miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>27551_lla-mir-26a:mirbase
Length = 77
Score = 145 bits (73), Expect = 5e-36
Identities = 76/77 (98%)
Strand = Plus / Plus
Query: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttgat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttggt 60
Query: 61 tacttgcacggggacgc 77
|||||||||||||||||
Sbjct: 61 tacttgcacggggacgc 77
>27670_mml-mir-26a-1:mirbase
Length = 77
Score = 145 bits (73), Expect = 5e-36
Identities = 76/77 (98%)
Strand = Plus / Plus
Query: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttgat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttggt 60
Query: 61 tacttgcacggggacgc 77
|||||||||||||||||
Sbjct: 61 tacttgcacggggacgc 77
>28272_ggo-mir-26a:mirbase
Length = 77
Score = 145 bits (73), Expect = 5e-36
Identities = 76/77 (98%)
Strand = Plus / Plus
Query: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttgat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttggt 60
Query: 61 tacttgcacggggacgc 77
|||||||||||||||||
Sbjct: 61 tacttgcacggggacgc 77
>28380_hsa-mir-26a-1:mirbase
Length = 77
Score = 145 bits (73), Expect = 5e-36
Identities = 76/77 (98%)
Strand = Plus / Plus
Query: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttgat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttggt 60
Query: 61 tacttgcacggggacgc 77
|||||||||||||||||
Sbjct: 61 tacttgcacggggacgc 77
>30059_ppa-mir-26a:mirbase
Length = 77
Score = 145 bits (73), Expect = 5e-36
Identities = 76/77 (98%)
Strand = Plus / Plus
Query: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttgat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttggt 60
Query: 61 tacttgcacggggacgc 77
|||||||||||||||||
Sbjct: 61 tacttgcacggggacgc 77
>30166_ptr-mir-26a-1:mirbase
Length = 77
Score = 145 bits (73), Expect = 5e-36
Identities = 76/77 (98%)
Strand = Plus / Plus
Query: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttgat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttggt 60
Query: 61 tacttgcacggggacgc 77
|||||||||||||||||
Sbjct: 61 tacttgcacggggacgc 77
>30771_ppy-mir-26a:mirbase
Length = 77
Score = 145 bits (73), Expect = 5e-36
Identities = 76/77 (98%)
Strand = Plus / Plus
Query: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttgat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttggt 60
Query: 61 tacttgcacggggacgc 77
|||||||||||||||||
Sbjct: 61 tacttgcacggggacgc 77
>26965_eca-mir-26a-2:mirbase
Length = 77
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttgat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttggt 60
Query: 61 tacttgcacggggacgc 77
|||||||||| ||||||
Sbjct: 61 tacttgcacgcggacgc 77
>31794_mmu-mir-26a-1:mirbase
Length = 90
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttgat 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 7 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaaggggcctattcttggt 66
Query: 61 tacttgcacggggacgc 77
|||||||||||||||||
Sbjct: 67 tacttgcacggggacgc 83
>32678_rno-mir-26a:mirbase
Length = 90
Score = 129 bits (65), Expect = 3e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttgat 60
||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 7 gtggccttgttcaagtaatccaggataggctgtgcaggtcccaaggggcctattcttggt 66
Query: 61 tacttgcacggggacgc 77
|||||||||||||||||
Sbjct: 67 tacttgcacggggacgc 83
>33150_bta-mir-26a-1:mirbase
Length = 90
Score = 121 bits (61), Expect = 7e-29
Identities = 73/77 (94%)
Strand = Plus / Plus
Query: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttgat 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |
Sbjct: 7 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaaggggcctattctcggt 66
Query: 61 tacttgcacggggacgc 77
|||||||||| ||||||
Sbjct: 67 tacttgcacgcggacgc 83
>33153_bta-mir-26c:mirbase
Length = 90
Score = 121 bits (61), Expect = 7e-29
Identities = 73/77 (94%)
Strand = Plus / Minus
Query: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttgat 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |
Sbjct: 84 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaaggggcctattctcggt 25
Query: 61 tacttgcacggggacgc 77
|||||||||| ||||||
Sbjct: 24 tacttgcacgcggacgc 8
>26642_cfa-mir-26a-1:mirbase
Length = 61
Score = 113 bits (57), Expect = 2e-26
Identities = 60/61 (98%)
Strand = Plus / Plus
Query: 10 ttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttgattacttgcac 69
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 ttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttggttacttgcac 60
Query: 70 g 70
|
Sbjct: 61 g 61
>26414_tgu-mir-26-1:mirbase
Length = 72
Score = 58.0 bits (29), Expect = 9e-10
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 gtggcctcgttcaagtaatccaggataggctgt 33
||||||| |||||||||||||||||||||||||
Sbjct: 2 gtggcctggttcaagtaatccaggataggctgt 34
>26415_tgu-mir-26-2:mirbase
Length = 72
Score = 58.0 bits (29), Expect = 9e-10
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 gtggcctcgttcaagtaatccaggataggctgt 33
||||||| |||||||||||||||||||||||||
Sbjct: 2 gtggcctggttcaagtaatccaggataggctgt 34
>25447_pma-mir-26a-2:mirbase
Length = 91
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 gttcaagtaatccaggataggctgtg 34
||||||||||||||||||||||||||
Sbjct: 18 gttcaagtaatccaggataggctgtg 43
>25721_xtr-mir-26-1:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 4 gcctcgttcaagtaatccaggataggctgt 33
|||| |||||||||||||||||||||||||
Sbjct: 8 gcctggttcaagtaatccaggataggctgt 37
>34233_dre-mir-26a-1:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 2 tggcctcgttcaagtaatccaggataggct 31
|||||| |||||||||||||||||||||||
Sbjct: 3 tggcctggttcaagtaatccaggataggct 32
>34565_fru-mir-26:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 ggcctcgttcaagtaatccaggataggctg 32
||||| ||||||||||||||||||||||||
Sbjct: 8 ggcctggttcaagtaatccaggataggctg 37
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 ggcctattcttgattacttg 66
||||||||||||||||||||
Sbjct: 51 ggcctattcttgattacttg 70
>34712_tni-mir-26:mirbase
Length = 96
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 ggcctcgttcaagtaatccaggataggctg 32
||||| ||||||||||||||||||||||||
Sbjct: 13 ggcctggttcaagtaatccaggataggctg 42
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 ggcctattcttgattacttg 66
||||||||||||||||||||
Sbjct: 56 ggcctattcttgattacttg 75
>25446_pma-mir-26a-1:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 4 gcctcgttcaagtaatccaggataggctg 32
|||| ||||||||||||||||||||||||
Sbjct: 8 gcctggttcaagtaatccaggataggctg 36
>25909_gga-mir-26a:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 gttcaagtaatccaggataggctgt 33
|||||||||||||||||||||||||
Sbjct: 9 gttcaagtaatccaggataggctgt 33
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 47 ggcctattcttgattacttgcacgggga 74
|||||||||||| |||||||||| ||||
Sbjct: 47 ggcctattcttggttacttgcactggga 74
>27348_mdo-mir-26-1:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 ttcaagtaatccaggataggctgtg 34
|||||||||||||||||||||||||
Sbjct: 1 ttcaagtaatccaggataggctgtg 25
>31443_oan-mir-26:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 gttcaagtaatccaggataggctgt 33
|||||||||||||||||||||||||
Sbjct: 13 gttcaagtaatccaggataggctgt 37
>31795_mmu-mir-26a-2:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 ttcaagtaatccaggataggctgtg 34
|||||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgtg 38
>34234_dre-mir-26a-2:mirbase
Length = 128
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 gttcaagtaatccaggataggctgt 33
|||||||||||||||||||||||||
Sbjct: 36 gttcaagtaatccaggataggctgt 60
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 47 ggcctattcttgattacttgcac 69
||||||||| |||||||||||||
Sbjct: 71 ggcctattcatgattacttgcac 93
>25722_xtr-mir-26-2:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 ttcaagtaatccaggataggctgt 33
||||||||||||||||||||||||
Sbjct: 12 ttcaagtaatccaggataggctgt 35
>26643_cfa-mir-26a-2:mirbase
Length = 60
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 ttcaagtaatccaggataggctgt 33
||||||||||||||||||||||||
Sbjct: 1 ttcaagtaatccaggataggctgt 24
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 ggcctattcttgattacttg 66
||||||||||||||||||||
Sbjct: 37 ggcctattcttgattacttg 56
>26964_eca-mir-26a:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 ttcaagtaatccaggataggctgt 33
||||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgt 37
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 ggcctattcttgattacttg 66
||||||||||||||||||||
Sbjct: 50 ggcctattcttgattacttg 69
>27349_mdo-mir-26-2:mirbase
Length = 68
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 ttcaagtaatccaggataggctgt 33
||||||||||||||||||||||||
Sbjct: 5 ttcaagtaatccaggataggctgt 28
>27350_mdo-mir-26-3:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 gttcaagtaatccaggataggctg 32
||||||||||||||||||||||||
Sbjct: 6 gttcaagtaatccaggataggctg 29
>27671_mml-mir-26a-2:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 ttcaagtaatccaggataggctgt 33
||||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgt 37
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 ggcctattcttgattacttg 66
||||||||||||||||||||
Sbjct: 50 ggcctattcttgattacttg 69
>28381_hsa-mir-26a-2:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 ttcaagtaatccaggataggctgt 33
||||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgt 37
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 ggcctattcttgattacttg 66
||||||||||||||||||||
Sbjct: 50 ggcctattcttgattacttg 69
>30167_ptr-mir-26a-2:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 ttcaagtaatccaggataggctgt 33
||||||||||||||||||||||||
Sbjct: 13 ttcaagtaatccaggataggctgt 36
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 ggcctattcttgattacttg 66
||||||||||||||||||||
Sbjct: 49 ggcctattcttgattacttg 68
>30772_ppy-mir-26a-2:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 ttcaagtaatccaggataggctgt 33
||||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgt 37
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 ggcctattcttgattacttg 66
||||||||||||||||||||
Sbjct: 50 ggcctattcttgattacttg 69
>33151_bta-mir-26a-2:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 ttcaagtaatccaggataggctgt 33
||||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgt 37
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 ggcctattcttgattacttg 66
||||||||||||||||||||
Sbjct: 50 ggcctattcttgattacttg 69
>33930_ssc-mir-26a:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 ttcaagtaatccaggataggctgt 33
||||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgt 37
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 ggcctattcttgattacttg 66
||||||||||||||||||||
Sbjct: 50 ggcctattcttgattacttg 69
>34235_dre-mir-26a-3:mirbase
Length = 137
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 gttcaagtaatccaggataggct 31
|||||||||||||||||||||||
Sbjct: 38 gttcaagtaatccaggataggct 60
>34236_dre-mir-26b:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 4 gcctcgttcaagtaatccaggatagg 29
|||| |||||||||||||||||||||
Sbjct: 14 gcctggttcaagtaatccaggatagg 39
>25448_pma-mir-26b:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 gtggcctcgttcaagtaatccaggatagg 29
||||||| ||||||||||||||||||||
Sbjct: 7 gtggcctgattcaagtaatccaggatagg 35
