miRNEST 2.0, an integrative microRNA resource :: BLAST
>27562_lla-mir-99a:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 cccattggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cccattggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgctt 60
Query: 61 ctatgggtctgtgtcagtgtg 81
|||||||||||||||||||||
Sbjct: 61 ctatgggtctgtgtcagtgtg 81
>27702_mml-mir-99a:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 cccattggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cccattggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgctt 60
Query: 61 ctatgggtctgtgtcagtgtg 81
|||||||||||||||||||||
Sbjct: 61 ctatgggtctgtgtcagtgtg 81
>28292_ggo-mir-99a:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 cccattggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cccattggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgctt 60
Query: 61 ctatgggtctgtgtcagtgtg 81
|||||||||||||||||||||
Sbjct: 61 ctatgggtctgtgtcagtgtg 81
>28412_hsa-mir-99a:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 cccattggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cccattggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgctt 60
Query: 61 ctatgggtctgtgtcagtgtg 81
|||||||||||||||||||||
Sbjct: 61 ctatgggtctgtgtcagtgtg 81
>30079_ppa-mir-99a:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 cccattggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cccattggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgctt 60
Query: 61 ctatgggtctgtgtcagtgtg 81
|||||||||||||||||||||
Sbjct: 61 ctatgggtctgtgtcagtgtg 81
>30196_ptr-mir-99a:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 cccattggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cccattggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgctt 60
Query: 61 ctatgggtctgtgtcagtgtg 81
|||||||||||||||||||||
Sbjct: 61 ctatgggtctgtgtcagtgtg 81
>33185_bta-mir-99a:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 cccattggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cccattggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgctt 60
Query: 61 ctatgggtctgtgtcagtgtg 81
|||||||||||||||||||||
Sbjct: 61 ctatgggtctgtgtcagtgtg 81
>33956_ssc-mir-99a:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 2 ccattggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccattggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttc 60
Query: 62 tatgggtctgtgtcagtgtg 81
||||||||||||||||||||
Sbjct: 61 tatgggtctgtgtcagtgtg 80
>26995_eca-mir-99a-2:mirbase
Length = 81
Score = 153 bits (77), Expect = 2e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 1 cccattggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgctt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 cccattggcataaacccgtagatccgatcttgtggtgaagtggacctcacaagctcgctt 60
Query: 61 ctatgggtctgtgtcagtgtg 81
|||||||||||||||||||||
Sbjct: 61 ctatgggtctgtgtcagtgtg 81
>30802_ppy-mir-99a:mirbase
Length = 81
Score = 153 bits (77), Expect = 2e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 1 cccattggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgctt 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 cccattggcataaacccgtagatccgatcttgtggtaaagtggaccgcacaagctcgctt 60
Query: 61 ctatgggtctgtgtcagtgtg 81
|||||||||||||||||||||
Sbjct: 61 ctatgggtctgtgtcagtgtg 81
>32706_rno-mir-99a:mirbase
Length = 81
Score = 145 bits (73), Expect = 5e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 cccattggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 cccattggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgttt 60
Query: 61 ctatgggtctgtgtcagtgtg 81
||||||||||||| |||||||
Sbjct: 61 ctatgggtctgtggcagtgtg 81
>25929_gga-mir-99a:mirbase
Length = 81
Score = 117 bits (59), Expect = 1e-27
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 4 attggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttcta 63
||||||||||||||||||||||||||||||| |||| || || |||||||||||||||||
Sbjct: 4 attggcataaacccgtagatccgatcttgtgttgaaatgcactgcacaagctcgcttcta 63
Query: 64 tgggtctgtgtcagt 78
|||||||||||||||
Sbjct: 64 tgggtctgtgtcagt 78
>31825_mmu-mir-99a:mirbase
Length = 65
Score = 113 bits (57), Expect = 2e-26
Identities = 63/65 (96%)
Strand = Plus / Plus
Query: 9 cataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttctatgggt 68
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 1 cataaacccgtagatccgatcttgtggtgaagtggaccgcgcaagctcgtttctatgggt 60
Query: 69 ctgtg 73
|||||
Sbjct: 61 ctgtg 65
>26673_cfa-mir-99a-1:mirbase
Length = 59
Score = 109 bits (55), Expect = 3e-25
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 13 aacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttctatgggtctg 71
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 aacccgtagatccgatcttgtggtgaagtggacggcacaagctcgcttctatgggtctg 59
>31470_oan-mir-99:mirbase
Length = 102
Score = 105 bits (53), Expect = 5e-24
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 5 ttggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttctat 64
|||||||||||||||||||||||||||||||||||||| | ||||||||||| ||| |
Sbjct: 16 ttggcataaacccgtagatccgatcttgtggtgaagtgaaatacacaagctcgcctctct 75
Query: 65 gggtctgtgtcagtgtg 81
|||||||||||||||||
Sbjct: 76 gggtctgtgtcagtgtg 92
>26439_tgu-mir-99-2:mirbase
Length = 71
Score = 99.6 bits (50), Expect = 3e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 4 attggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttcta 63
||||||||||||||||||||||||||||||| |||| | || |||||||||||||||||
Sbjct: 2 attggcataaacccgtagatccgatcttgtgttgaaacgcactgcacaagctcgcttcta 61
Query: 64 tgggtctgtg 73
||||||||||
Sbjct: 62 tgggtctgtg 71
>26438_tgu-mir-99-1:mirbase
Length = 71
Score = 99.6 bits (50), Expect = 3e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 4 attggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttcta 63
||||||||||||||||||||||||||||||| |||| | || |||||||||||||||||
Sbjct: 2 attggcataaacccgtagatccgatcttgtgttgaaacgcactgcacaagctcgcttcta 61
Query: 64 tgggtctgtg 73
||||||||||
Sbjct: 62 tgggtctgtg 71
>25754_xtr-mir-99:mirbase
Length = 71
Score = 71.9 bits (36), Expect = 7e-14
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 9 cataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttctatgggt 68
||||||||||||||||||||||||||||||| | || |||||||| ||||||||||
Sbjct: 4 cataaacccgtagatccgatcttgtggtgaattcctttgctcaagctcgtttctatgggt 63
Query: 69 ctgtgtca 76
||||||||
Sbjct: 64 ctgtgtca 71
>34261_dre-mir-99-1:mirbase
Length = 84
Score = 54.0 bits (27), Expect = 2e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 13 aacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttctatgggtctgt 72
|||||||||||||||||||||| | | | || ||||||||||| |||||||||||| |
Sbjct: 14 aacccgtagatccgatcttgtgataagtttgatggcacaagctcgattctatgggtctct 73
Query: 73 gtc 75
|||
Sbjct: 74 gtc 76
>26674_cfa-mir-99a-2:mirbase
Length = 57
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 13 aacccgtagatccgatcttgtggtga 38
||||||||||||||||||||||||||
Sbjct: 1 aacccgtagatccgatcttgtggtga 26
>34262_dre-mir-99-2:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtgg 35
||||||||||||||||||||||||
Sbjct: 11 aaacccgtagatccgatcttgtgg 34
>27364_mdo-mir-100:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtggtga 38
|||||||||||||||| ||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtggtga 38
>31471_oan-mir-100:mirbase
Length = 81
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtggtga 38
|||||||||||||||| ||||||||||
Sbjct: 13 aaacccgtagatccgaacttgtggtga 39
>34263_dre-mir-100-1:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtggtga 38
|||||||||||||||| ||||||||||
Sbjct: 23 aaacccgtagatccgaacttgtggtga 49
>34579_fru-mir-100:mirbase
Length = 63
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtggtga 38
|||||||||||||||| ||||||||||
Sbjct: 4 aaacccgtagatccgaacttgtggtga 30
>34726_tni-mir-100:mirbase
Length = 63
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtggtga 38
|||||||||||||||| ||||||||||
Sbjct: 4 aaacccgtagatccgaacttgtggtga 30
>24672_bfl-mir-100:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 cataaacccgtagatccgatcttgtg 34
||||||||||||||||||| ||||||
Sbjct: 17 cataaacccgtagatccgaacttgtg 42
>25468_pma-mir-100a:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtggtg 37
|||||||||||||||| |||||||||
Sbjct: 16 aaacccgtagatccgaacttgtggtg 41
>25470_pma-mir-100c:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 aaacccgtagatccgatcttgtggtg 37
|||||||||||||||| |||||||||
Sbjct: 71 aaacccgtagatccgaacttgtggtg 46
>25755_xtr-mir-100:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 cataaacccgtagatccgatcttgtg 34
||||||||||||||||||| ||||||
Sbjct: 6 cataaacccgtagatccgaacttgtg 31
>26997_eca-mir-100:mirbase
Length = 55
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 aacccgtagatccgatcttgtggtga 38
||||||||||||||| ||||||||||
Sbjct: 1 aacccgtagatccgaacttgtggtga 26
>27501_age-mir-100:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtggtg 37
|||||||||||||||| |||||||||
Sbjct: 12 aaacccgtagatccgaacttgtggtg 37
>27563_lla-mir-100:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtggtg 37
|||||||||||||||| |||||||||
Sbjct: 12 aaacccgtagatccgaacttgtggtg 37
>27610_sla-mir-100:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtggtg 37
|||||||||||||||| |||||||||
Sbjct: 12 aaacccgtagatccgaacttgtggtg 37
>33187_bta-mir-100:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtggtg 37
|||||||||||||||| |||||||||
Sbjct: 12 aaacccgtagatccgaacttgtggtg 37
>34264_dre-mir-100-2:mirbase
Length = 75
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtggtg 37
|||||||||||||||| |||||||||
Sbjct: 10 aaacccgtagatccgaacttgtggtg 35
>38866_lgi-mir-100:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 10 ataaacccgtagatccgatcttgtg 34
|||||||||||||||||| ||||||
Sbjct: 18 ataaacccgtagatccgaacttgtg 42
>25930_gga-mir-100:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtggt 36
|||||||||||||||| ||||||||
Sbjct: 12 aaacccgtagatccgaacttgtggt 36
>27704_mml-mir-100:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtggt 36
|||||||||||||||| ||||||||
Sbjct: 12 aaacccgtagatccgaacttgtggt 36
>28293_ggo-mir-100:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtggt 36
|||||||||||||||| ||||||||
Sbjct: 12 aaacccgtagatccgaacttgtggt 36
>28414_hsa-mir-100:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtggt 36
|||||||||||||||| ||||||||
Sbjct: 12 aaacccgtagatccgaacttgtggt 36
>30080_ppa-mir-100:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtggt 36
|||||||||||||||| ||||||||
Sbjct: 12 aaacccgtagatccgaacttgtggt 36
>30198_ptr-mir-100:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtggt 36
|||||||||||||||| ||||||||
Sbjct: 12 aaacccgtagatccgaacttgtggt 36
>30803_ppy-mir-100:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtggt 36
|||||||||||||||| ||||||||
Sbjct: 12 aaacccgtagatccgaacttgtggt 36
>34877_sko-mir-100:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 taaacccgtagatccgatcttgtg 34
||||||||||||||||| ||||||
Sbjct: 19 taaacccgtagatccgaacttgtg 42
>26440_tgu-mir-100-1:mirbase
Length = 111
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtg 34
|||||||||||||||| ||||||
Sbjct: 10 aaacccgtagatccgaacttgtg 32
>26441_tgu-mir-100-2:mirbase
Length = 111
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtg 34
|||||||||||||||| ||||||
Sbjct: 10 aaacccgtagatccgaacttgtg 32
>31827_mmu-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtg 34
|||||||||||||||| ||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>32708_rno-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtg 34
|||||||||||||||| ||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>33958_ssc-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtg 34
|||||||||||||||| ||||||
Sbjct: 15 aaacccgtagatccgaacttgtg 37
>35288_aga-mir-100:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 12 aaacccgtagatccgatcttgtg 34
|||||||||||||||| ||||||
Sbjct: 14 aaacccgtagatccgaacttgtg 36
>35366_ame-mir-100:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 aacccgtagatccgatcttgtgg 35
||||||||||||||| |||||||
Sbjct: 19 aacccgtagatccgaacttgtgg 41
>37648_nvi-mir-100:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 aacccgtagatccgatcttgtgg 35
||||||||||||||| |||||||
Sbjct: 19 aacccgtagatccgaacttgtgg 41
>37737_tca-mir-100:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 aacccgtagatccgatcttgtgg 35
||||||||||||||| |||||||
Sbjct: 10 aacccgtagatccgaacttgtgg 32
>37738_tca-mir-100:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 aacccgtagatccgatcttgtgg 35
||||||||||||||| |||||||
Sbjct: 10 aacccgtagatccgaacttgtgg 32
