miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41096_tcc-MIR166c:mirbase
Length = 141
Score = 230 bits (116), Expect = 2e-61
Identities = 116/116 (100%)
Strand = Plus / Plus
Query: 1 gagggtgtatggaatgaagtttgatccaagatccctccttctccataagttcttatctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 gagggtgtatggaatgaagtttgatccaagatccctccttctccataagttcttatctga 72
Query: 61 taattacttaagggattgatcattgatctcggaccaggcttcattcctcacaccat 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 taattacttaagggattgatcattgatctcggaccaggcttcattcctcacaccat 128
>40673_mtr-MIR166f:mirbase
Length = 179
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 84 tgatctcggaccaggcttcattcctcacacc 114
|||||||||||||||||||||||||||||||
Sbjct: 149 tgatctcggaccaggcttcattcctcacacc 179
>41943_osa-MIR166g:mirbase
Length = 145
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 85 gatctcggaccaggcttcattcctcacacc 114
||||||||||||||||||||||||||||||
Sbjct: 111 gatctcggaccaggcttcattcctcacacc 140
>41748_bdi-MIR166f:mirbase
Length = 145
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 85 gatctcggaccaggcttcattcctcacacc 114
||||||||||||||||||||||||||||||
Sbjct: 90 gatctcggaccaggcttcattcctcacacc 119
>41583_vvi-MIR166a:mirbase
Length = 130
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 83 ttgatctcggaccaggcttcattcctcacacca 115
|||||||||||||||||||||||||| ||||||
Sbjct: 94 ttgatctcggaccaggcttcattcctgacacca 126
Score = 52.0 bits (26), Expect = 9e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 3 gggtgtatggaatgaagtttgatccaagatccctcctt 40
|||||| |||||||| |||||||||||||||| |||||
Sbjct: 3 gggtgtttggaatgaggtttgatccaagatccttcctt 40
>41336_ptc-MIR166o:mirbase
Length = 324
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 3 gggtgtatggaatgaagtttgatccaagatcc 34
|||||| |||||||||||||||||||||||||
Sbjct: 4 gggtgtttggaatgaagtttgatccaagatcc 35
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 84 tgatctcggaccaggcttcattcctcacacc 114
||||||||||||||||||||||||| |||||
Sbjct: 291 tgatctcggaccaggcttcattccttacacc 321
>41335_ptc-MIR166n:mirbase
Length = 331
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 3 gggtgtatggaatgaagtttgatccaagatcc 34
|||||| |||||||||||||||||||||||||
Sbjct: 4 gggtgtttggaatgaagtttgatccaagatcc 35
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 84 tgatctcggaccaggcttcattcctcacacc 114
||||||||||||||||||||||||| |||||
Sbjct: 298 tgatctcggaccaggcttcattccttacacc 328
>41945_osa-MIR166i:mirbase
Length = 145
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 85 gatctcggaccaggcttcattcctcacacca 115
||||||||| |||||||||||||||||||||
Sbjct: 111 gatctcggatcaggcttcattcctcacacca 141
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 ggtgtatggaatgaagtttgatccaagatc 33
||||| ||||||| ||||||||||||||||
Sbjct: 6 ggtgtttggaatgcagtttgatccaagatc 35
>41169_aqc-MIR166c:mirbase
Length = 116
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 85 gatctcggaccaggcttcattcctcacacca 115
|||||||||||||||||||||||| ||||||
Sbjct: 85 gatctcggaccaggcttcattccttacacca 115
>42728_zma-MIR166l:mirbase
Length = 137
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 85 gatctcggaccaggcttcattcctca 110
||||||||||||||||||||||||||
Sbjct: 94 gatctcggaccaggcttcattcctca 119
>41946_osa-MIR166j:mirbase
Length = 140
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 85 gatctcggaccaggcttcattcctcacacc 114
||||||||| ||||||||||||||||||||
Sbjct: 111 gatctcggatcaggcttcattcctcacacc 140
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 ggtgtatggaatgaagtttgatccaagatc 33
||||| ||||||| ||||||||||||||||
Sbjct: 6 ggtgtttggaatgcagtttgatccaagatc 35
>41747_bdi-MIR166e:mirbase
Length = 151
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 82 attgatctcggaccaggcttcattcc 107
||||||||||||||||||||||||||
Sbjct: 92 attgatctcggaccaggcttcattcc 117
>42719_zma-MIR166c:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 83 ttgatctcggaccaggcttcattcc 107
|||||||||||||||||||||||||
Sbjct: 66 ttgatctcggaccaggcttcattcc 90
>42511_sbi-MIR166d:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 83 ttgatctcggaccaggcttcattcc 107
|||||||||||||||||||||||||
Sbjct: 61 ttgatctcggaccaggcttcattcc 85
>41940_osa-MIR166d:mirbase
Length = 125
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 tgatctcggaccaggcttcattcc 107
||||||||||||||||||||||||
Sbjct: 86 tgatctcggaccaggcttcattcc 109
>41590_vvi-MIR166h:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 tgatctcggaccaggcttcattcc 107
||||||||||||||||||||||||
Sbjct: 64 tgatctcggaccaggcttcattcc 87
>41329_ptc-MIR166h:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 tgatctcggaccaggcttcattcc 107
||||||||||||||||||||||||
Sbjct: 67 tgatctcggaccaggcttcattcc 90
>41328_ptc-MIR166g:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 tgatctcggaccaggcttcattcc 107
||||||||||||||||||||||||
Sbjct: 69 tgatctcggaccaggcttcattcc 92
>41223_csi-MIR166b:mirbase
Length = 192
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 tgatctcggaccaggcttcattcc 107
||||||||||||||||||||||||
Sbjct: 146 tgatctcggaccaggcttcattcc 169
>41213_crt-MIR166a:mirbase
Length = 202
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 tgatctcggaccaggcttcattcc 107
||||||||||||||||||||||||
Sbjct: 156 tgatctcggaccaggcttcattcc 179
>41097_tcc-MIR166d:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 tgatctcggaccaggcttcattcc 107
||||||||||||||||||||||||
Sbjct: 74 tgatctcggaccaggcttcattcc 97
>41095_tcc-MIR166b:mirbase
Length = 178
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 tgatctcggaccaggcttcattcc 107
||||||||||||||||||||||||
Sbjct: 134 tgatctcggaccaggcttcattcc 157
>40675_mtr-MIR166h:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 tgatctcggaccaggcttcattcc 107
||||||||||||||||||||||||
Sbjct: 62 tgatctcggaccaggcttcattcc 85
>40668_mtr-MIR166:mirbase
Length = 121
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 tgatctcggaccaggcttcattcc 107
||||||||||||||||||||||||
Sbjct: 77 tgatctcggaccaggcttcattcc 100
>40350_rco-MIR166d:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 tgatctcggaccaggcttcattcc 107
||||||||||||||||||||||||
Sbjct: 62 tgatctcggaccaggcttcattcc 85
>42721_zma-MIR166e:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 gatctcggaccaggcttcattcc 107
|||||||||||||||||||||||
Sbjct: 63 gatctcggaccaggcttcattcc 85
>42720_zma-MIR166d:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 gatctcggaccaggcttcattcc 107
|||||||||||||||||||||||
Sbjct: 80 gatctcggaccaggcttcattcc 102
>42718_zma-MIR166b:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 gatctcggaccaggcttcattcc 107
|||||||||||||||||||||||
Sbjct: 92 gatctcggaccaggcttcattcc 114
>42717_zma-MIR166a:mirbase
Length = 213
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 gatctcggaccaggcttcattcc 107
|||||||||||||||||||||||
Sbjct: 185 gatctcggaccaggcttcattcc 207
>42518_sbi-MIR166k:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 tctcggaccaggcttcattcctc 109
|||||||||||||||||||||||
Sbjct: 81 tctcggaccaggcttcattcctc 103
>42515_sbi-MIR166h:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 gatctcggaccaggcttcattcc 107
|||||||||||||||||||||||
Sbjct: 158 gatctcggaccaggcttcattcc 180
>42508_sbi-MIR166a:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 gatctcggaccaggcttcattcc 107
|||||||||||||||||||||||
Sbjct: 84 gatctcggaccaggcttcattcc 106
>41938_osa-MIR166b:mirbase
Length = 206
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 gatctcggaccaggcttcattcc 107
|||||||||||||||||||||||
Sbjct: 164 gatctcggaccaggcttcattcc 186
>41937_osa-MIR166a:mirbase
Length = 145
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 gatctcggaccaggcttcattcc 107
|||||||||||||||||||||||
Sbjct: 106 gatctcggaccaggcttcattcc 128
>41745_bdi-MIR166c:mirbase
Length = 172
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 gatctcggaccaggcttcattcc 107
|||||||||||||||||||||||
Sbjct: 117 gatctcggaccaggcttcattcc 139
>41744_bdi-MIR166b:mirbase
Length = 244
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 gatctcggaccaggcttcattcc 107
|||||||||||||||||||||||
Sbjct: 188 gatctcggaccaggcttcattcc 210
>40670_mtr-MIR166c:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 tctcggaccaggcttcattcctc 109
|||||||||||||||||||||||
Sbjct: 78 tctcggaccaggcttcattcctc 100
>40669_mtr-MIR166b:mirbase
Length = 170
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 86 atctcggaccaggcttcattcct 108
|||||||||||||||||||||||
Sbjct: 142 atctcggaccaggcttcattcct 164
>39377_pab-MIR166b:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 86 atctcggaccaggcttcattcct 108
|||||||||||||||||||||||
Sbjct: 68 atctcggaccaggcttcattcct 90
>41338_ptc-MIR166q:mirbase
Length = 151
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 tctcggaccaggcttcattcct 108
||||||||||||||||||||||
Sbjct: 121 tctcggaccaggcttcattcct 142
>41167_aqc-MIR166a:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 ctcggaccaggcttcattcctc 109
||||||||||||||||||||||
Sbjct: 85 ctcggaccaggcttcattcctc 106
>39822_aly-MIR166b:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 atctcggaccaggcttcattcc 107
||||||||||||||||||||||
Sbjct: 107 atctcggaccaggcttcattcc 128
>42729_zma-MIR166m:mirbase
Length = 156
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 tcggaccaggcttcattcctc 109
|||||||||||||||||||||
Sbjct: 117 tcggaccaggcttcattcctc 137
>42725_zma-MIR166i:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctcggaccaggcttcattcc 107
|||||||||||||||||||||
Sbjct: 61 tctcggaccaggcttcattcc 81
>42516_sbi-MIR166i:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctcggaccaggcttcattcc 107
|||||||||||||||||||||
Sbjct: 64 tctcggaccaggcttcattcc 84
>42513_sbi-MIR166f:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 tcggaccaggcttcattcctc 109
|||||||||||||||||||||
Sbjct: 100 tcggaccaggcttcattcctc 120
>42512_sbi-MIR166e:mirbase
Length = 151
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 75 attgatcattgatctcggaccaggcttca 103
|||||| || |||||||||||||||||||
Sbjct: 98 attgatgatcgatctcggaccaggcttca 126
>41944_osa-MIR166h:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 tcggaccaggcttcattcctc 109
|||||||||||||||||||||
Sbjct: 89 tcggaccaggcttcattcctc 109
>41942_osa-MIR166f:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctcggaccaggcttcattcc 107
|||||||||||||||||||||
Sbjct: 70 tctcggaccaggcttcattcc 90
>41584_vvi-MIR166b:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 tcggaccaggcttcattcctc 109
|||||||||||||||||||||
Sbjct: 68 tcggaccaggcttcattcctc 88
>41334_ptc-MIR166m:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctcggaccaggcttcattcc 107
|||||||||||||||||||||
Sbjct: 74 tctcggaccaggcttcattcc 94
>41170_aqc-MIR166d:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 tcggaccaggcttcattcctc 109
|||||||||||||||||||||
Sbjct: 105 tcggaccaggcttcattcctc 125
>41025_pvu-MIR166a:mirbase
Length = 670
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctcggaccaggcttcattcc 107
|||||||||||||||||||||
Sbjct: 226 tctcggaccaggcttcattcc 246
>40674_mtr-MIR166g:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctcggaccaggcttcattcc 107
|||||||||||||||||||||
Sbjct: 80 tctcggaccaggcttcattcc 100
>40440_gma-MIR166b:mirbase
Length = 167
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctcggaccaggcttcattcc 107
|||||||||||||||||||||
Sbjct: 126 tctcggaccaggcttcattcc 146
>40267_bna-MIR166d:mirbase
Length = 128
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctcggaccaggcttcattcc 107
|||||||||||||||||||||
Sbjct: 75 tctcggaccaggcttcattcc 95
>40038_ath-MIR166g:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctcggaccaggcttcattcc 107
|||||||||||||||||||||
Sbjct: 83 tctcggaccaggcttcattcc 103
>40035_ath-MIR166d:mirbase
Length = 113
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctcggaccaggcttcattcc 107
|||||||||||||||||||||
Sbjct: 85 tctcggaccaggcttcattcc 105
>40034_ath-MIR166c:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctcggaccaggcttcattcc 107
|||||||||||||||||||||
Sbjct: 101 tctcggaccaggcttcattcc 121
>39827_aly-MIR166g:mirbase
Length = 131
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctcggaccaggcttcattcc 107
|||||||||||||||||||||
Sbjct: 87 tctcggaccaggcttcattcc 107
>39824_aly-MIR166d:mirbase
Length = 113
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctcggaccaggcttcattcc 107
|||||||||||||||||||||
Sbjct: 85 tctcggaccaggcttcattcc 105
>39823_aly-MIR166c:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctcggaccaggcttcattcc 107
|||||||||||||||||||||
Sbjct: 93 tctcggaccaggcttcattcc 113
>39734_smo-MIR166b:mirbase
Length = 136
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctcggaccaggcttcattcc 107
|||||||||||||||||||||
Sbjct: 97 tctcggaccaggcttcattcc 117
>39733_smo-MIR166a:mirbase
Length = 145
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctcggaccaggcttcattcc 107
|||||||||||||||||||||
Sbjct: 106 tctcggaccaggcttcattcc 126
>39376_pab-MIR166a:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 tcggaccaggcttcattcctc 109
|||||||||||||||||||||
Sbjct: 55 tcggaccaggcttcattcctc 75
