miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41126_tcc-MIR172c:mirbase
          Length = 163

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 10  atatgttagatgatgcagcatcatcaagattccca 44
           ||||||| | |||||||||||||||||||||||||
Sbjct: 155 atatgtttgctgatgcagcatcatcaagattccca 121



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 126 tttgtgaatcttgatgatgttgcatcctcaaacactgac 164
           |||||||||||||||||||  |||||  |||||||||||
Sbjct: 45  tttgtgaatcttgatgatgccgcatctgcaaacactgac 7




>41124_tcc-MIR172a:mirbase
          Length = 154

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 122 aagttttgtgaatcttgatgatgttgcatcctcaaacactgactg 166
           ||||||||||||||||||||||| | ||||  |||||| ||||||
Sbjct: 46  aagttttgtgaatcttgatgatgctccatcagcaaacagtgactg 2



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 23  tgcagcatcatcaagattccca 44
           ||||||||||||||||||||||
Sbjct: 134 tgcagcatcatcaagattccca 113



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 20 tgatgcagcatcatcaagattcccaaaa 47
          ||||| |||||||||||||||| |||||
Sbjct: 16 tgatggagcatcatcaagattcacaaaa 43




>40067_ath-MIR172e:mirbase
          Length = 125

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 20  tgatgcagcatcatcaagattccca 44
           |||||||||||||||||||||||||
Sbjct: 117 tgatgcagcatcatcaagattccca 93




>39856_aly-MIR172e:mirbase
          Length = 133

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 20  tgatgcagcatcatcaagattccca 44
           |||||||||||||||||||||||||
Sbjct: 120 tgatgcagcatcatcaagattccca 96




>41991_osa-MIR172b:mirbase
          Length = 238

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 21  gatgcagcatcatcaagattccca 44
           ||||||||||||||||||||||||
Sbjct: 229 gatgcagcatcatcaagattccca 206




>41768_bdi-MIR172b:mirbase
          Length = 254

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 21  gatgcagcatcatcaagattccca 44
           ||||||||||||||||||||||||
Sbjct: 225 gatgcagcatcatcaagattccca 202




>41634_vvi-MIR172d:mirbase
          Length = 109

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 14 gttagatgatgcagcatcatcaagattc 41
          ||||| ||||||||||||||||||||||
Sbjct: 1  gttagctgatgcagcatcatcaagattc 28



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 128 tgtgaatcttgatgatgttgcatc 151
           ||||||||||||||||| ||||||
Sbjct: 31  tgtgaatcttgatgatgctgcatc 8



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 22 atgcagcatcatcaagattc 41
          ||||||||||||||||||||
Sbjct: 99 atgcagcatcatcaagattc 80




>41399_ptc-MIR172e:mirbase
          Length = 133

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 21  gatgcagcatcatcaagattccca 44
           ||||||||||||||||||||||||
Sbjct: 125 gatgcagcatcatcaagattccca 102




>41398_ptc-MIR172d:mirbase
          Length = 182

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 21  gatgcagcatcatcaagattccca 44
           ||||||||||||||||||||||||
Sbjct: 174 gatgcagcatcatcaagattccca 151




>41184_aqc-MIR172b:mirbase
          Length = 108

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 21  gatgcagcatcatcaagattccca 44
           ||||||||||||||||||||||||
Sbjct: 107 gatgcagcatcatcaagattccca 84




>42779_zma-MIR172e:mirbase
          Length = 174

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 22  atgcagcatcatcaagattccca 44
           |||||||||||||||||||||||
Sbjct: 155 atgcagcatcatcaagattccca 133




>42558_sbi-MIR172b:mirbase
          Length = 170

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 22  atgcagcatcatcaagattccca 44
           |||||||||||||||||||||||
Sbjct: 170 atgcagcatcatcaagattccca 148




>41402_ptc-MIR172h:mirbase
          Length = 143

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 23  tgcagcatcatcaagattcccaa 45
           |||||||||||||||||||||||
Sbjct: 133 tgcagcatcatcaagattcccaa 111




>41401_ptc-MIR172g:mirbase
          Length = 143

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 23  tgcagcatcatcaagattcccaa 45
           |||||||||||||||||||||||
Sbjct: 133 tgcagcatcatcaagattcccaa 111




>41993_osa-MIR172d:mirbase
          Length = 130

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 20  tgatgcagcatcatcaagattc 41
           ||||||||||||||||||||||
Sbjct: 113 tgatgcagcatcatcaagattc 92




>41633_vvi-MIR172c:mirbase
          Length = 138

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 23  tgcagcatcatcaagattccca 44
           ||||||||||||||||||||||
Sbjct: 127 tgcagcatcatcaagattccca 106



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 127 ttgtgaatcttgatgatgttgcatcctcaaac 158
           |||||||||||||||||| | ||||| |||||
Sbjct: 32  ttgtgaatcttgatgatgctccatccgcaaac 1




>41397_ptc-MIR172c:mirbase
          Length = 128

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 20  tgatgcagcatcatcaagattc 41
           ||||||||||||||||||||||
Sbjct: 121 tgatgcagcatcatcaagattc 100




>41395_ptc-MIR172a:mirbase
          Length = 129

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 20  tgatgcagcatcatcaagattc 41
           ||||||||||||||||||||||
Sbjct: 122 tgatgcagcatcatcaagattc 101




>41183_aqc-MIR172a:mirbase
          Length = 135

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 20  tgatgcagcatcatcaagattc 41
           ||||||||||||||||||||||
Sbjct: 120 tgatgcagcatcatcaagattc 99




>40463_gma-MIR172f:mirbase
          Length = 133

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 20  tgatgcagcatcatcaagattc 41
           ||||||||||||||||||||||
Sbjct: 131 tgatgcagcatcatcaagattc 110




>40462_gma-MIR172e:mirbase
          Length = 153

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 23  tgcagcatcatcaagattccca 44
           ||||||||||||||||||||||
Sbjct: 133 tgcagcatcatcaagattccca 112




>40461_gma-MIR172d:mirbase
          Length = 150

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 23  tgcagcatcatcaagattccca 44
           ||||||||||||||||||||||
Sbjct: 130 tgcagcatcatcaagattccca 109




>40460_gma-MIR172c:mirbase
          Length = 153

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 23  tgcagcatcatcaagattccca 44
           ||||||||||||||||||||||
Sbjct: 133 tgcagcatcatcaagattccca 112




>40459_gma-MIR172b:mirbase
          Length = 153

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 20  tgatgcagcatcatcaagattc 41
           ||||||||||||||||||||||
Sbjct: 136 tgatgcagcatcatcaagattc 115



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 128 tgtgaatcttgatgatgttgcatcctcaaaca 159
           ||||||||||||||||| | ||||| ||||||
Sbjct: 43  tgtgaatcttgatgatgctacatccgcaaaca 12




>40458_gma-MIR172a:mirbase
          Length = 159

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 20  tgatgcagcatcatcaagattc 41
           ||||||||||||||||||||||
Sbjct: 142 tgatgcagcatcatcaagattc 121




>40366_rco-MIR172:mirbase
          Length = 144

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 23  tgcagcatcatcaagattccca 44
           ||||||||||||||||||||||
Sbjct: 138 tgcagcatcatcaagattccca 117




>40324_bra-MIR172b:mirbase
          Length = 107

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 20  tgatgcagcatcatcaagattc 41
           ||||||||||||||||||||||
Sbjct: 104 tgatgcagcatcatcaagattc 83




>40323_bra-MIR172a:mirbase
          Length = 119

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 20  tgatgcagcatcatcaagattc 41
           ||||||||||||||||||||||
Sbjct: 109 tgatgcagcatcatcaagattc 88




>40307_bol-MIR172b:mirbase
          Length = 107

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 20  tgatgcagcatcatcaagattc 41
           ||||||||||||||||||||||
Sbjct: 104 tgatgcagcatcatcaagattc 83




>40306_bol-MIR172a:mirbase
          Length = 119

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 20  tgatgcagcatcatcaagattc 41
           ||||||||||||||||||||||
Sbjct: 109 tgatgcagcatcatcaagattc 88




>40064_ath-MIR172b:mirbase
          Length = 95

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 20 tgatgcagcatcatcaagattc 41
          ||||||||||||||||||||||
Sbjct: 93 tgatgcagcatcatcaagattc 72




>39853_aly-MIR172b:mirbase
          Length = 146

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 20  tgatgcagcatcatcaagattc 41
           ||||||||||||||||||||||
Sbjct: 115 tgatgcagcatcatcaagattc 94




>41990_osa-MIR172a:mirbase
          Length = 109

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 21  gatgcagcatcatcaagattc 41
           |||||||||||||||||||||
Sbjct: 100 gatgcagcatcatcaagattc 80




>41767_bdi-MIR172a:mirbase
          Length = 153

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 21  gatgcagcatcatcaagattc 41
           |||||||||||||||||||||
Sbjct: 120 gatgcagcatcatcaagattc 100




>41725_ata-MIR172:mirbase
          Length = 277

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 21  gatgcagcatcatcaagattc 41
           |||||||||||||||||||||
Sbjct: 230 gatgcagcatcatcaagattc 210




>41632_vvi-MIR172b:mirbase
          Length = 118

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 gatgcagcatcatcaagattc 41
          |||||||||||||||||||||
Sbjct: 8  gatgcagcatcatcaagattc 28




>41631_vvi-MIR172a:mirbase
          Length = 110

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 gatgcagcatcatcaagattc 41
          |||||||||||||||||||||
Sbjct: 8  gatgcagcatcatcaagattc 28




>41400_ptc-MIR172f:mirbase
          Length = 161

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 21  gatgcagcatcatcaagattc 41
           |||||||||||||||||||||
Sbjct: 153 gatgcagcatcatcaagattc 133




>41396_ptc-MIR172b:mirbase
          Length = 140

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 21  gatgcagcatcatcaagattc 41
           |||||||||||||||||||||
Sbjct: 132 gatgcagcatcatcaagattc 112




>41128_tcc-MIR172e:mirbase
          Length = 189

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 21  gatgcagcatcatcaagattc 41
           |||||||||||||||||||||
Sbjct: 170 gatgcagcatcatcaagattc 150




>41125_tcc-MIR172b:mirbase
          Length = 160

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 21  gatgcagcatcatcaagattc 41
           |||||||||||||||||||||
Sbjct: 141 gatgcagcatcatcaagattc 121




>40063_ath-MIR172a:mirbase
          Length = 102

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 21 gatgcagcatcatcaagattc 41
          |||||||||||||||||||||
Sbjct: 99 gatgcagcatcatcaagattc 79




>39852_aly-MIR172a:mirbase
          Length = 149

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 21  gatgcagcatcatcaagattc 41
           |||||||||||||||||||||
Sbjct: 120 gatgcagcatcatcaagattc 100




>42778_zma-MIR172d:mirbase
          Length = 74

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 22 atgcagcatcatcaagattc 41
          ||||||||||||||||||||
Sbjct: 74 atgcagcatcatcaagattc 55




>42777_zma-MIR172c:mirbase
          Length = 123

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 22  atgcagcatcatcaagattc 41
           ||||||||||||||||||||
Sbjct: 123 atgcagcatcatcaagattc 104




>42776_zma-MIR172b:mirbase
          Length = 126

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 22  atgcagcatcatcaagattc 41
           ||||||||||||||||||||
Sbjct: 126 atgcagcatcatcaagattc 107




>42775_zma-MIR172a:mirbase
          Length = 83

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 22 atgcagcatcatcaagattc 41
          ||||||||||||||||||||
Sbjct: 83 atgcagcatcatcaagattc 64




>42560_sbi-MIR172d:mirbase
          Length = 88

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 22 atgcagcatcatcaagattc 41
          ||||||||||||||||||||
Sbjct: 88 atgcagcatcatcaagattc 69




>42559_sbi-MIR172c:mirbase
          Length = 119

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 22  atgcagcatcatcaagattc 41
           ||||||||||||||||||||
Sbjct: 119 atgcagcatcatcaagattc 100




>42557_sbi-MIR172a:mirbase
          Length = 102

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 22  atgcagcatcatcaagattc 41
           ||||||||||||||||||||
Sbjct: 102 atgcagcatcatcaagattc 83




>41543_sly-MIR172b:mirbase
          Length = 135

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 22  atgcagcatcatcaagattc 41
           ||||||||||||||||||||
Sbjct: 135 atgcagcatcatcaagattc 116




>41542_sly-MIR172a:mirbase
          Length = 106

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 22  atgcagcatcatcaagattc 41
           ||||||||||||||||||||
Sbjct: 106 atgcagcatcatcaagattc 87




>41235_csi-MIR172c:mirbase
          Length = 163

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 23  tgcagcatcatcaagattcc 42
           ||||||||||||||||||||
Sbjct: 139 tgcagcatcatcaagattcc 120




>40066_ath-MIR172d:mirbase
          Length = 124

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 23  tgcagcatcatcaagattcccaaa 46
           ||||||||||||||||||| ||||
Sbjct: 107 tgcagcatcatcaagattctcaaa 84




>39855_aly-MIR172d:mirbase
          Length = 163

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 23  tgcagcatcatcaagattcccaaa 46
           ||||||||||||||||||| ||||
Sbjct: 131 tgcagcatcatcaagattctcaaa 108