miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41686_vvi-MIR479:mirbase
          Length = 94

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 105 gagccgaaccaatatcactcttgtatg 131
           |||||||||||||||||||||||||||
Sbjct: 64  gagccgaaccaatatcactcttgtatg 90




>41258_csi-MIR479:mirbase
          Length = 147

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 105 gagccgaaccaatatcactcttgtatgtttcttt 138
           |||||||| |||||||||||||||||| ||||||
Sbjct: 98  gagccgaatcaatatcactcttgtatgcttcttt 131



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 103 atgagccgaaccaatatcac 122
           ||||||||||||||||||||
Sbjct: 40  atgagccgaaccaatatcac 21




>41232_csi-MIR171b:mirbase
          Length = 165

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 105 gagccgaaccaatatcactcttgtatgtttcttt 138
           |||||||| |||||||||||||||||| ||||||
Sbjct: 123 gagccgaatcaatatcactcttgtatgcttcttt 156



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 103 atgagccgaaccaatatcac 122
           ||||||||||||||||||||
Sbjct: 65  atgagccgaaccaatatcac 46




>41392_ptc-MIR171l:mirbase
          Length = 112

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 105 gagccgaaccaatatcactcttgtatgtttctt 137
           |||||||| |||||||||||||||||| |||||
Sbjct: 79  gagccgaatcaatatcactcttgtatgcttctt 111




>42551_sbi-MIR171f:mirbase
          Length = 119

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 103 atgagccgaaccaatatcactcttgtat 130
           |||||||||||||||||||||| |||||
Sbjct: 80  atgagccgaaccaatatcactcatgtat 107




>42771_zma-MIR171k:mirbase
          Length = 104

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 104 tgagccgaaccaatatcactcttgtat 130
           ||||||||||||||||||||| |||||
Sbjct: 66  tgagccgaaccaatatcactcatgtat 92




>42550_sbi-MIR171e:mirbase
          Length = 124

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 104 tgagccgaaccaatatcactcttgtat 130
           ||||||||||||||||||||| |||||
Sbjct: 86  tgagccgaaccaatatcactcatgtat 112




>41988_osa-MIR171h:mirbase
          Length = 101

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 104 tgagccgaaccaatatcactcttgtat 130
           ||||||||||||||||||||| |||||
Sbjct: 55  tgagccgaaccaatatcactcatgtat 81




>40456_gma-MIR171b:mirbase
          Length = 92

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 35 tagacacggcgtggtattggtacggttcatc 65
          ||||||||||||| ||||||||||| |||||
Sbjct: 1  tagacacggcgtgatattggtacggctcatc 31



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 105 gagccgaaccaatatcactcttgt 128
           |||||||| |||||||||||||||
Sbjct: 63  gagccgaatcaatatcactcttgt 86




>40455_gma-MIR171b:mirbase
          Length = 92

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 35 tagacacggcgtggtattggtacggttcatc 65
          ||||||||||||| ||||||||||| |||||
Sbjct: 1  tagacacggcgtgatattggtacggctcatc 31



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 105 gagccgaaccaatatcactcttgt 128
           |||||||| |||||||||||||||
Sbjct: 63  gagccgaatcaatatcactcttgt 86




>42768_zma-MIR171h:mirbase
          Length = 124

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 104 tgagccgaaccaatatcactcttgta 129
           ||||||||||||||||||||| ||||
Sbjct: 86  tgagccgaaccaatatcactcatgta 111




>41394_ptc-MIR171n:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 105 gagccgaaccaatatcactcttgta 129
           |||||||| ||||||||||||||||
Sbjct: 71  gagccgaatcaatatcactcttgta 95




>41393_ptc-MIR171m:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 105 gagccgaaccaatatcactcttgta 129
           |||||||| ||||||||||||||||
Sbjct: 71  gagccgaatcaatatcactcttgta 95




>41064_ghr-MIR479:mirbase
          Length = 97

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 103 atgagccgaaccaatatcac 122
           ||||||||||||||||||||
Sbjct: 37  atgagccgaaccaatatcac 18