miRNEST 2.0, an integrative microRNA resource :: BLAST
>27634_mml-let-7d:mirbase
Length = 87
Score = 165 bits (83), Expect = 6e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60
Query: 61 actatacgacctgctgcctttcttagg 87
|||||||||||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87
>28344_hsa-let-7d:mirbase
Length = 87
Score = 165 bits (83), Expect = 6e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60
Query: 61 actatacgacctgctgcctttcttagg 87
|||||||||||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87
>30736_ppy-let-7d:mirbase
Length = 87
Score = 165 bits (83), Expect = 6e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60
Query: 61 actatacgacctgctgcctttcttagg 87
|||||||||||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87
>30131_ptr-let-7d:mirbase
Length = 86
Score = 163 bits (82), Expect = 3e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 2 ctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagataa 61
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 ctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggtaa 60
Query: 62 ctatacgacctgctgcctttcttagg 87
||||||||||||||||||||||||||
Sbjct: 61 ctatacgacctgctgcctttcttagg 86
>27322_mdo-let-7d:mirbase
Length = 106
Score = 157 bits (79), Expect = 2e-39
Identities = 85/87 (97%)
Strand = Plus / Plus
Query: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 9 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagtta 68
Query: 61 actatacgacctgctgcctttcttagg 87
||||||| |||||||||||||||||||
Sbjct: 69 actatacaacctgctgcctttcttagg 95
>31757_mmu-let-7d:mirbase
Length = 103
Score = 157 bits (79), Expect = 2e-39
Identities = 85/87 (97%)
Strand = Plus / Plus
Query: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 9 cctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaaggagtta 68
Query: 61 actatacgacctgctgcctttcttagg 87
|||||||||||||||||||||||||||
Sbjct: 69 actatacgacctgctgcctttcttagg 95
>32643_rno-let-7d:mirbase
Length = 98
Score = 157 bits (79), Expect = 2e-39
Identities = 85/87 (97%)
Strand = Plus / Plus
Query: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 7 cctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaaggagtta 66
Query: 61 actatacgacctgctgcctttcttagg 87
|||||||||||||||||||||||||||
Sbjct: 67 actatacgacctgctgcctttcttagg 93
>33099_rno-mir-3596b:mirbase
Length = 95
Score = 157 bits (79), Expect = 2e-39
Identities = 85/87 (97%)
Strand = Plus / Minus
Query: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 90 cctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaaggagtta 31
Query: 61 actatacgacctgctgcctttcttagg 87
|||||||||||||||||||||||||||
Sbjct: 30 actatacgacctgctgcctttcttagg 4
>33113_bta-let-7d:mirbase
Length = 87
Score = 157 bits (79), Expect = 2e-39
Identities = 85/87 (97%)
Strand = Plus / Plus
Query: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 1 cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 60
Query: 61 actatacgacctgctgcctttcttagg 87
|||||||||||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87
>25873_gga-let-7d:mirbase
Length = 103
Score = 141 bits (71), Expect = 9e-35
Identities = 83/87 (95%)
Strand = Plus / Plus
Query: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 9 cctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaaggaggta 68
Query: 61 actatacgacctgctgcctttcttagg 87
||||||| |||||||||||||||||||
Sbjct: 69 actatacaacctgctgcctttcttagg 95
>26382_tgu-let-7d:mirbase
Length = 92
Score = 141 bits (71), Expect = 9e-35
Identities = 83/87 (95%)
Strand = Plus / Plus
Query: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||
Sbjct: 4 cctaggaagaggtagtaggttgcatagttttagggcagggattttgctcagaaggaggta 63
Query: 61 actatacgacctgctgcctttcttagg 87
||||||| |||||||||||||||||||
Sbjct: 64 actatacaacctgctgcctttcttagg 90
>31411_oan-let-7d:mirbase
Length = 116
Score = 125 bits (63), Expect = 5e-30
Identities = 81/87 (93%)
Strand = Plus / Plus
Query: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
|||||||||||||||||||||||||||||||||||||| |||||||| || |||| | ||
Sbjct: 17 cctaggaagaggtagtaggttgcatagttttagggcagtgattttgctcataaggtgtta 76
Query: 61 actatacgacctgctgcctttcttagg 87
||||||| |||||||||||||||||||
Sbjct: 77 actatacaacctgctgcctttcttagg 103
>25871_gga-let-7b:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 66/79 (83%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 4 aggaagaggtagtaggttgcatagttttagggcagggattttgcccaca--aggagataa 61
|||| |||||||||||||| | |||| |||| || |||||||||| | |||||||||
Sbjct: 2 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 61
Query: 62 ctatacgacctgctgcctt 80
|||||| |||| |||||||
Sbjct: 62 ctatacaacctactgcctt 80
>26375_tgu-let-7a-1:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttagggc 36
|||||||||||||| |||||||||||||
Sbjct: 12 gaggtagtaggttgtatagttttagggc 39
>26379_tgu-let-7b:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 66/79 (83%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 4 aggaagaggtagtaggttgcatagttttagggcagggattttgcccaca--aggagataa 61
|||| |||||||||||||| | |||| |||| || |||||||||| | |||||||||
Sbjct: 7 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 66
Query: 62 ctatacgacctgctgcctt 80
|||||| |||| |||||||
Sbjct: 67 ctatacaacctactgcctt 85
>27632_mml-let-7b:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttagggcagggattttgcccacaaggagataactatacg 68
|||||||||||||| | |||| ||||||| ||| |||||| || ||||||||||||
Sbjct: 7 gaggtagtaggttgtgtggtttcagggcagtgatgttgcccctcagaagataactataca 66
Query: 69 acctgctgcctt 80
|||| |||||||
Sbjct: 67 acctactgcctt 78
>30129_ptr-let-7b:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttagggcagggattttgcccacaaggagataactatacg 68
|||||||||||||| | |||| ||||||| ||| |||||| || ||||||||||||
Sbjct: 6 gaggtagtaggttgtgtggtttcagggcagtgatgttgcccctcagaagataactataca 65
Query: 69 acctgctgcctt 80
|||| |||||||
Sbjct: 66 acctactgcctt 77
>30734_ppy-let-7b:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttagggcagggattttgcccacaaggagataactatacg 68
|||||||||||||| | |||| ||||||| ||| |||||| || ||||||||||||
Sbjct: 7 gaggtagtaggttgtgtggtttcagggcagtgatgttgcccctcagaagataactataca 66
Query: 69 acctgctgcctt 80
|||| |||||||
Sbjct: 67 acctactgcctt 78
>25868_gga-let-7a-1:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||||||| ||||||||||||
Sbjct: 14 gaggtagtaggttgtatagttttaggg 40
>25870_gga-let-7a-3:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||||||| ||||||||||||
Sbjct: 5 gaggtagtaggttgtatagttttaggg 31
>26377_tgu-let-7a-3:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||||||| ||||||||||||
Sbjct: 62 gaggtagtaggttgtatagttttaggg 88
>27318_mdo-let-7a-1:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||||||| ||||||||||||
Sbjct: 16 gaggtagtaggttgtatagttttaggg 42
>27629_mml-let-7a-1:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||||||| ||||||||||||
Sbjct: 7 gaggtagtaggttgtatagttttaggg 33
>28339_hsa-let-7a-1:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||||||| ||||||||||||
Sbjct: 7 gaggtagtaggttgtatagttttaggg 33
>30126_ptr-let-7a-1:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||||||| ||||||||||||
Sbjct: 6 gaggtagtaggttgtatagttttaggg 32
>30731_ppy-let-7a-1:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||||||| ||||||||||||
Sbjct: 7 gaggtagtaggttgtatagttttaggg 33
>31752_mmu-let-7a-1:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||||||| ||||||||||||
Sbjct: 14 gaggtagtaggttgtatagttttaggg 40
>32638_rno-let-7a-1:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||||||| ||||||||||||
Sbjct: 14 gaggtagtaggttgtatagttttaggg 40
>33108_bta-let-7a-1:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||||||| ||||||||||||
Sbjct: 7 gaggtagtaggttgtatagttttaggg 33
>33899_ssc-let-7a-2:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||||||| ||||||||||||
Sbjct: 12 gaggtagtaggttgtatagttttaggg 38
>34165_dre-let-7a-1:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||||||| ||||||||||||
Sbjct: 12 gaggtagtaggttgtatagttttaggg 38
>34526_fru-let-7a-2:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||||||| ||||||||||||
Sbjct: 5 gaggtagtaggttgtatagttttaggg 31
>34674_tni-let-7a-2:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||||||| ||||||||||||
Sbjct: 13 gaggtagtaggttgtatagttttaggg 39
>28342_hsa-let-7b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 59/72 (81%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttagggcagggattttgcccacaaggagataactatacg 68
|||||||||||||| | |||| ||||||| ||| |||||| | ||||||||||||
Sbjct: 7 gaggtagtaggttgtgtggtttcagggcagtgatgttgcccctcggaagataactataca 66
Query: 69 acctgctgcctt 80
|||| |||||||
Sbjct: 67 acctactgcctt 78
>31754_mmu-let-7b:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 59/72 (81%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttagggcagggattttgcccacaaggagataactatacg 68
|||||||||||||| | |||| ||||||| ||| |||||| | ||||||||||||
Sbjct: 8 gaggtagtaggttgtgtggtttcagggcagtgatgttgcccctccgaagataactataca 67
Query: 69 acctgctgcctt 80
|||| |||||||
Sbjct: 68 acctactgcctt 79
>25408_pma-let-7a-1:mirbase
Length = 108
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||||||| ||||||| ||||
Sbjct: 17 gaggtagtaggttgtatagtttaaggg 43
>25409_pma-let-7a-2:mirbase
Length = 103
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||||||| ||||||| ||||
Sbjct: 18 gaggtagtaggttgtatagtttcaggg 44
>27321_mdo-let-7b:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 61/74 (82%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttagggcagggattttgccc--acaaggagataactata 66
|||||||||||||| | |||| |||| || |||||||||| | || |||||||||||
Sbjct: 9 gaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcagaagataactata 68
Query: 67 cgacctgctgcctt 80
| |||| |||||||
Sbjct: 69 caacctactgcctt 82
>27324_mdo-let-7f-2:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||| ||| ||||||||||||
Sbjct: 6 gaggtagtagattgtatagttttaggg 32
>27637_mml-let-7f-2:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||| ||| ||||||||||||
Sbjct: 9 gaggtagtagattgtatagttttaggg 35
>28347_hsa-let-7f-2:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||| ||| ||||||||||||
Sbjct: 9 gaggtagtagattgtatagttttaggg 35
>30134_ptr-let-7f-2:mirbase
Length = 82
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||| ||| ||||||||||||
Sbjct: 9 gaggtagtagattgtatagttttaggg 35
>30739_ppy-let-7f-2:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||| ||| ||||||||||||
Sbjct: 9 gaggtagtagattgtatagttttaggg 35
>31414_oan-let-7f-2:mirbase
Length = 130
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||| ||| ||||||||||||
Sbjct: 32 gaggtagtagattgtatagttttaggg 58
>31760_mmu-let-7f-2:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||| ||| ||||||||||||
Sbjct: 9 gaggtagtagattgtatagttttaggg 35
>32646_rno-let-7f-2:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||| ||| ||||||||||||
Sbjct: 9 gaggtagtagattgtatagttttaggg 35
>33116_bta-let-7f-2:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||| ||| ||||||||||||
Sbjct: 9 gaggtagtagattgtatagttttaggg 35
>33902_ssc-let-7f:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||| ||| ||||||||||||
Sbjct: 9 gaggtagtagattgtatagttttaggg 35
>34167_dre-let-7a-3:mirbase
Length = 107
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 9 gaggtagtaggttgcatagttttaggg 35
|||||||||||||| ||||||| ||||
Sbjct: 19 gaggtagtaggttgtatagtttgaggg 45