcacat 28




>40429_gma-MIR156e:mirbase
          Length = 124

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                              
Query: 24 gttgacagaagatagagagcacatatgatgagatgc 59
          ||||||||||||||||||||||  ||||||| ||||
Sbjct: 20 gttgacagaagatagagagcactgatgatgaaatgc 55




>40395_ahy-MIR156b:mirbase
          Length = 135

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                              
Query: 24 gttgacagaagatagagagcacatatgatgagatgc 59
          ||||||||||||||||||||||| | ||||| ||||
Sbjct: 22 gttgacagaagatagagagcacaaaagatgatatgc 57



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 102 tttgtgctctctatgcttccgtcatcac 129
           ||||||||||||| ||||| ||||||||
Sbjct: 89  tttgtgctctctaagcttctgtcatcac 116




>40394_ahy-MIR156b:mirbase
          Length = 135

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                              
Query: 24 gttgacagaagatagagagcacatatgatgagatgc 59
          ||||||||||||||||||||||| | ||||| ||||
Sbjct: 22 gttgacagaagatagagagcacaaaagatgatatgc 57



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 102 tttgtgctctctatgcttccgtcatcac 129
           ||||||||||||| ||||| ||||||||
Sbjct: 89  tttgtgctctctaagcttctgtcatcac 116




>39799_aly-MIR157b:mirbase
          Length = 97

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 24 gttgacagaagatagagagcacatatga 51
          ||||||||||||||||||||||| ||||
Sbjct: 3  gttgacagaagatagagagcacagatga 30



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 102 tttgtgctctctatgcttccgtcatcac 129
           ||||||||||||| ||||| ||||||||
Sbjct: 70  tttgtgctctctaagcttctgtcatcac 97




>41566_vvi-MIR156f:mirbase
          Length = 105

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 24 gttgacagaagatagagagcaca 46
          |||||||||||||||||||||||
Sbjct: 10 gttgacagaagatagagagcaca 32




>41085_tcc-MIR156f:mirbase
          Length = 124

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 24 gttgacagaagatagagagcaca 46
          |||||||||||||||||||||||
Sbjct: 20 gttgacagaagatagagagcaca 42




>40431_gma-MIR156g:mirbase
          Length = 118

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 24 gttgacagaagatagagagcaca 46
          |||||||||||||||||||||||
Sbjct: 23 gttgacagaagatagagagcaca 45



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 25  ttgacagaagatagagagcaca 46
           ||||||||||||||||||||||
Sbjct: 107 ttgacagaagatagagagcaca 86




>40427_gma-MIR156c:mirbase
          Length = 185

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 24  gttgacagaagatagagagcaca 46
           |||||||||||||||||||||||
Sbjct: 145 gttgacagaagatagagagcaca 167




>40335_rco-MIR156f:mirbase
          Length = 97

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 24 gttgacagaagatagagagcaca 46
          |||||||||||||||||||||||
Sbjct: 5  gttgacagaagatagagagcaca 27




>41295_ptc-MIR156h:mirbase
          Length = 103

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 24 gttgacagaagatagagagcac 45
          ||||||||||||||||||||||
Sbjct: 10 gttgacagaagatagagagcac 31




>41162_aqc-MIR156a:mirbase
          Length = 81

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 26 tgacagaagatagagagcacatatga 51
          ||||||||||||||||||||| ||||
Sbjct: 1  tgacagaagatagagagcacagatga 26



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 102 tttgtgctctctatgcttccgtca 125
           ||||||||||||||||||| ||||
Sbjct: 56  tttgtgctctctatgcttctgtca 79




>40654_mtr-MIR156g:mirbase
          Length = 120

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 89  gcatttcacttcatttgtgctctctatgcttccgtcatcacc 130
           |||||||| ||| |||||||||||||  |||| |||||||||
Sbjct: 79  gcatttcatttcctttgtgctctctagacttctgtcatcacc 120




>40336_rco-MIR156g:mirbase
          Length = 97

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 24 gttgacagaagatagagagcac 45
          ||||||||||||||||||||||
Sbjct: 5  gttgacagaagatagagagcac 26




>40310_bra-MIR157a:mirbase
          Length = 149

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 24 gttgacagaagatagagagcac 45
          ||||||||||||||||||||||
Sbjct: 13 gttgacagaagatagagagcac 34




>40304_bol-MIR157a:mirbase
          Length = 106

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 24 gttgacagaagatagagagcac 45
          ||||||||||||||||||||||
Sbjct: 5  gttgacagaagatagagagcac 26




>40260_bna-MIR156c:mirbase
          Length = 155

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 24 gttgacagaagatagagagcac 45
          ||||||||||||||||||||||
Sbjct: 17 gttgacagaagatagagagcac 38




>40259_bna-MIR156b:mirbase
          Length = 208

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 24 gttgacagaagatagagagcac 45
          ||||||||||||||||||||||
Sbjct: 24 gttgacagaagatagagagcac 45




>40012_ath-MIR157c:mirbase
          Length = 217

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 24 gttgacagaagatagagagcac 45
          ||||||||||||||||||||||
Sbjct: 23 gttgacagaagatagagagcac 44



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 102 tttgtgctctctatgcttccgtcatcaccttta 134
           |||||||||||||| |||| |||| ||||||||
Sbjct: 165 tttgtgctctctatacttctgtcaccaccttta 197




>39800_aly-MIR157c:mirbase
          Length = 293

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 24 gttgacagaagatagagagcac 45
          ||||||||||||||||||||||
Sbjct: 54 gttgacagaagatagagagcac 75



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 102 tttgtgctctctatgcttccgtcatcaccttta 134
           |||||||||||||| |||| |||| ||||||||
Sbjct: 216 tttgtgctctctatacttctgtcaccaccttta 248




>39415_pta-MIR156a:mirbase
          Length = 83

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 26 tgacagaagatagagagcacat 47
          ||||||||||||||||||||||
Sbjct: 3  tgacagaagatagagagcacat 24




>41867_far-MIR156b:mirbase
          Length = 180

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 22 gagttgacagaagatagagagcaca 46
          |||||||||||||| ||||||||||
Sbjct: 50 gagttgacagaagagagagagcaca 74




>41866_far-MIR156a:mirbase
          Length = 180

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 22 gagttgacagaagatagagagcaca 46
          |||||||||||||| ||||||||||
Sbjct: 50 gagttgacagaagagagagagcaca 74




>41726_bdi-MIR156:mirbase
          Length = 147

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 22  gagttgacagaagatagagagcaca 46
           |||||||||||||| ||||||||||
Sbjct: 97  gagttgacagaagagagagagcaca 121




>41527_sly-MIR156c:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 25 ttgacagaagatagagagcac 45
          |||||||||||||||||||||
Sbjct: 1  ttgacagaagatagagagcac 21




>41526_sly-MIR156b:mirbase
          Length = 84

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 25 ttgacagaagatagagagcac 45
          |||||||||||||||||||||
Sbjct: 1  ttgacagaagatagagagcac 21




>39727_smo-MIR156b:mirbase
          Length = 112

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 26 tgacagaagatagagagcaca 46
          |||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcaca 32




>39416_pta-MIR156b:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 26 tgacagaagatagagagcaca 46
          |||||||||||||||||||||
Sbjct: 3  tgacagaagatagagagcaca 23