miRNEST 2.0, an integrative microRNA resource :: BLAST
>41596_vvi-MIR168:mirbase
Length = 132
Score = 254 bits (128), Expect = 2e-68
Identities = 131/132 (99%)
Strand = Plus / Plus
Query: 14 ggtctctaattcgcttggtgcaggtcgggaaccgacttcgccgctccggcagcgccggag 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaaccgacttcgccgctccggcagcgccggag 60
Query: 74 gcacgcggcggcctacgatgggttgctgagcgaattccgatcccgccttgcatcaactga 133
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcacgcggcggcctacgattggttgctgagcgaattccgatcccgccttgcatcaactga 120
Query: 134 atcggagacggc 145
||||||||||||
Sbjct: 121 atcggagacggc 132
>41101_tcc-MIR168:mirbase
Length = 167
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcggagacggcggtga 150
||||||||||||||||||||||||||||||| |||||||
Sbjct: 124 gatcccgccttgcatcaactgaatcggagaccgcggtga 162
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 14 ggtctctaattcgcttggtgcaggtcgggaac 45
||||||||||||||||||||||||||||||||
Sbjct: 11 ggtctctaattcgcttggtgcaggtcgggaac 42
>40448_gma-MIR168:mirbase
Length = 125
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 14 ggtctctaattcgcttggtgcaggtcgggaaccg 47
||||||||||||||||||||||||||||||||||
Sbjct: 9 ggtctctaattcgcttggtgcaggtcgggaaccg 42
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcggagacggcggtga 150
||||||||||||||||||||||||||||| | |||||||
Sbjct: 85 gatcccgccttgcatcaactgaatcggaggccgcggtga 123
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 14 ggtctctaattcgcttggtgcaggtcgggaac 45
||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcggaga 141
||||||||||||||||||||||||||||||
Sbjct: 107 gatcccgccttgcatcaactgaatcggaga 136
>41215_crt-MIR168:mirbase
Length = 201
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 14 ggtctctaattcgcttggtgcaggtcgggaac 45
||||||||||||||||||||||||||||||||
Sbjct: 11 ggtctctaattcgcttggtgcaggtcgggaac 42
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcggagac 142
|||||||||||||||||||||||||||||||
Sbjct: 140 gatcccgccttgcatcaactgaatcggagac 170
>41210_ccl-MIR168:mirbase
Length = 176
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 14 ggtctctaattcgcttggtgcaggtcgggaac 45
||||||||||||||||||||||||||||||||
Sbjct: 10 ggtctctaattcgcttggtgcaggtcgggaac 41
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcggagac 142
|||||||||||||||||||||||||||||||
Sbjct: 139 gatcccgccttgcatcaactgaatcggagac 169
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcggag 140
|||||||||||||||||||||||||||||
Sbjct: 131 gatcccgccttgcatcaactgaatcggag 159
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 14 ggtctctaattcgcttggtgcaggtcgggaac 45
||||||| ||||||||||||||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaac 32
>40043_ath-MIR168a:mirbase
Length = 138
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcgga 139
||||||||||||||||||||||||||||
Sbjct: 100 gatcccgccttgcatcaactgaatcgga 127
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 22 attcgcttggtgcaggtcgggaacc 46
|||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaacc 40
>39832_aly-MIR168a:mirbase
Length = 155
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcgga 139
||||||||||||||||||||||||||||
Sbjct: 106 gatcccgccttgcatcaactgaatcgga 133
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 22 attcgcttggtgcaggtcgggaacc 46
|||||||||||||||||||||||||
Sbjct: 22 attcgcttggtgcaggtcgggaacc 46
>42742_zma-MIR168b:mirbase
Length = 104
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcggagacggcg 146
|||||||||||||||||| |||||||||| |||||
Sbjct: 64 gatcccgccttgcatcaagtgaatcggagccggcg 98
>40355_rco-MIR168:mirbase
Length = 131
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 19 ctaattcgcttggtgcaggtcgggaac 45
|||||||||||||||||||||||||||
Sbjct: 1 ctaattcgcttggtgcaggtcgggaac 27
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcg 137
||||||||||||||||||||||||||
Sbjct: 103 gatcccgccttgcatcaactgaatcg 128
>42741_zma-MIR168a:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcggagacggcgg 147
|||||||||||||| ||| |||||||||| ||||||
Sbjct: 64 gatcccgccttgcaccaagtgaatcggagccggcgg 99
>40044_ath-MIR168b:mirbase
Length = 124
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 22 attcgcttggtgcaggtcgggaac 45
||||||||||||||||||||||||
Sbjct: 17 attcgcttggtgcaggtcgggaac 40
>39833_aly-MIR168b:mirbase
Length = 176
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 22 attcgcttggtgcaggtcgggaac 45
||||||||||||||||||||||||
Sbjct: 41 attcgcttggtgcaggtcgggaac 64
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcggag 140
||||||| |||| ||||||||||||||||
Sbjct: 110 gatcccgtcttgtatcaactgaatcggag 138
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcggagacggcg 146
|||||||||||||| ||| |||||||||| |||||
Sbjct: 61 gatcccgccttgcaccaagtgaatcggagccggcg 95
>42460_sof-MIR168b:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcggagacggcg 146
|||||||||||||| ||| |||||||||| |||||
Sbjct: 63 gatcccgccttgcaccaagtgaatcggagccggcg 97
>42459_sof-MIR168a:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcggagacggcg 146
|||||||||||||| ||| |||||||||| |||||
Sbjct: 64 gatcccgccttgcaccaagtgaatcggagccggcg 98
>41888_hvu-MIR168:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcggagacggcg 146
|||||||||||||| ||| |||||||||| |||||
Sbjct: 67 gatcccgccttgcaccaagtgaatcggagccggcg 101
>41887_hvu-MIR168:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcggagacggcg 146
|||||||||||||| ||| |||||||||| |||||
Sbjct: 67 gatcccgccttgcaccaagtgaatcggagccggcg 101
>41753_bdi-MIR168:mirbase
Length = 136
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcggagacggcg 146
|||||||||||||| ||| |||||||||| |||||
Sbjct: 76 gatcccgccttgcaccaagtgaatcggagccggcg 110
>40271_bna-MIR168:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 8e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 7 ttacggtggtctctaattcgcttggtgcaggtcgggaac 45
|||||| || |||| | ||||||||||||||||||||||
Sbjct: 1 ttacggcggcctctgactcgcttggtgcaggtcgggaac 39
>41962_osa-MIR168a:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcggag 140
|||||||||||||| ||| ||||||||||
Sbjct: 56 gatcccgccttgcaccaagtgaatcggag 84
>41961_osa-MIR168a:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcggag 140
|||||||||||||| ||| ||||||||||
Sbjct: 56 gatcccgccttgcaccaagtgaatcggag 84
