miRNEST 2.0, an integrative microRNA resource :: BLAST
>27673_mml-mir-27a:mirbase
Length = 78
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtgg 60
Query: 61 ctaagttccg 70
||||||||||
Sbjct: 61 ctaagttccg 70
>28273_ggo-mir-27a:mirbase
Length = 78
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtgg 60
Query: 61 ctaagttccg 70
||||||||||
Sbjct: 61 ctaagttccg 70
>28383_hsa-mir-27a:mirbase
Length = 78
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtgg 60
Query: 61 ctaagttccg 70
||||||||||
Sbjct: 61 ctaagttccg 70
>30060_ppa-mir-27a:mirbase
Length = 78
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtgg 60
Query: 61 ctaagttccg 70
||||||||||
Sbjct: 61 ctaagttccg 70
>30169_ptr-mir-27a:mirbase
Length = 78
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtgg 60
Query: 61 ctaagttccg 70
||||||||||
Sbjct: 61 ctaagttccg 70
>30774_ppy-mir-27a:mirbase
Length = 78
Score = 131 bits (66), Expect = 8e-32
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtgg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagttgtgttcacagtgg 60
Query: 61 ctaagttccg 70
||||||||||
Sbjct: 61 ctaagttccg 70
>31404_lca-mir-27a:mirbase
Length = 78
Score = 123 bits (62), Expect = 2e-29
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtgg 60
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaaatcatgttcacagtgg 60
Query: 61 ctaagttccg 70
||||||||||
Sbjct: 61 ctaagttccg 70
>26966_eca-mir-27a:mirbase
Length = 77
Score = 115 bits (58), Expect = 5e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtggctaa 64
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 5 ggagcagggcttagctgcttgtgagcagggtccacaccgagtcatgttcacagtggctaa 64
Query: 65 gttccg 70
||||||
Sbjct: 65 gttccg 70
>27491_age-mir-27a:mirbase
Length = 78
Score = 115 bits (58), Expect = 5e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtgg 60
||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 1 ctgaggagcagggcttagctgcttgtgagcagggttcactccaagtcatgttcacagtgg 60
Query: 61 ctaagttccg 70
||||||||||
Sbjct: 61 ctaagttccg 70
>27599_sla-mir-27a:mirbase
Length = 78
Score = 115 bits (58), Expect = 5e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtgg 60
||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 1 ctgaggagcagggcttagctgcttgtgagcagggttcactccaagtcatgttcacagtgg 60
Query: 61 ctaagttccg 70
||||||||||
Sbjct: 61 ctaagttccg 70
>26645_cfa-mir-27a:mirbase
Length = 60
Score = 111 bits (56), Expect = 7e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 11 gggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtggctaagttccg 70
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggcttagctgcttgtgagcagagtccacaccaagtcgtgttcacagtggctaagttccg 60
>31797_mmu-mir-27a:mirbase
Length = 87
Score = 109 bits (55), Expect = 3e-25
Identities = 68/71 (95%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 1 ctgaggagcagggcttagctgcttgtgagcagggtccaca-ccaagtcgtgttcacagtg 59
||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||
Sbjct: 5 ctgaggagcagggcttagctgcttgtgagcaaggtccacagcaaagtcgtgttcacagtg 64
Query: 60 gctaagttccg 70
|||||||||||
Sbjct: 65 gctaagttccg 75
>33931_ssc-mir-27a:mirbase
Length = 82
Score = 107 bits (54), Expect = 1e-24
Identities = 64/66 (96%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtggctaa 64
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 9 ggagcagggcttagctgcttgtgagcagg-tccacagcaagtcgtgttcacagtggctaa 67
Query: 65 gttccg 70
||||||
Sbjct: 68 gttccg 73
>33154_bta-mir-27a:mirbase
Length = 78
Score = 99.6 bits (50), Expect = 3e-22
Identities = 63/66 (95%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtggctaa 64
||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||
Sbjct: 9 ggagcagggcttagctgcttgtgagcagg-tccacatcaaatcgtgttcacagtggctaa 67
Query: 65 gttccg 70
||||||
Sbjct: 68 gttccg 73
>33155_bta-mir-27a:mirbase
Length = 78
Score = 99.6 bits (50), Expect = 3e-22
Identities = 63/66 (95%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtggctaa 64
||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||
Sbjct: 9 ggagcagggcttagctgcttgtgagcagg-tccacatcaaatcgtgttcacagtggctaa 67
Query: 65 gttccg 70
||||||
Sbjct: 68 gttccg 73
>32680_rno-mir-27a:mirbase
Length = 87
Score = 93.7 bits (47), Expect = 2e-20
Identities = 63/67 (94%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccaca-ccaagtcgtgttcacagtggcta 63
||||||||||||||||||||||||||| |||| ||| | |||||||||||||||||||||
Sbjct: 9 ggagcagggcttagctgcttgtgagcaaggtctacagcaaagtcgtgttcacagtggcta 68
Query: 64 agttccg 70
|||||||
Sbjct: 69 agttccg 75
>27351_mdo-mir-27a:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 6e-08
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 2 tgaggagcagggcttagctgc-ttgtgagcagggtccacaccaagtcgtgttcacagtgg 60
||||||||||| ||||||||| |||||| ||| ||| || || | |||||||||||||
Sbjct: 6 tgaggagcaggacttagctgccttgtgaacagagtcagcatcatattgtgttcacagtgg 65
Query: 61 ctaagttccg 70
||||||||||
Sbjct: 66 ctaagttccg 75
>31444_oan-mir-27a:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 cgtgttcacagtggctaagttccg 70
||||||||||||||||||||||||
Sbjct: 49 cgtgttcacagtggctaagttccg 72
>25723_xtr-mir-27a:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttccg 70
||||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttccg 70
>34237_dre-mir-27a:mirbase
Length = 131
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttccg 70
||||||||||||||||||||||
Sbjct: 77 tgttcacagtggctaagttccg 98
>25449_pma-mir-27a:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttcc 69
|||||||||||||||||||||
Sbjct: 48 tgttcacagtggctaagttcc 68
>25450_pma-mir-27b:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 gtgttcacagtggctaagttc 68
|||||||||||||||||||||
Sbjct: 46 gtgttcacagtggctaagttc 66
>25725_xtr-mir-27c-1:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttcc 69
|||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttcc 72
>25726_xtr-mir-27c-2:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttcc 69
|||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttcc 72
>25724_xtr-mir-27b:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>25910_gga-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>26416_tgu-mir-27:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>26646_cfa-mir-27b:mirbase
Length = 63
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 41 tgttcacagtggctaagttc 60
>26967_eca-mir-27b:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttc 66
>27352_mdo-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>27674_mml-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>28384_hsa-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>30170_ptr-mir-27b:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 58 tgttcacagtggctaagttc 77
>30775_ppy-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>31445_oan-mir-27b:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 70 tgttcacagtggctaagttc 89
>31798_mmu-mir-27b:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttc 66
>32681_rno-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>33156_bta-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>33932_ssc-mir-27b:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 50 tgttcacagtggctaagttc 69
>34238_dre-mir-27b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 55 tgttcacagtggctaagttc 74
>34240_dre-mir-27d:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 55 tgttcacagtggctaagttc 74
>34241_dre-mir-27e:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 63 tgttcacagtggctaagttc 82
>34566_fru-mir-27b:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttc 66
>34568_fru-mir-27e:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 58 tgttcacagtggctaagttc 77
>34713_tni-mir-27b:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttc 66
>34715_tni-mir-27e:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 58 tgttcacagtggctaagttc 77
