miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>28303_ggo-mir-130a:mirbase
          Length = 89

 Score =  176 bits (89), Expect = 2e-45
 Identities = 89/89 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tgctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgc 60

                                       
Query: 61 aatgttaaaagggcattggccgtgtagtg 89
          |||||||||||||||||||||||||||||
Sbjct: 61 aatgttaaaagggcattggccgtgtagtg 89




>28442_hsa-mir-130a:mirbase
          Length = 89

 Score =  176 bits (89), Expect = 2e-45
 Identities = 89/89 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tgctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgc 60

                                       
Query: 61 aatgttaaaagggcattggccgtgtagtg 89
          |||||||||||||||||||||||||||||
Sbjct: 61 aatgttaaaagggcattggccgtgtagtg 89




>30090_ppa-mir-130a:mirbase
          Length = 89

 Score =  176 bits (89), Expect = 2e-45
 Identities = 89/89 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tgctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgc 60

                                       
Query: 61 aatgttaaaagggcattggccgtgtagtg 89
          |||||||||||||||||||||||||||||
Sbjct: 61 aatgttaaaagggcattggccgtgtagtg 89




>30827_ppy-mir-130a:mirbase
          Length = 89

 Score =  176 bits (89), Expect = 2e-45
 Identities = 89/89 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tgctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgc 60

                                       
Query: 61 aatgttaaaagggcattggccgtgtagtg 89
          |||||||||||||||||||||||||||||
Sbjct: 61 aatgttaaaagggcattggccgtgtagtg 89




>30218_ptr-mir-130a:mirbase
          Length = 88

 Score =  174 bits (88), Expect = 7e-45
 Identities = 88/88 (100%)
 Strand = Plus / Plus

                                                                      
Query: 2  gctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgca 61
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgca 60

                                      
Query: 62 atgttaaaagggcattggccgtgtagtg 89
          ||||||||||||||||||||||||||||
Sbjct: 61 atgttaaaagggcattggccgtgtagtg 88




>27728_mml-mir-130a:mirbase
          Length = 81

 Score =  161 bits (81), Expect = 1e-40
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tgctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgc 60

                               
Query: 61 aatgttaaaagggcattggcc 81
          |||||||||||||||||||||
Sbjct: 61 aatgttaaaagggcattggcc 81




>33211_bta-mir-130a:mirbase
          Length = 89

 Score =  135 bits (68), Expect = 6e-33
 Identities = 77/80 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgc 60
          |||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1  tgctgcgggccggagctcttttcacattgtgctactgtctgcgcctgtcactagcagtgc 60

                              
Query: 61 aatgttaaaagggcattggc 80
          ||||||||||||||||||||
Sbjct: 61 aatgttaaaagggcattggc 80




>27380_mdo-mir-130a:mirbase
          Length = 76

 Score =  131 bits (66), Expect = 9e-32
 Identities = 72/74 (97%)
 Strand = Plus / Plus

                                                                      
Query: 7  tggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgtt 66
          |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| 
Sbjct: 1  tggccagagctcttttcacattgtgctactgtctgcacctatcactagcagtgcaatgta 60

                        
Query: 67 aaaagggcattggc 80
          ||||||||||||||
Sbjct: 61 aaaagggcattggc 74




>33979_ssc-mir-130a:mirbase
          Length = 79

 Score =  131 bits (66), Expect = 9e-32
 Identities = 72/74 (97%)
 Strand = Plus / Plus

                                                                      
Query: 8  ggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgtta 67
          |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 3  ggccggagctcttttcacattgtgctactgtctgcacctatcactagcagtgcaatgtta 62

                        
Query: 68 aaagggcattggcc 81
          ||||||||||||||
Sbjct: 63 aaagggcattggcc 76




>27022_eca-mir-130a:mirbase
          Length = 64

 Score =  111 bits (56), Expect = 8e-26
 Identities = 62/64 (96%)
 Strand = Plus / Plus

                                                                      
Query: 13 gagctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgttaaaagg 72
          ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 1  gagctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagg 60

              
Query: 73 gcat 76
          ||||
Sbjct: 61 gcat 64




>32731_rno-mir-130a:mirbase
          Length = 88

 Score =  111 bits (56), Expect = 8e-26
 Identities = 80/88 (90%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgc 60
          ||||||||||| |||||||||||||||||||||||||||| ||| |||  | ||||||||
Sbjct: 1  tgctgctggccggagctcttttcacattgtgctactgtctacacgtgtaccgagcagtgc 60

                                      
Query: 61 aatgttaaaagggcattggccgtgtagt 88
          |||||||||||||||| |||| ||||||
Sbjct: 61 aatgttaaaagggcatcggccttgtagt 88




>26698_cfa-mir-130a:mirbase
          Length = 62

 Score =  107 bits (54), Expect = 1e-24
 Identities = 60/62 (96%)
 Strand = Plus / Plus

                                                                      
Query: 15 gctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgttaaaagggc 74
          ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 1  gctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagggc 60

            
Query: 75 at 76
          ||
Sbjct: 61 at 62




>31485_oan-mir-130a:mirbase
          Length = 122

 Score = 91.7 bits (46), Expect = 8e-20
 Identities = 55/58 (94%)
 Strand = Plus / Plus

                                                                    
Query: 8  ggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgt 65
          |||| |||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 24 ggccggagctcttttcacattgtgctactgtctgcgcccgtcactagcagtgcaatgt 81




>33089_rno-mir-3590:mirbase
          Length = 74

 Score = 91.7 bits (46), Expect = 8e-20
 Identities = 67/74 (90%)
 Strand = Plus / Minus

                                                                      
Query: 8  ggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgtta 67
          |||| |||||||||||||||||||||||||||| ||| |||  | |||||||||||||||
Sbjct: 74 ggccggagctcttttcacattgtgctactgtctacacgtgtaccgagcagtgcaatgtta 15

                        
Query: 68 aaagggcattggcc 81
          ||||||||| ||||
Sbjct: 14 aaagggcatcggcc 1




>33090_rno-mir-3590:mirbase
          Length = 74

 Score = 91.7 bits (46), Expect = 8e-20
 Identities = 67/74 (90%)
 Strand = Plus / Minus

                                                                      
Query: 8  ggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgtta 67
          |||| |||||||||||||||||||||||||||| ||| |||  | |||||||||||||||
Sbjct: 74 ggccggagctcttttcacattgtgctactgtctacacgtgtaccgagcagtgcaatgtta 15

                        
Query: 68 aaagggcattggcc 81
          ||||||||| ||||
Sbjct: 14 aaagggcatcggcc 1




>31856_mmu-mir-130a:mirbase
          Length = 64

 Score = 71.9 bits (36), Expect = 7e-14
 Identities = 58/64 (90%), Gaps = 1/64 (1%)
 Strand = Plus / Plus

                                                                      
Query: 13 gagctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgttaaaagg 72
          ||||||||||||||||||||||||||||  || |||  | ||||||||||||||||||||
Sbjct: 1  gagctcttttcacattgtgctactgtct-aacgtgtaccgagcagtgcaatgttaaaagg 59

              
Query: 73 gcat 76
          ||||
Sbjct: 60 gcat 63




>25772_xtr-mir-130a:mirbase
          Length = 83

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 53 agcagtgcaatgttaaaagggcattggcc 81
          |||||||||||||||||||||||||||||
Sbjct: 51 agcagtgcaatgttaaaagggcattggcc 79




>25949_gga-mir-130c:mirbase
          Length = 94

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 53 agcagtgcaatgttaaaagggcattggcc 81
          |||||||||||||||||||||||||||||
Sbjct: 58 agcagtgcaatgttaaaagggcattggcc 86




>26461_tgu-mir-130c:mirbase
          Length = 112

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 53  agcagtgcaatgttaaaagggcattggcc 81
           |||||||||||||||||||||||||||||
Sbjct: 79  agcagtgcaatgttaaaagggcattggcc 107




>31486_oan-mir-130b:mirbase
          Length = 129

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 53  agcagtgcaatgttaaaagggcattggcc 81
           |||||||||||||||||||||||||||||
Sbjct: 79  agcagtgcaatgttaaaagggcattggcc 107




>34289_dre-mir-130a-1:mirbase
          Length = 85

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 53 agcagtgcaatgttaaaagggcattggcc 81
          |||||||||||||||||||||||||||||
Sbjct: 52 agcagtgcaatgttaaaagggcattggcc 80




>34290_dre-mir-130a-2:mirbase
          Length = 85

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 53 agcagtgcaatgttaaaagggcattggcc 81
          |||||||||||||||||||||||||||||
Sbjct: 52 agcagtgcaatgttaaaagggcattggcc 80




>25774_xtr-mir-130c:mirbase
          Length = 71

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 52 tagcagtgcaatgttaaaagggcattggc 80
          |||||||||||| ||||||||||||||||
Sbjct: 42 tagcagtgcaatattaaaagggcattggc 70




>25947_gga-mir-130a:mirbase
          Length = 83

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 53 agcagtgcaatgttaaaagggcattggc 80
          ||||||||||| ||||||||||||||||
Sbjct: 50 agcagtgcaatattaaaagggcattggc 77




>26459_tgu-mir-130a:mirbase
          Length = 72

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 53 agcagtgcaatgttaaaagggcattggc 80
          ||||||||||| ||||||||||||||||
Sbjct: 39 agcagtgcaatattaaaagggcattggc 66




>34292_dre-mir-130c-1:mirbase
          Length = 141

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 53  agcagtgcaatgttaaaagggcattggc 80
           ||||||||||| ||||||||||||||||
Sbjct: 78  agcagtgcaatattaaaagggcattggc 105




>34293_dre-mir-130c-2:mirbase
          Length = 81

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 53 agcagtgcaatgttaaaagggcattggc 80
          ||||||||||| ||||||||||||||||
Sbjct: 48 agcagtgcaatattaaaagggcattggc 75




>34595_fru-mir-130:mirbase
          Length = 79

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 53 agcagtgcaatgttaaaagggcattggc 80
          ||||||||||| ||||||||||||||||
Sbjct: 50 agcagtgcaatattaaaagggcattggc 77




>34742_tni-mir-130:mirbase
          Length = 74

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 53 agcagtgcaatgttaaaagggcattggc 80
          ||||||||||| ||||||||||||||||
Sbjct: 47 agcagtgcaatattaaaagggcattggc 74




>25480_pma-mir-130b:mirbase
          Length = 90

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 56 agtgcaatgttaaaagggcattgg 79
          |||||||||| |||||||||||||
Sbjct: 52 agtgcaatgtgaaaagggcattgg 75




>31487_oan-mir-130c:mirbase
          Length = 89

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 53 agcagtgcaatgttaaaagggcat 76
          |||||||||||| |||||||||||
Sbjct: 51 agcagtgcaatggtaaaagggcat 74