miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41897_hvu-MIR1436:mirbase
          Length = 91

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 50/56 (89%), Gaps = 3/56 (5%)
 Strand = Plus / Minus

                                                                  
Query: 12 aatgtactccctccgtcccataatg---tagtgtcaaaaaacgtcttacattatgg 64
          |||||||||||||||||||||||||   |||||||||||| |||  ||||||||||
Sbjct: 90 aatgtactccctccgtcccataatgtagtagtgtcaaaaaccgtactacattatgg 35



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 55 tacattatgggacggagggagta 77
          |||||||||||||||||||||||
Sbjct: 64 tacattatgggacggagggagta 86




>42663_tae-MIR1130:mirbase
          Length = 122

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                             
Query: 45 aaaaacgtcttacattatgggacggagggagtata 79
          ||||||||||||||||| | |||||||||||||||
Sbjct: 43 aaaaacgtcttacattacgagacggagggagtata 9



 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 45  aaaaacgtcttacattatgggacggag 71
           |||||||||||||||||||||||||||
Sbjct: 79  aaaaacgtcttacattatgggacggag 105




>42653_tae-MIR1120:mirbase
          Length = 119

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 35  tgtagtgtcaaaaaacgtcttacattatgggacggagggagtat 78
           ||||||||||||||   ||||| |||||| ||||||||||||||
Sbjct: 57  tgtagtgtcaaaaacattcttatattatgagacggagggagtat 100



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 52 tcttacattatgggacggagggagta 77
          ||||| ||||||||||||||||||||
Sbjct: 43 tcttatattatgggacggagggagta 18



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 15 gtactccctccgtcccataat 35
          |||||||||||||||||||||
Sbjct: 17 gtactccctccgtcccataat 37




>42219_osa-MIR1436:mirbase
          Length = 161

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 16  tactccctccgtcccataatgt 37
           ||||||||||||||||||||||
Sbjct: 142 tactccctccgtcccataatgt 121



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 56  acattatgggacggagggagta 77
           ||||||||||||||||||||||
Sbjct: 121 acattatgggacggagggagta 142



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 58 attatgggacggagggagta 77
          ||||||||||||||||||||
Sbjct: 31 attatgggacggagggagta 12



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 16 tactccctccgtcccataat 35
          ||||||||||||||||||||
Sbjct: 12 tactccctccgtcccataat 31




>42167_osa-MIR818d:mirbase
          Length = 139

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 53  cttacattatgggacggagggagta 77
           |||| ||||||||||||||||||||
Sbjct: 103 cttatattatgggacggagggagta 127



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 15  gtactccctccgtcccataat 35
           |||||||||||||||||||||
Sbjct: 128 gtactccctccgtcccataat 108