miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>27634_mml-let-7d:mirbase
          Length = 87

 Score =  165 bits (83), Expect = 6e-42
 Identities = 86/87 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1  cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60

                                     
Query: 61 actatacgacctgctgcctttcttagg 87
          |||||||||||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87




>28344_hsa-let-7d:mirbase
          Length = 87

 Score =  165 bits (83), Expect = 6e-42
 Identities = 86/87 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1  cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60

                                     
Query: 61 actatacgacctgctgcctttcttagg 87
          |||||||||||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87




>30736_ppy-let-7d:mirbase
          Length = 87

 Score =  165 bits (83), Expect = 6e-42
 Identities = 86/87 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1  cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60

                                     
Query: 61 actatacgacctgctgcctttcttagg 87
          |||||||||||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87




>30131_ptr-let-7d:mirbase
          Length = 86

 Score =  163 bits (82), Expect = 3e-41
 Identities = 85/86 (98%)
 Strand = Plus / Plus

                                                                      
Query: 2  ctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagataa 61
          |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1  ctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggtaa 60

                                    
Query: 62 ctatacgacctgctgcctttcttagg 87
          ||||||||||||||||||||||||||
Sbjct: 61 ctatacgacctgctgcctttcttagg 86




>27322_mdo-let-7d:mirbase
          Length = 106

 Score =  157 bits (79), Expect = 2e-39
 Identities = 85/87 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 9  cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagtta 68

                                     
Query: 61 actatacgacctgctgcctttcttagg 87
          ||||||| |||||||||||||||||||
Sbjct: 69 actatacaacctgctgcctttcttagg 95




>31757_mmu-let-7d:mirbase
          Length = 103

 Score =  157 bits (79), Expect = 2e-39
 Identities = 85/87 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
          |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 9  cctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaaggagtta 68

                                     
Query: 61 actatacgacctgctgcctttcttagg 87
          |||||||||||||||||||||||||||
Sbjct: 69 actatacgacctgctgcctttcttagg 95




>32643_rno-let-7d:mirbase
          Length = 98

 Score =  157 bits (79), Expect = 2e-39
 Identities = 85/87 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
          |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 7  cctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaaggagtta 66

                                     
Query: 61 actatacgacctgctgcctttcttagg 87
          |||||||||||||||||||||||||||
Sbjct: 67 actatacgacctgctgcctttcttagg 93




>33099_rno-mir-3596b:mirbase
          Length = 95

 Score =  157 bits (79), Expect = 2e-39
 Identities = 85/87 (97%)
 Strand = Plus / Minus

                                                                      
Query: 1  cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
          |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 90 cctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaaggagtta 31

                                     
Query: 61 actatacgacctgctgcctttcttagg 87
          |||||||||||||||||||||||||||
Sbjct: 30 actatacgacctgctgcctttcttagg 4




>33113_bta-let-7d:mirbase
          Length = 87

 Score =  157 bits (79), Expect = 2e-39
 Identities = 85/87 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
          ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 1  cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 60

                                     
Query: 61 actatacgacctgctgcctttcttagg 87
          |||||||||||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87




>25873_gga-let-7d:mirbase
          Length = 103

 Score =  141 bits (71), Expect = 9e-35
 Identities = 83/87 (95%)
 Strand = Plus / Plus

                                                                      
Query: 1  cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
          |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 9  cctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaaggaggta 68

                                     
Query: 61 actatacgacctgctgcctttcttagg 87
          ||||||| |||||||||||||||||||
Sbjct: 69 actatacaacctgctgcctttcttagg 95




>26382_tgu-let-7d:mirbase
          Length = 92

 Score =  141 bits (71), Expect = 9e-35
 Identities = 83/87 (95%)
 Strand = Plus / Plus

                                                                      
Query: 1  cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
          ||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||
Sbjct: 4  cctaggaagaggtagtaggttgcatagttttagggcagggattttgctcagaaggaggta 63

                                     
Query: 61 actatacgacctgctgcctttcttagg 87
          ||||||| |||||||||||||||||||
Sbjct: 64 actatacaacctgctgcctttcttagg 90




>31411_oan-let-7d:mirbase
          Length = 116

 Score =  125 bits (63), Expect = 5e-30
 Identities = 81/87 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
           |||||||||||||||||||||||||||||||||||||| |||||||| || |||| | ||
Sbjct: 17  cctaggaagaggtagtaggttgcatagttttagggcagtgattttgctcataaggtgtta 76

                                      
Query: 61  actatacgacctgctgcctttcttagg 87
           ||||||| |||||||||||||||||||
Sbjct: 77  actatacaacctgctgcctttcttagg 103




>25871_gga-let-7b:mirbase
          Length = 85

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 66/79 (83%), Gaps = 2/79 (2%)
 Strand = Plus / Plus

                                                                      
Query: 4  aggaagaggtagtaggttgcatagttttagggcagggattttgcccaca--aggagataa 61
          |||| ||||||||||||||  | |||| |||| || ||||||||||  |  |||||||||
Sbjct: 2  aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 61

                             
Query: 62 ctatacgacctgctgcctt 80
          |||||| |||| |||||||
Sbjct: 62 ctatacaacctactgcctt 80




>26375_tgu-let-7a-1:mirbase
          Length = 92

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 9  gaggtagtaggttgcatagttttagggc 36
          |||||||||||||| |||||||||||||
Sbjct: 12 gaggtagtaggttgtatagttttagggc 39




>26379_tgu-let-7b:mirbase
          Length = 92

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 66/79 (83%), Gaps = 2/79 (2%)
 Strand = Plus / Plus

                                                                      
Query: 4  aggaagaggtagtaggttgcatagttttagggcagggattttgcccaca--aggagataa 61
          |||| ||||||||||||||  | |||| |||| || ||||||||||  |  |||||||||
Sbjct: 7  aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 66

                             
Query: 62 ctatacgacctgctgcctt 80
          |||||| |||| |||||||
Sbjct: 67 ctatacaacctactgcctt 85




>27632_mml-let-7b:mirbase
          Length = 83

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                      
Query: 9  gaggtagtaggttgcatagttttagggcagggattttgcccacaaggagataactatacg 68
          ||||||||||||||  | |||| ||||||| ||| ||||||   || |||||||||||| 
Sbjct: 7  gaggtagtaggttgtgtggtttcagggcagtgatgttgcccctcagaagataactataca 66

                      
Query: 69 acctgctgcctt 80
          |||| |||||||
Sbjct: 67 acctactgcctt 78




>30129_ptr-let-7b:mirbase
          Length = 82

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                      
Query: 9  gaggtagtaggttgcatagttttagggcagggattttgcccacaaggagataactatacg 68
          ||||||||||||||  | |||| ||||||| ||| ||||||   || |||||||||||| 
Sbjct: 6  gaggtagtaggttgtgtggtttcagggcagtgatgttgcccctcagaagataactataca 65

                      
Query: 69 acctgctgcctt 80
          |||| |||||||
Sbjct: 66 acctactgcctt 77




>30734_ppy-let-7b:mirbase
          Length = 83

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                      
Query: 9  gaggtagtaggttgcatagttttagggcagggattttgcccacaaggagataactatacg 68
          ||||||||||||||  | |||| ||||||| ||| ||||||   || |||||||||||| 
Sbjct: 7  gaggtagtaggttgtgtggtttcagggcagtgatgttgcccctcagaagataactataca 66

                      
Query: 69 acctgctgcctt 80
          |||| |||||||
Sbjct: 67 acctactgcctt 78




>25868_gga-let-7a-1:mirbase
          Length = 90

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||||||| ||||||||||||
Sbjct: 14 gaggtagtaggttgtatagttttaggg 40




>25870_gga-let-7a-3:mirbase
          Length = 76

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||||||| ||||||||||||
Sbjct: 5  gaggtagtaggttgtatagttttaggg 31




>26377_tgu-let-7a-3:mirbase
          Length = 92

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||||||| ||||||||||||
Sbjct: 62 gaggtagtaggttgtatagttttaggg 88




>27318_mdo-let-7a-1:mirbase
          Length = 92

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||||||| ||||||||||||
Sbjct: 16 gaggtagtaggttgtatagttttaggg 42




>27629_mml-let-7a-1:mirbase
          Length = 80

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||||||| ||||||||||||
Sbjct: 7  gaggtagtaggttgtatagttttaggg 33




>28339_hsa-let-7a-1:mirbase
          Length = 80

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||||||| ||||||||||||
Sbjct: 7  gaggtagtaggttgtatagttttaggg 33




>30126_ptr-let-7a-1:mirbase
          Length = 79

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||||||| ||||||||||||
Sbjct: 6  gaggtagtaggttgtatagttttaggg 32




>30731_ppy-let-7a-1:mirbase
          Length = 80

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||||||| ||||||||||||
Sbjct: 7  gaggtagtaggttgtatagttttaggg 33




>31752_mmu-let-7a-1:mirbase
          Length = 94

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||||||| ||||||||||||
Sbjct: 14 gaggtagtaggttgtatagttttaggg 40




>32638_rno-let-7a-1:mirbase
          Length = 94

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||||||| ||||||||||||
Sbjct: 14 gaggtagtaggttgtatagttttaggg 40




>33108_bta-let-7a-1:mirbase
          Length = 80

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||||||| ||||||||||||
Sbjct: 7  gaggtagtaggttgtatagttttaggg 33




>33899_ssc-let-7a-2:mirbase
          Length = 92

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||||||| ||||||||||||
Sbjct: 12 gaggtagtaggttgtatagttttaggg 38




>34165_dre-let-7a-1:mirbase
          Length = 89

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||||||| ||||||||||||
Sbjct: 12 gaggtagtaggttgtatagttttaggg 38




>34526_fru-let-7a-2:mirbase
          Length = 76

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||||||| ||||||||||||
Sbjct: 5  gaggtagtaggttgtatagttttaggg 31




>34674_tni-let-7a-2:mirbase
          Length = 84

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||||||| ||||||||||||
Sbjct: 13 gaggtagtaggttgtatagttttaggg 39




>28342_hsa-let-7b:mirbase
          Length = 83

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 59/72 (81%)
 Strand = Plus / Plus

                                                                      
Query: 9  gaggtagtaggttgcatagttttagggcagggattttgcccacaaggagataactatacg 68
          ||||||||||||||  | |||| ||||||| ||| ||||||    | |||||||||||| 
Sbjct: 7  gaggtagtaggttgtgtggtttcagggcagtgatgttgcccctcggaagataactataca 66

                      
Query: 69 acctgctgcctt 80
          |||| |||||||
Sbjct: 67 acctactgcctt 78




>31754_mmu-let-7b:mirbase
          Length = 85

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 59/72 (81%)
 Strand = Plus / Plus

                                                                      
Query: 9  gaggtagtaggttgcatagttttagggcagggattttgcccacaaggagataactatacg 68
          ||||||||||||||  | |||| ||||||| ||| ||||||    | |||||||||||| 
Sbjct: 8  gaggtagtaggttgtgtggtttcagggcagtgatgttgcccctccgaagataactataca 67

                      
Query: 69 acctgctgcctt 80
          |||| |||||||
Sbjct: 68 acctactgcctt 79




>25408_pma-let-7a-1:mirbase
          Length = 108

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||||||| ||||||| ||||
Sbjct: 17 gaggtagtaggttgtatagtttaaggg 43




>25409_pma-let-7a-2:mirbase
          Length = 103

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||||||| ||||||| ||||
Sbjct: 18 gaggtagtaggttgtatagtttcaggg 44




>27321_mdo-let-7b:mirbase
          Length = 88

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 61/74 (82%), Gaps = 2/74 (2%)
 Strand = Plus / Plus

                                                                      
Query: 9  gaggtagtaggttgcatagttttagggcagggattttgccc--acaaggagataactata 66
          ||||||||||||||  | |||| |||| || ||||||||||  |  || |||||||||||
Sbjct: 9  gaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcagaagataactata 68

                        
Query: 67 cgacctgctgcctt 80
          | |||| |||||||
Sbjct: 69 caacctactgcctt 82




>27324_mdo-let-7f-2:mirbase
          Length = 80

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||| ||| ||||||||||||
Sbjct: 6  gaggtagtagattgtatagttttaggg 32




>27637_mml-let-7f-2:mirbase
          Length = 83

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||| ||| ||||||||||||
Sbjct: 9  gaggtagtagattgtatagttttaggg 35




>28347_hsa-let-7f-2:mirbase
          Length = 83

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||| ||| ||||||||||||
Sbjct: 9  gaggtagtagattgtatagttttaggg 35




>30134_ptr-let-7f-2:mirbase
          Length = 82

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||| ||| ||||||||||||
Sbjct: 9  gaggtagtagattgtatagttttaggg 35




>30739_ppy-let-7f-2:mirbase
          Length = 83

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||| ||| ||||||||||||
Sbjct: 9  gaggtagtagattgtatagttttaggg 35




>31414_oan-let-7f-2:mirbase
          Length = 130

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||| ||| ||||||||||||
Sbjct: 32 gaggtagtagattgtatagttttaggg 58




>31760_mmu-let-7f-2:mirbase
          Length = 83

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||| ||| ||||||||||||
Sbjct: 9  gaggtagtagattgtatagttttaggg 35




>32646_rno-let-7f-2:mirbase
          Length = 83

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||| ||| ||||||||||||
Sbjct: 9  gaggtagtagattgtatagttttaggg 35




>33116_bta-let-7f-2:mirbase
          Length = 83

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||| ||| ||||||||||||
Sbjct: 9  gaggtagtagattgtatagttttaggg 35




>33902_ssc-let-7f:mirbase
          Length = 83

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||| ||| ||||||||||||
Sbjct: 9  gaggtagtagattgtatagttttaggg 35




>34167_dre-let-7a-3:mirbase
          Length = 107

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 9  gaggtagtaggttgcatagttttaggg 35
          |||||||||||||| ||||||| ||||
Sbjct: 19 gaggtagtaggttgtatagtttgaggg 45