miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>27754_mml-mir-147a:mirbase
Length = 72
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 1 aatctaaagaaaacatttctgcacacacaccagactattgaagccagtgtgtggaaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatctaaagaaaacatttctgcacacacaccagactattgaagccagtgtgtggaaatgc 60
Query: 61 ttctgctacatt 72
||||||||||||
Sbjct: 61 ttctgctacatt 72
>27619_sla-mir-147:mirbase
Length = 72
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 aatctaaagaaaacatttctgcacacacaccagactattgaagccagtgtgtggaaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatctaaagaaaacatttctgcacacacaccagactattgaagccagtgtgtggaaatgc 60
Query: 61 ttctgctacatt 72
|||||| |||||
Sbjct: 61 ttctgccacatt 72
>30100_ppa-mir-147:mirbase
Length = 72
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 aatctaaagaaaacatttctgcacacacaccagactattgaagccagtgtgtggaaatgc 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 aatctaaagaaaacatttctgcacacacaccagactatggaagccagtgtgtggaaatgc 60
Query: 61 ttctgcta 68
||||||||
Sbjct: 61 ttctgcta 68
>30240_ptr-mir-147a:mirbase
Length = 72
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 aatctaaagaaaacatttctgcacacacaccagactattgaagccagtgtgtggaaatgc 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 aatctaaagaaaacatttctgcacacacaccagactatggaagccagtgtgtggaaatgc 60
Query: 61 ttctgcta 68
||||||||
Sbjct: 61 ttctgcta 68
>30853_ppy-mir-147:mirbase
Length = 72
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 aatctaaagaaaacatttctgcacacacaccagactattgaagccagtgtgtggaaatgc 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 aatctaaagaaaacatttctgcacacacaccagactatggaagccagtgtgtggaaatgc 60
Query: 61 ttctgcta 68
||||||||
Sbjct: 61 ttctgcta 68
>28469_hsa-mir-147:mirbase
Length = 72
Score = 119 bits (60), Expect = 3e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 1 aatctaaagaaaacatttctgcacacacaccagactattgaagccagtgtgtggaaatgc 60
|||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 aatctaaagacaacatttctgcacacacaccagactatggaagccagtgtgtggaaatgc 60
Query: 61 ttctgcta 68
||||||||
Sbjct: 61 ttctgcta 68
>31881_mmu-mir-147:mirbase
Length = 79
Score = 54.0 bits (27), Expect = 1e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 38 ttgaagccagtgtgtggaaatgcttctgctacatt 72
|||| ||||||||| ||||||||||||||||||||
Sbjct: 39 ttgatgccagtgtgcggaaatgcttctgctacatt 73
>32754_rno-mir-147:mirbase
Length = 79
Score = 54.0 bits (27), Expect = 1e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 38 ttgaagccagtgtgtggaaatgcttctgctacatt 72
|||| ||||||||| ||||||||||||||||||||
Sbjct: 39 ttgatgccagtgtgcggaaatgcttctgctacatt 73
>26722_cfa-mir-147:mirbase
Length = 86
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 44 ccagtgtgtggaaatgcttctgctacatt 72
|||||||| ||||||||||||||||||||
Sbjct: 50 ccagtgtgcggaaatgcttctgctacatt 78
>27396_mdo-mir-147b:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 2e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 32 agactattgaagccagtgtgtggaaatgcttctgctacatt 72
|||||| |||| |||||||| |||| |||||||||||||||
Sbjct: 36 agactactgaaaccagtgtgcggaagtgcttctgctacatt 76
>28470_hsa-mir-147b:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 44 ccagtgtgtggaaatgcttctgctacatt 72
|||||||| ||||||||||||||||||||
Sbjct: 46 ccagtgtgcggaaatgcttctgctacatt 74
>30241_ptr-mir-147b:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 44 ccagtgtgtggaaatgcttctgctacatt 72
|||||||| ||||||||||||||||||||
Sbjct: 45 ccagtgtgcggaaatgcttctgctacatt 73
>30854_ppy-mir-147b:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 44 ccagtgtgtggaaatgcttctgctacatt 72
|||||||| ||||||||||||||||||||
Sbjct: 46 ccagtgtgcggaaatgcttctgctacatt 74
>33234_bta-mir-147:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 44 ccagtgtgtggaaatgcttctgctacatt 72
|||||||| ||||||||||||||||||||
Sbjct: 46 ccagtgtgcggaaatgcttctgctacatt 74
>25969_gga-mir-147-1:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 45 cagtgtgtggaaatgcttctgctacatt 72
||||||| ||||||||||||||||||||
Sbjct: 43 cagtgtgcggaaatgcttctgctacatt 70
>25970_gga-mir-147-2:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 45 cagtgtgtggaaatgcttctgctacatt 72
||||||| ||||||||||||||||||||
Sbjct: 43 cagtgtgcggaaatgcttctgctacatt 70
>26478_tgu-mir-147:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 45 cagtgtgtggaaatgcttctgctacatt 72
||||||| ||||||||||||||||||||
Sbjct: 39 cagtgtgcggaaatgcttctgctacatt 66
>27049_eca-mir-147b:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 45 cagtgtgtggaaatgcttctgctacatt 72
||||||| |||||||||||||||||||
Sbjct: 47 cagtgtgccgaaatgcttctgctacatt 74
