miRNEST 2.0, an integrative microRNA resource :: BLAST
>27689_mml-mir-33a:mirbase
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 ctgcggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgcggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagt 60
Query: 61 gcattacag 69
|||||||||
Sbjct: 61 gcattacag 69
>30789_ppy-mir-33:mirbase
Length = 69
Score = 129 bits (65), Expect = 3e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 1 ctgcggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgcggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagt 60
Query: 61 gcattacag 69
|||| ||||
Sbjct: 61 gcatcacag 69
>28284_ggo-mir-33:mirbase
Length = 69
Score = 121 bits (61), Expect = 6e-29
Identities = 64/65 (98%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagtgcat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagtgcat 64
Query: 65 tacag 69
||||
Sbjct: 65 cacag 69
>28399_hsa-mir-33a:mirbase
Length = 69
Score = 121 bits (61), Expect = 6e-29
Identities = 64/65 (98%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagtgcat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagtgcat 64
Query: 65 tacag 69
||||
Sbjct: 65 cacag 69
>30071_ppa-mir-33:mirbase
Length = 69
Score = 121 bits (61), Expect = 6e-29
Identities = 64/65 (98%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagtgcat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagtgcat 64
Query: 65 tacag 69
||||
Sbjct: 65 cacag 69
>30185_ptr-mir-33a:mirbase
Length = 69
Score = 121 bits (61), Expect = 6e-29
Identities = 64/65 (98%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagtgcat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagtgcat 64
Query: 65 tacag 69
||||
Sbjct: 65 cacag 69
>26982_eca-mir-33a:mirbase
Length = 69
Score = 113 bits (57), Expect = 2e-26
Identities = 63/65 (96%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagtgcat 64
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5 ggtgcattgtagttgcattgcatgttctggcggtacccatgcaatgtttccacagtgcat 64
Query: 65 tacag 69
||||
Sbjct: 65 cacag 69
>33173_bta-mir-33a:mirbase
Length = 69
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 1 ctgcggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagt 60
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 1 ctgcggtgcattgtagttgcattgcatgttctggcggtacccgtgcaatgtttccacagt 60
Query: 61 gcattacag 69
|||| ||||
Sbjct: 61 gcatcacag 69
>26661_cfa-mir-33:mirbase
Length = 61
Score = 101 bits (51), Expect = 6e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagtgcat 64
||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 1 gtgcattgtagttgcattgcatgttctggcggtacccgtgcaatgtttccacagtgcat 59
>32696_rno-mir-33:mirbase
Length = 69
Score = 87.7 bits (44), Expect = 9e-19
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagtgcat 64
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 5 ggtgcattgtagttgcattgcatgttctggcagtacctgtgcaatgtttccacagtgcat 64
>31814_mmu-mir-33:mirbase
Length = 69
Score = 79.8 bits (40), Expect = 2e-16
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagtgcat 64
|||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 5 ggtgcattgtagttgcattgcatgttctggcaatacctgtgcaatgtttccacagtgcat 64
>31460_oan-mir-33b:mirbase
Length = 85
Score = 63.9 bits (32), Expect = 1e-11
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagtgcatt 65
||||||||||||||||||||| |||| || |||| ||||||||| ||||||||||||
Sbjct: 14 gtgcattgtagttgcattgcacgttccggcagtactggtgcaatgttcccacagtgcatt 73
Query: 66 acag 69
||||
Sbjct: 74 acag 77
>31461_oan-mir-33b:mirbase
Length = 85
Score = 63.9 bits (32), Expect = 1e-11
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagtgcatt 65
||||||||||||||||||||| |||| || |||| ||||||||| ||||||||||||
Sbjct: 14 gtgcattgtagttgcattgcacgttccggcagtactggtgcaatgttcccacagtgcatt 73
Query: 66 acag 69
||||
Sbjct: 74 acag 77
>37721_tca-mir-33:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgtt 30
||||||||||||||||||||||||||
Sbjct: 24 ggtgcattgtagttgcattgcatgtt 49
>37722_tca-mir-33:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgtt 30
||||||||||||||||||||||||||
Sbjct: 24 ggtgcattgtagttgcattgcatgtt 49
>24657_bfl-mir-33-1:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgt 29
|||||||||||||||||||||||||
Sbjct: 6 ggtgcattgtagttgcattgcatgt 30
>24658_bfl-mir-33-2:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgt 29
|||||||||||||||||||||||||
Sbjct: 15 ggtgcattgtagttgcattgcatgt 39
>25740_xtr-mir-33a:mirbase
Length = 68
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgt 29
|||||||||||||||||||||||||
Sbjct: 5 ggtgcattgtagttgcattgcatgt 29
>25924_gga-mir-33:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgcatgttctgg 34
|||||||||||||||||||||||| ||||
Sbjct: 6 gtgcattgtagttgcattgcatgtgctgg 34
>26431_tgu-mir-33:mirbase
Length = 70
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgcatgtt 30
|||||||||||||||||||||||||
Sbjct: 11 gtgcattgtagttgcattgcatgtt 35
>38738_cte-mir-33:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatg 28
||||||||||||||||||||||||
Sbjct: 20 ggtgcattgtagttgcattgcatg 43
>31458_oan-mir-33a:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgcatgt 29
||||||||||||||||||||||||
Sbjct: 22 gtgcattgtagttgcattgcatgt 45
>31459_oan-mir-33a:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgcatgt 29
||||||||||||||||||||||||
Sbjct: 22 gtgcattgtagttgcattgcatgt 45
>38857_lgi-mir-33:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcat 27
|||||||||||||||||||||||
Sbjct: 20 ggtgcattgtagttgcattgcat 42
>35357_ame-mir-33:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgcatg 28
|||||||||||||||||||||||
Sbjct: 31 gtgcattgtagttgcattgcatg 53
>37644_nvi-mir-33:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgcatg 28
|||||||||||||||||||||||
Sbjct: 31 gtgcattgtagttgcattgcatg 53
>27359_mdo-mir-33:mirbase
Length = 68
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgca 26
||||||||||||||||||||||
Sbjct: 1 ggtgcattgtagttgcattgca 22
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 44 tgcaatgtttccacagtgcat 64
|||||||||||||||||||||
Sbjct: 39 tgcaatgtttccacagtgcat 59
>35183_aae-mir-33:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgca 26
||||||||||||||||||||||
Sbjct: 8 ggtgcattgtagttgcattgca 29
>36014_cqu-mir-33:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgca 26
||||||||||||||||||||||
Sbjct: 2 ggtgcattgtagttgcattgca 23
>24815_cin-mir-33:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgca 26
|||||||||||||||||||||
Sbjct: 16 gtgcattgtagttgcattgca 36
>25741_xtr-mir-33b:mirbase
Length = 69
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgt 29
|||||||||| ||||||||||||||
Sbjct: 5 ggtgcattgttgttgcattgcatgt 29
>35004_dpu-mir-33:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgca 26
|||||||||||||||||||||
Sbjct: 21 gtgcattgtagttgcattgca 41
>35530_bmo-mir-33:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgca 26
|||||||||||||||||||||
Sbjct: 11 gtgcattgtagttgcattgca 31
>25464_pma-mir-33a:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattg 24
||||||||||||||||||||
Sbjct: 15 ggtgcattgtagttgcattg 34
>33174_bta-mir-33b:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 3 gcggtgcattgtagttgcattgcatgt 29
||||||||||| ||||||||||||||
Sbjct: 13 gcggtgcattgctgttgcattgcatgt 39
>34814_spu-mir-33:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcat 27
|||||||||| ||||||||||||
Sbjct: 20 ggtgcattgtcgttgcattgcat 42
