miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33192_bta-mir-105a:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
Query: 61 gagcatgtgctacggtgtcta 81
|||||||||||||||||||||
Sbjct: 61 gagcatgtgctacggtgtcta 81
>33963_ssc-mir-105-1:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
Query: 61 gagcatgtgctacggtgtcta 81
|||||||||||||||||||||
Sbjct: 61 gagcatgtgctacggtgtcta 81
>27566_lla-mir-105:mirbase
Length = 81
Score = 153 bits (77), Expect = 2e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 1 tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
Query: 61 gagcatgtgctacggtgtcta 81
|||||||||||||||||||||
Sbjct: 61 gagcatgtgctacggtgtcta 81
>27612_sla-mir-105:mirbase
Length = 81
Score = 153 bits (77), Expect = 2e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 1 tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
Query: 61 gagcatgtgctacggtgtcta 81
|||||||||||||||||||||
Sbjct: 61 gagcatgtgctacggtgtcta 81
>27709_mml-mir-105-1:mirbase
Length = 81
Score = 153 bits (77), Expect = 2e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 1 tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
Query: 61 gagcatgtgctacggtgtcta 81
|||||||||||||||||||||
Sbjct: 61 gagcatgtgctacggtgtcta 81
>28204_mne-mir-105:mirbase
Length = 81
Score = 153 bits (77), Expect = 2e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 1 tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
Query: 61 gagcatgtgctacggtgtcta 81
|||||||||||||||||||||
Sbjct: 61 gagcatgtgctacggtgtcta 81
>28296_ggo-mir-105:mirbase
Length = 81
Score = 153 bits (77), Expect = 2e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 1 tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
Query: 61 gagcatgtgctacggtgtcta 81
|||||||||||||||||||||
Sbjct: 61 gagcatgtgctacggtgtcta 81
>28421_hsa-mir-105-1:mirbase
Length = 81
Score = 153 bits (77), Expect = 2e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 1 tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
Query: 61 gagcatgtgctacggtgtcta 81
|||||||||||||||||||||
Sbjct: 61 gagcatgtgctacggtgtcta 81
>30083_ppa-mir-105:mirbase
Length = 81
Score = 153 bits (77), Expect = 2e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 1 tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
Query: 61 gagcatgtgctacggtgtcta 81
|||||||||||||||||||||
Sbjct: 61 gagcatgtgctacggtgtcta 81
>30809_ppy-mir-105:mirbase
Length = 81
Score = 153 bits (77), Expect = 2e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 1 tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
Query: 61 gagcatgtgctacggtgtcta 81
|||||||||||||||||||||
Sbjct: 61 gagcatgtgctacggtgtcta 81
>27001_eca-mir-105:mirbase
Length = 81
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 1 tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 1 tgtgcatcgtagtcaaatgctcagactcctgtggtggccgttcatgcaccacggatgttt 60
Query: 61 gagcatgtgctacggtgtcta 81
|||||||||||| ||||||||
Sbjct: 61 gagcatgtgctatggtgtcta 81
>27710_mml-mir-105-2:mirbase
Length = 81
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 1 tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
|||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 tgtgcatcgtggtcaaatgctcagactcctgtggtggctgcttatgcaccacggatgttt 60
Query: 61 gagcatgtgctacggtgtcta 81
|||||||||||| ||||||||
Sbjct: 61 gagcatgtgctatggtgtcta 81
>28422_hsa-mir-105-2:mirbase
Length = 81
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 1 tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
|||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 tgtgcatcgtggtcaaatgctcagactcctgtggtggctgcttatgcaccacggatgttt 60
Query: 61 gagcatgtgctacggtgtcta 81
|||||||||||| ||||||||
Sbjct: 61 gagcatgtgctatggtgtcta 81
>30203_ptr-mir-105:mirbase
Length = 81
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 1 tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
|||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 tgtgcatcgtggtcaaatgctcagactcctgtggtggctgcttatgcaccacggatgttt 60
Query: 61 gagcatgtgctacggtgtcta 81
|||||||||||| ||||||||
Sbjct: 61 gagcatgtgctatggtgtcta 81
>30810_ppy-mir-105-2:mirbase
Length = 81
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 1 tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
|||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 tgtgcatcgtggtcaaatgctcagactcctgtggtggctgcttatgcaccacggatgttt 60
Query: 61 gagcatgtgctacggtgtcta 81
|||||||||||| ||||||||
Sbjct: 61 gagcatgtgctatggtgtcta 81
>33964_ssc-mir-105-2:mirbase
Length = 80
Score = 121 bits (61), Expect = 8e-29
Identities = 77/81 (95%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 1 tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
|||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 1 tgtgcatcgtggtcaaatgctcagactcct-tggtggctgcttatgcaccacggatgttt 59
Query: 61 gagcatgtgctacggtgtcta 81
|||||||||||| ||||||||
Sbjct: 60 gagcatgtgctatggtgtcta 80
>33193_bta-mir-105b:mirbase
Length = 80
Score = 113 bits (57), Expect = 2e-26
Identities = 76/81 (93%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 1 tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
|||||||||| ||||||||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 1 tgtgcatcgtggtcaaatgctcagactcct-tggtggctgcttatgcaccatggatgttt 59
Query: 61 gagcatgtgctacggtgtcta 81
|||||||||||| ||||||||
Sbjct: 60 gagcatgtgctatggtgtcta 80
>26681_cfa-mir-105b:mirbase
Length = 80
Score = 97.6 bits (49), Expect = 1e-21
Identities = 74/81 (91%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 1 tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
|||||||| | ||||||||||||||||||| ||||||||||| |||||||| | ||||||
Sbjct: 1 tgtgcatcatggtcaaatgctcagactcct-tggtggctgcttatgcaccatgaatgttt 59
Query: 61 gagcatgtgctacggtgtcta 81
|||||||||||| ||||||||
Sbjct: 60 gagcatgtgctatggtgtcta 80
>32713_rno-mir-105:mirbase
Length = 73
Score = 71.9 bits (36), Expect = 7e-14
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 10 tagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgtttgagcatgtg 69
||||||| |||||||| |||||||||||||| ||| | ||||||||||||||||||||
Sbjct: 1 tagtcaagtgctcagatgtctgtggtggctgcttatgtatcacggatgtttgagcatgtg 60
Query: 70 ctacggtgtcta 81
||| ||| ||||
Sbjct: 61 ctatggtatcta 72
>31833_mmu-mir-105:mirbase
Length = 80
Score = 61.9 bits (31), Expect = 6e-11
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 30 tgtggtggctgctcatgcaccacggatgtttgagcatgtgcta 72
||||||||||||| |||||||||| ||| ||||||||||||||
Sbjct: 28 tgtggtggctgcttatgcaccacgaatgcttgagcatgtgcta 70
