miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41252_csi-MIR408:mirbase
          Length = 153

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 68  ccatgcactgcctcttccctggctctc 94
           |||||||||||||||||||||||||||
Sbjct: 118 ccatgcactgcctcttccctggctctc 144




>41683_vvi-MIR408:mirbase
          Length = 107

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 68  ccatgcactgcctcttccctggctct 93
           ||||||||||||||||||||||||||
Sbjct: 75  ccatgcactgcctcttccctggctct 100




>41193_aqc-MIR408:mirbase
          Length = 87

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                    
Query: 66 ttccatgcactgcctcttccctggct 91
          ||||||||||||||||||||||||||
Sbjct: 26 ttccatgcactgcctcttccctggct 1




>40405_ahy-MIR408:mirbase
          Length = 122

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 69  catgcactgcctcttccctggctctc 94
           ||||||||||||||||||||||||||
Sbjct: 80  catgcactgcctcttccctggctctc 105




>40404_ahy-MIR408:mirbase
          Length = 122

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 69  catgcactgcctcttccctggctctc 94
           ||||||||||||||||||||||||||
Sbjct: 80  catgcactgcctcttccctggctctc 105




>40108_ath-MIR408:mirbase
          Length = 218

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 68  ccatgcactgcctcttccctggctc 92
           |||||||||||||||||||||||||
Sbjct: 118 ccatgcactgcctcttccctggctc 142




>39897_aly-MIR408:mirbase
          Length = 211

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 68  ccatgcactgcctcttccctggctc 92
           |||||||||||||||||||||||||
Sbjct: 115 ccatgcactgcctcttccctggctc 139




>41463_ptc-MIR408:mirbase
          Length = 105

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 68 ccatgcactgcctcttccctggct 91
          ||||||||||||||||||||||||
Sbjct: 74 ccatgcactgcctcttccctggct 97




>42647_tae-MIR408:mirbase
          Length = 187

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 71  tgcactgcctcttccctggctctcctc 97
           |||||||||||||||||||||| ||||
Sbjct: 137 tgcactgcctcttccctggctcccctc 163




>39490_ppt-MIR408b:mirbase
          Length = 144

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 69  catgcactgcctcttccctggct 91
           |||||||||||||||||||||||
Sbjct: 92  catgcactgcctcttccctggct 114




>39428_pta-MIR408:mirbase
          Length = 86

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 70 atgcactgcctcttccctggctc 92
          |||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggctc 86




>42830_zma-MIR408b:mirbase
          Length = 147

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 71  tgcactgcctcttccctggctc 92
           ||||||||||||||||||||||
Sbjct: 126 tgcactgcctcttccctggctc 147




>42829_zma-MIR408:mirbase
          Length = 191

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 71  tgcactgcctcttccctggctc 92
           ||||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggctc 174




>42474_ssp-MIR408d:mirbase
          Length = 180

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 71  tgcactgcctcttccctggctc 92
           ||||||||||||||||||||||
Sbjct: 159 tgcactgcctcttccctggctc 180




>42473_ssp-MIR408a:mirbase
          Length = 248

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 71  tgcactgcctcttccctggctc 92
           ||||||||||||||||||||||
Sbjct: 227 tgcactgcctcttccctggctc 248




>42465_sof-MIR408d:mirbase
          Length = 215

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 71  tgcactgcctcttccctggctc 92
           ||||||||||||||||||||||
Sbjct: 177 tgcactgcctcttccctggctc 198




>42464_sof-MIR408c:mirbase
          Length = 286

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 71  tgcactgcctcttccctggctc 92
           ||||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggctc 269




>42463_sof-MIR408b:mirbase
          Length = 286

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 71  tgcactgcctcttccctggctc 92
           ||||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggctc 269




>42462_sof-MIR408a:mirbase
          Length = 283

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 71  tgcactgcctcttccctggctc 92
           ||||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggctc 266




>42052_osa-MIR408:mirbase
          Length = 213

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 71  tgcactgcctcttccctggctc 92
           ||||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggctc 175




>39742_smo-MIR408:mirbase
          Length = 109

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 70 atgcactgcctcttccctggct 91
          ||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97




>42600_sbi-MIR408:mirbase
          Length = 205

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 71  tgcactgcctcttccctggct 91
           |||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205




>40391_rco-MIR408:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 71 tgcactgcctcttccctggct 91
          |||||||||||||||||||||
Sbjct: 68 tgcactgcctcttccctggct 88