miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28448_hsa-mir-134:mirbase
Length = 73
Score = 145 bits (73), Expect = 5e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 cagggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccaccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccaccta 60
Query: 61 gtcaccaaccctc 73
|||||||||||||
Sbjct: 61 gtcaccaaccctc 73
>30092_ppa-mir-134:mirbase
Length = 73
Score = 145 bits (73), Expect = 5e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 cagggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccaccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccaccta 60
Query: 61 gtcaccaaccctc 73
|||||||||||||
Sbjct: 61 gtcaccaaccctc 73
>30833_ppy-mir-134:mirbase
Length = 73
Score = 145 bits (73), Expect = 5e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 cagggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccaccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccaccta 60
Query: 61 gtcaccaaccctc 73
|||||||||||||
Sbjct: 61 gtcaccaaccctc 73
>28305_ggo-mir-134:mirbase
Length = 73
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 2 agggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccacctag 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccacctag 61
Query: 62 tcaccaaccctc 73
||||||||||||
Sbjct: 62 tcaccaaccctc 73
>30223_ptr-mir-134:mirbase
Length = 72
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 2 agggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccacctag 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccacctag 60
Query: 62 tcaccaaccctc 73
||||||||||||
Sbjct: 61 tcaccaaccctc 72
>27734_mml-mir-134:mirbase
Length = 73
Score = 137 bits (69), Expect = 1e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 1 cagggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccaccta 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 cagggtgtgtgactggttgaccagaggggcgtgcactgtgttcaccctgtgggccaccta 60
Query: 61 gtcaccaaccctc 73
|||||||||||||
Sbjct: 61 gtcaccaaccctc 73
>26704_cfa-mir-134:mirbase
Length = 73
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 1 cagggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccaccta 60
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 1 cagggtgtgtgactggttgaccagaggggcaagcactctgttcaccctgtgggccaccta 60
Query: 61 gtcaccaaccctc 73
|||||||||||||
Sbjct: 61 gtcaccaaccctc 73
>32736_rno-mir-134:mirbase
Length = 73
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 1 cagggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccaccta 60
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 1 cagggtgtgtgactggttgaccagaggggcgtgcactttgttcaccctgtgggccaccta 60
Query: 61 gtcaccaaccctc 73
|||||||||||||
Sbjct: 61 gtcaccaaccctc 73
>27028_eca-mir-134:mirbase
Length = 71
Score = 125 bits (63), Expect = 4e-30
Identities = 69/71 (97%)
Strand = Plus / Plus
Query: 2 agggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccacctag 61
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 1 agggtgtgtgactggttgaccagaggggcaagcactctgttcaccctgtgggccacctag 60
Query: 62 tcaccaaccct 72
|||||||||||
Sbjct: 61 tcaccaaccct 71
>31862_mmu-mir-134:mirbase
Length = 71
Score = 125 bits (63), Expect = 4e-30
Identities = 69/71 (97%)
Strand = Plus / Plus
Query: 2 agggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccacctag 61
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 1 agggtgtgtgactggttgaccagaggggcgtgcactctgttcaccctgtgggccacctag 60
Query: 62 tcaccaaccct 72
|||||||||||
Sbjct: 61 tcaccaaccct 71
>33217_bta-mir-134:mirbase
Length = 73
Score = 97.6 bits (49), Expect = 1e-21
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 1 cagggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccaccta 60
|||||||||||||||||||||||||| ||| ||||| ||||||||| |||||||||||
Sbjct: 1 cagggtgtgtgactggttgaccagagtggccagcactcggttcaccctctgggccaccta 60
Query: 61 gtcaccaaccctc 73
|||||||||||||
Sbjct: 61 gtcaccaaccctc 73
>33796_oar-mir-134:mirbase
Length = 108
Score = 81.8 bits (41), Expect = 6e-17
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 1 cagggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccaccta 60
||||||||||||||||||||||||||||||| ||||| ||||||||| ||||| |||
Sbjct: 17 cagggtgtgtgactggttgaccagaggggcaagcactccgttcaccctctgggctgcctc 76
Query: 61 gtcaccaac 69
|||||||||
Sbjct: 77 gtcaccaac 85
>33797_oar-mir-134:mirbase
Length = 108
Score = 81.8 bits (41), Expect = 6e-17
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 1 cagggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccaccta 60
||||||||||||||||||||||||||||||| ||||| ||||||||| ||||| |||
Sbjct: 17 cagggtgtgtgactggttgaccagaggggcaagcactccgttcaccctctgggctgcctc 76
Query: 61 gtcaccaac 69
|||||||||
Sbjct: 77 gtcaccaac 85
