miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>26970_eca-mir-29a:mirbase
          Length = 65

 Score =  127 bits (64), Expect = 9e-31
 Identities = 64/64 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 61

              
Query: 61 ttat 64
          ||||
Sbjct: 62 ttat 65




>27493_age-mir-29a:mirbase
          Length = 64

 Score =  127 bits (64), Expect = 9e-31
 Identities = 64/64 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60

              
Query: 61 ttat 64
          ||||
Sbjct: 61 ttat 64




>27553_lla-mir-29a:mirbase
          Length = 64

 Score =  127 bits (64), Expect = 9e-31
 Identities = 64/64 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60

              
Query: 61 ttat 64
          ||||
Sbjct: 61 ttat 64




>27601_sla-mir-29a:mirbase
          Length = 64

 Score =  127 bits (64), Expect = 9e-31
 Identities = 64/64 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60

              
Query: 61 ttat 64
          ||||
Sbjct: 61 ttat 64




>27676_mml-mir-29a:mirbase
          Length = 64

 Score =  127 bits (64), Expect = 9e-31
 Identities = 64/64 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60

              
Query: 61 ttat 64
          ||||
Sbjct: 61 ttat 64




>28275_ggo-mir-29a:mirbase
          Length = 64

 Score =  127 bits (64), Expect = 9e-31
 Identities = 64/64 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60

              
Query: 61 ttat 64
          ||||
Sbjct: 61 ttat 64




>28387_hsa-mir-29a:mirbase
          Length = 64

 Score =  127 bits (64), Expect = 9e-31
 Identities = 64/64 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60

              
Query: 61 ttat 64
          ||||
Sbjct: 61 ttat 64




>30062_ppa-mir-29a:mirbase
          Length = 64

 Score =  127 bits (64), Expect = 9e-31
 Identities = 64/64 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60

              
Query: 61 ttat 64
          ||||
Sbjct: 61 ttat 64




>30172_ptr-mir-29a:mirbase
          Length = 64

 Score =  127 bits (64), Expect = 9e-31
 Identities = 64/64 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60

              
Query: 61 ttat 64
          ||||
Sbjct: 61 ttat 64




>30777_ppy-mir-29a:mirbase
          Length = 64

 Score =  127 bits (64), Expect = 9e-31
 Identities = 64/64 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60

              
Query: 61 ttat 64
          ||||
Sbjct: 61 ttat 64




>33158_bta-mir-29a:mirbase
          Length = 64

 Score =  127 bits (64), Expect = 9e-31
 Identities = 64/64 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60

              
Query: 61 ttat 64
          ||||
Sbjct: 61 ttat 64




>33935_ssc-mir-29a:mirbase
          Length = 86

 Score =  127 bits (64), Expect = 9e-31
 Identities = 64/64 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 71

              
Query: 61 ttat 64
          ||||
Sbjct: 72 ttat 75




>26648_cfa-mir-29a:mirbase
          Length = 60

 Score =  119 bits (60), Expect = 2e-28
 Identities = 60/60 (100%)
 Strand = Plus / Plus

                                                                      
Query: 4  actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 63
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  actgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggtta 60




>31802_mmu-mir-29a:mirbase
          Length = 88

 Score =  119 bits (60), Expect = 2e-28
 Identities = 63/64 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
          ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 13 atgactgatttcttttggtgttcagagtcaatagaattttctagcaccatctgaaatcgg 72

              
Query: 61 ttat 64
          ||||
Sbjct: 73 ttat 76




>32683_rno-mir-29a:mirbase
          Length = 88

 Score =  119 bits (60), Expect = 2e-28
 Identities = 63/64 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
          ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 13 atgactgatttcttttggtgttcagagtcaatagaattttctagcaccatctgaaatcgg 72

              
Query: 61 ttat 64
          ||||
Sbjct: 73 ttat 76




>33044_rno-mir-3556a:mirbase
          Length = 118

 Score =  119 bits (60), Expect = 2e-28
 Identities = 63/64 (98%)
 Strand = Plus / Minus

                                                                      
Query: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
          ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 88 atgactgatttcttttggtgttcagagtcaatagaattttctagcaccatctgaaatcgg 29

              
Query: 61 ttat 64
          ||||
Sbjct: 28 ttat 25




>27354_mdo-mir-29a:mirbase
          Length = 64

 Score =  111 bits (56), Expect = 6e-26
 Identities = 62/64 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
          |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 1  atgactgatttcttttggtgttcagagtcaatatcattttctagcaccatttgaaatcgg 60

              
Query: 61 ttat 64
          ||||
Sbjct: 61 ttat 64




>31446_oan-mir-29a-1:mirbase
          Length = 118

 Score =  111 bits (56), Expect = 6e-26
 Identities = 62/64 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
          |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 29 atgactgatttcttttggtgttcagagtcaatatcattttctagcaccatttgaaatcgg 88

              
Query: 61 ttat 64
          ||||
Sbjct: 89 ttat 92




>25911_gga-mir-29a:mirbase
          Length = 89

 Score =  103 bits (52), Expect = 1e-23
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
          |||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||
Sbjct: 14 atgactgatttcttttggtgttcagagtcaataatattttctagcaccatttgaaatcgg 73

              
Query: 61 ttat 64
          ||||
Sbjct: 74 ttat 77




>26417_tgu-mir-29a-1:mirbase
          Length = 71

 Score = 93.7 bits (47), Expect = 1e-20
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                      
Query: 2  tgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggt 61
          ||||||||||||||||||||||||||||||||  | ||||||||||||| ||||||||||
Sbjct: 1  tgactgatttcttttggtgttcagagtcaataataatttctagcaccatttgaaatcggt 60

             
Query: 62 tat 64
          |||
Sbjct: 61 tat 63




>34569_fru-mir-29a-1:mirbase
          Length = 71

 Score = 67.9 bits (34), Expect = 8e-13
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                      
Query: 2  tgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggt 61
          |||||||||||||||||||||||||||| |  |   ||||||||||||| ||||||||||
Sbjct: 5  tgactgatttcttttggtgttcagagtccaattctgtttctagcaccatttgaaatcggt 64

            
Query: 62 ta 63
          ||
Sbjct: 65 ta 66




>25727_xtr-mir-29a:mirbase
          Length = 87

 Score = 65.9 bits (33), Expect = 3e-12
 Identities = 57/64 (89%), Gaps = 2/64 (3%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcgg 60
          |||||||||||||| ||||||||||||||  | |  |||||||||||||| |||||||||
Sbjct: 14 atgactgatttcttctggtgttcagagtc--ttttgttttctagcaccatttgaaatcgg 71

              
Query: 61 ttat 64
          ||||
Sbjct: 72 ttat 75




>34716_tni-mir-29a-1:mirbase
          Length = 72

 Score = 60.0 bits (30), Expect = 2e-10
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                      
Query: 2  tgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggt 61
          |||| ||||||||||||||||||||||| |  |   ||||||||||||| ||||||||||
Sbjct: 5  tgaccgatttcttttggtgttcagagtccaattctgtttctagcaccatttgaaatcggt 64

            
Query: 62 ta 63
          ||
Sbjct: 65 ta 66




>34243_dre-mir-29a-2:mirbase
          Length = 71

 Score = 52.0 bits (26), Expect = 5e-08
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                      
Query: 2  tgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggt 61
          |||| |||||||||||||||||||||||  |     ||||||||||||| ||||||||||
Sbjct: 5  tgaccgatttcttttggtgttcagagtcttttggggtttctagcaccatttgaaatcggt 64

            
Query: 62 ta 63
          ||
Sbjct: 65 ta 66




>26418_tgu-mir-29a-2:mirbase
          Length = 71

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                      
Query: 2  tgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggt 61
          |||| ||||||| |||||||||||||||    |  || ||||||||||| ||||||||||
Sbjct: 1  tgaccgatttctcttggtgttcagagtctcagtttttgtctagcaccatttgaaatcggt 60

             
Query: 62 tat 64
          |||
Sbjct: 61 tat 63




>31447_oan-mir-29a-2:mirbase
          Length = 113

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                      
Query: 2  tgactgatttcttttggtgttcagagtcaatataattttctagcaccatctgaaatcggt 61
          |||| ||||||| |||||||||||||||    |  || ||||||||||| ||||||||||
Sbjct: 24 tgaccgatttctcttggtgttcagagtctcagttcttgtctagcaccatttgaaatcggt 83

             
Query: 62 tat 64
          |||
Sbjct: 84 tat 86




>34570_fru-mir-29a-2:mirbase
          Length = 126

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 39  ttctagcaccatctgaaatcggttat 64
           |||||||||||| |||||||||||||
Sbjct: 81  ttctagcaccatttgaaatcggttat 106




>34717_tni-mir-29a-2:mirbase
          Length = 100

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 39 ttctagcaccatctgaaatcggttat 64
          |||||||||||| |||||||||||||
Sbjct: 57 ttctagcaccatttgaaatcggttat 82




>25729_xtr-mir-29c:mirbase
          Length = 90

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 40 tctagcaccatctgaaatcggttat 64
          ||||||||||| |||||||||||||
Sbjct: 54 tctagcaccatttgaaatcggttat 78




>25914_gga-mir-29c:mirbase
          Length = 89

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 40 tctagcaccatctgaaatcggttat 64
          ||||||||||| |||||||||||||
Sbjct: 53 tctagcaccatttgaaatcggttat 77



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 2  tgactgatttcttttggtgttcagagtc 29
          |||| ||||||| |||||||||||||||
Sbjct: 15 tgaccgatttctcttggtgttcagagtc 42




>26973_eca-mir-29c:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 40 tctagcaccatctgaaatcggttat 64
          ||||||||||| |||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggttat 76




>26974_eca-mir-29c-2:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 40 tctagcaccatctgaaatcggttat 64
          ||||||||||| |||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggttat 76




>27679_mml-mir-29c:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 40 tctagcaccatctgaaatcggttat 64
          ||||||||||| |||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggttat 76




>28390_hsa-mir-29c:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 40 tctagcaccatctgaaatcggttat 64
          ||||||||||| |||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggttat 76




>30175_ptr-mir-29c:mirbase
          Length = 87

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 40 tctagcaccatctgaaatcggttat 64
          ||||||||||| |||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggttat 76




>30780_ppy-mir-29c:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 40 tctagcaccatctgaaatcggttat 64
          ||||||||||| |||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggttat 76




>31805_mmu-mir-29c:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 40 tctagcaccatctgaaatcggttat 64
          ||||||||||| |||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggttat 76




>32686_rno-mir-29c:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 40 tctagcaccatctgaaatcggttat 64
          ||||||||||| |||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggttat 76




>33045_rno-mir-3556b:mirbase
          Length = 107

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 40 tctagcaccatctgaaatcggttat 64
          ||||||||||| |||||||||||||
Sbjct: 48 tctagcaccatttgaaatcggttat 24




>33161_bta-mir-29c:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 40 tctagcaccatctgaaatcggttat 64
          ||||||||||| |||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggttat 76




>33937_ssc-mir-29c:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 40 tctagcaccatctgaaatcggttat 64
          ||||||||||| |||||||||||||
Sbjct: 52 tctagcaccatttgaaatcggttat 76




>34242_dre-mir-29a-1:mirbase
          Length = 126

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 40  tctagcaccatctgaaatcggttat 64
           ||||||||||| |||||||||||||
Sbjct: 79  tctagcaccatttgaaatcggttat 103




>25451_pma-mir-29a:mirbase
          Length = 83

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 1  atgactgatttcttttggtgttcagagt 28
          ||||||||||||| |||||||| |||||
Sbjct: 7  atgactgatttctcttggtgtttagagt 34




>26652_cfa-mir-29c-2:mirbase
          Length = 58

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 40 tctagcaccatctgaaatcggtta 63
          ||||||||||| ||||||||||||
Sbjct: 35 tctagcaccatttgaaatcggtta 58




>26651_cfa-mir-29c-1:mirbase
          Length = 58

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 40 tctagcaccatctgaaatcggtta 63
          ||||||||||| ||||||||||||
Sbjct: 35 tctagcaccatttgaaatcggtta 58