miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>27566_lla-mir-105:mirbase
          Length = 81

 Score =  161 bits (81), Expect = 9e-41
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60

                               
Query: 61 gagcatgtgctacggtgtcta 81
          |||||||||||||||||||||
Sbjct: 61 gagcatgtgctacggtgtcta 81




>27612_sla-mir-105:mirbase
          Length = 81

 Score =  161 bits (81), Expect = 9e-41
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60

                               
Query: 61 gagcatgtgctacggtgtcta 81
          |||||||||||||||||||||
Sbjct: 61 gagcatgtgctacggtgtcta 81




>27709_mml-mir-105-1:mirbase
          Length = 81

 Score =  161 bits (81), Expect = 9e-41
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60

                               
Query: 61 gagcatgtgctacggtgtcta 81
          |||||||||||||||||||||
Sbjct: 61 gagcatgtgctacggtgtcta 81




>28296_ggo-mir-105:mirbase
          Length = 81

 Score =  161 bits (81), Expect = 9e-41
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60

                               
Query: 61 gagcatgtgctacggtgtcta 81
          |||||||||||||||||||||
Sbjct: 61 gagcatgtgctacggtgtcta 81




>28421_hsa-mir-105-1:mirbase
          Length = 81

 Score =  161 bits (81), Expect = 9e-41
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60

                               
Query: 61 gagcatgtgctacggtgtcta 81
          |||||||||||||||||||||
Sbjct: 61 gagcatgtgctacggtgtcta 81




>30083_ppa-mir-105:mirbase
          Length = 81

 Score =  161 bits (81), Expect = 9e-41
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60

                               
Query: 61 gagcatgtgctacggtgtcta 81
          |||||||||||||||||||||
Sbjct: 61 gagcatgtgctacggtgtcta 81




>30809_ppy-mir-105:mirbase
          Length = 81

 Score =  161 bits (81), Expect = 9e-41
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60

                               
Query: 61 gagcatgtgctacggtgtcta 81
          |||||||||||||||||||||
Sbjct: 61 gagcatgtgctacggtgtcta 81




>26680_cfa-mir-105a:mirbase
          Length = 81

 Score =  153 bits (77), Expect = 2e-38
 Identities = 80/81 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
          |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60

                               
Query: 61 gagcatgtgctacggtgtcta 81
          |||||||||||||||||||||
Sbjct: 61 gagcatgtgctacggtgtcta 81




>33192_bta-mir-105a:mirbase
          Length = 81

 Score =  153 bits (77), Expect = 2e-38
 Identities = 80/81 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
          |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60

                               
Query: 61 gagcatgtgctacggtgtcta 81
          |||||||||||||||||||||
Sbjct: 61 gagcatgtgctacggtgtcta 81




>33963_ssc-mir-105-1:mirbase
          Length = 81

 Score =  153 bits (77), Expect = 2e-38
 Identities = 80/81 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
          |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tgtgcatcgtagtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60

                               
Query: 61 gagcatgtgctacggtgtcta 81
          |||||||||||||||||||||
Sbjct: 61 gagcatgtgctacggtgtcta 81




>27710_mml-mir-105-2:mirbase
          Length = 81

 Score =  145 bits (73), Expect = 5e-36
 Identities = 79/81 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
          |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgcttatgcaccacggatgttt 60

                               
Query: 61 gagcatgtgctacggtgtcta 81
          |||||||||||| ||||||||
Sbjct: 61 gagcatgtgctatggtgtcta 81




>28422_hsa-mir-105-2:mirbase
          Length = 81

 Score =  145 bits (73), Expect = 5e-36
 Identities = 79/81 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
          |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgcttatgcaccacggatgttt 60

                               
Query: 61 gagcatgtgctacggtgtcta 81
          |||||||||||| ||||||||
Sbjct: 61 gagcatgtgctatggtgtcta 81




>30203_ptr-mir-105:mirbase
          Length = 81

 Score =  145 bits (73), Expect = 5e-36
 Identities = 79/81 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
          |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgcttatgcaccacggatgttt 60

                               
Query: 61 gagcatgtgctacggtgtcta 81
          |||||||||||| ||||||||
Sbjct: 61 gagcatgtgctatggtgtcta 81




>30810_ppy-mir-105-2:mirbase
          Length = 81

 Score =  145 bits (73), Expect = 5e-36
 Identities = 79/81 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
          |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgcttatgcaccacggatgttt 60

                               
Query: 61 gagcatgtgctacggtgtcta 81
          |||||||||||| ||||||||
Sbjct: 61 gagcatgtgctatggtgtcta 81




>27001_eca-mir-105:mirbase
          Length = 81

 Score =  129 bits (65), Expect = 3e-31
 Identities = 77/81 (95%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
          |||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 1  tgtgcatcgtagtcaaatgctcagactcctgtggtggccgttcatgcaccacggatgttt 60

                               
Query: 61 gagcatgtgctacggtgtcta 81
          |||||||||||| ||||||||
Sbjct: 61 gagcatgtgctatggtgtcta 81




>33964_ssc-mir-105-2:mirbase
          Length = 80

 Score =  129 bits (65), Expect = 3e-31
 Identities = 78/81 (96%), Gaps = 1/81 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
          |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 1  tgtgcatcgtggtcaaatgctcagactcct-tggtggctgcttatgcaccacggatgttt 59

                               
Query: 61 gagcatgtgctacggtgtcta 81
          |||||||||||| ||||||||
Sbjct: 60 gagcatgtgctatggtgtcta 80




>33193_bta-mir-105b:mirbase
          Length = 80

 Score =  121 bits (61), Expect = 8e-29
 Identities = 77/81 (95%), Gaps = 1/81 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
          |||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 1  tgtgcatcgtggtcaaatgctcagactcct-tggtggctgcttatgcaccatggatgttt 59

                               
Query: 61 gagcatgtgctacggtgtcta 81
          |||||||||||| ||||||||
Sbjct: 60 gagcatgtgctatggtgtcta 80




>26681_cfa-mir-105b:mirbase
          Length = 80

 Score =  105 bits (53), Expect = 5e-24
 Identities = 75/81 (92%), Gaps = 1/81 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgtgcatcgtggtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgttt 60
          |||||||| ||||||||||||||||||||| ||||||||||| |||||||| | ||||||
Sbjct: 1  tgtgcatcatggtcaaatgctcagactcct-tggtggctgcttatgcaccatgaatgttt 59

                               
Query: 61 gagcatgtgctacggtgtcta 81
          |||||||||||| ||||||||
Sbjct: 60 gagcatgtgctatggtgtcta 80




>32713_rno-mir-105:mirbase
          Length = 73

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                      
Query: 12 gtcaaatgctcagactcctgtggtggctgctcatgcaccacggatgtttgagcatgtgct 71
          ||||| ||||||||   |||||||||||||| ||| | ||||||||||||||||||||||
Sbjct: 3  gtcaagtgctcagatgtctgtggtggctgcttatgtatcacggatgtttgagcatgtgct 62

                    
Query: 72 acggtgtcta 81
          | ||| ||||
Sbjct: 63 atggtatcta 72




>31833_mmu-mir-105:mirbase
          Length = 80

 Score = 61.9 bits (31), Expect = 6e-11
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                     
Query: 30 tgtggtggctgctcatgcaccacggatgtttgagcatgtgcta 72
          ||||||||||||| |||||||||| ||| ||||||||||||||
Sbjct: 28 tgtggtggctgcttatgcaccacgaatgcttgagcatgtgcta 70