miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41644_vvi-MIR394b:mirbase
          Length = 93

 Score =  184 bits (93), Expect = 1e-47
 Identities = 93/93 (100%)
 Strand = Plus / Plus

                                                                       
Query: 33  acagagtttattggcattctgtccacctcccatctcttgaaaatctctcttttctctctg 92
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   acagagtttattggcattctgtccacctcccatctcttgaaaatctctcttttctctctg 60

                                            
Query: 93  tggaggtgggcatactgccaaccaagctctgtt 125
           |||||||||||||||||||||||||||||||||
Sbjct: 61  tggaggtgggcatactgccaaccaagctctgtt 93




>41424_ptc-MIR394b:mirbase
          Length = 147

 Score =  121 bits (61), Expect = 2e-28
 Identities = 116/133 (87%), Gaps = 1/133 (0%)
 Strand = Plus / Plus

                                                                       
Query: 20  caaagggtttctcacagagtttattggcattctgtccacctcccatctcttgaaaatctc 79
           |||||||||||| |||||||||||||||||||||||||||||| |||| | |||| |   
Sbjct: 15  caaagggtttcttacagagtttattggcattctgtccacctcctatctttagaaattaga 74

                                                                       
Query: 80  tcttttctctc-tgtggaggtgggcatactgccaaccaagctctgttggactctctttgt 138
              | ||| || | ||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 75  atatctctttcatatggaggtgggcatactgccaaccgagctctgttggtctctctttgt 134

                        
Query: 139 aaaaccctcgtga 151
           |||||||||||||
Sbjct: 135 aaaaccctcgtga 147




>41423_ptc-MIR394b:mirbase
          Length = 147

 Score =  121 bits (61), Expect = 2e-28
 Identities = 116/133 (87%), Gaps = 1/133 (0%)
 Strand = Plus / Plus

                                                                       
Query: 20  caaagggtttctcacagagtttattggcattctgtccacctcccatctcttgaaaatctc 79
           |||||||||||| |||||||||||||||||||||||||||||| |||| | |||| |   
Sbjct: 15  caaagggtttcttacagagtttattggcattctgtccacctcctatctttagaaattaga 74

                                                                       
Query: 80  tcttttctctc-tgtggaggtgggcatactgccaaccaagctctgttggactctctttgt 138
              | ||| || | ||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 75  atatctctttcatatggaggtgggcatactgccaaccgagctctgttggtctctctttgt 134

                        
Query: 139 aaaaccctcgtga 151
           |||||||||||||
Sbjct: 135 aaaaccctcgtga 147




>41422_ptc-MIR394a:mirbase
          Length = 147

 Score =  103 bits (52), Expect = 4e-23
 Identities = 127/148 (85%), Gaps = 3/148 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tcatatgggtttgacaaagggtttctcacagagtttattggcattctgtccacctcccat 65
           |||| |||||||  |||||||||||| ||||||||| |||||||||||||||||||| ||
Sbjct: 1   tcatgtgggttttgcaaagggtttcttacagagttttttggcattctgtccacctcc-at 59

                                                                       
Query: 66  ctcttgaaaatctctctt-ttct-ctctgtggaggtgggcatactgccaaccaagctctg 123
           || | |||| |     || |||| || | ||||||||||||||||||||||  |||||||
Sbjct: 60  ctgtagaaactacaagttgttctactttctggaggtgggcatactgccaactgagctctg 119

                                       
Query: 124 ttggactctctttgtaaaaccctcgtga 151
           |||| |||||||||||||||||||||||
Sbjct: 120 ttggtctctctttgtaaaaccctcgtga 147




>41421_ptc-MIR394a:mirbase
          Length = 147

 Score =  103 bits (52), Expect = 4e-23
 Identities = 127/148 (85%), Gaps = 3/148 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tcatatgggtttgacaaagggtttctcacagagtttattggcattctgtccacctcccat 65
           |||| |||||||  |||||||||||| ||||||||| |||||||||||||||||||| ||
Sbjct: 1   tcatgtgggttttgcaaagggtttcttacagagttttttggcattctgtccacctcc-at 59

                                                                       
Query: 66  ctcttgaaaatctctctt-ttct-ctctgtggaggtgggcatactgccaaccaagctctg 123
           || | |||| |     || |||| || | ||||||||||||||||||||||  |||||||
Sbjct: 60  ctgtagaaactacaagttgttctactttctggaggtgggcatactgccaactgagctctg 119

                                       
Query: 124 ttggactctctttgtaaaaccctcgtga 151
           |||| |||||||||||||||||||||||
Sbjct: 120 ttggtctctctttgtaaaaccctcgtga 147




>41055_ghr-MIR394a:mirbase
          Length = 167

 Score = 73.8 bits (37), Expect = 3e-14
 Identities = 55/61 (90%)
 Strand = Plus / Plus

                                                                      
Query: 3  ctttcatatgggtttgacaaagggtttctcacagagtttattggcattctgtccacctcc 62
          |||||||  ||||||  ||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 3  ctttcatgggggtttagcaaagggcttcttacagagtttattggcattctgtccacctcc 62

           
Query: 63 c 63
          |
Sbjct: 63 c 63



 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                       
Query: 93  tggaggtgggcatactgccaaccaagctctgttggactctctttgtaaaaccctcgtgat 152
           ||||||||||||||||||||||   ||||||||||  ||||||||||||| ||| |||||
Sbjct: 105 tggaggtgggcatactgccaactgtgctctgttggcttctctttgtaaaatccttgtgat 164




>41134_tcc-MIR394a:mirbase
          Length = 120

 Score = 71.9 bits (36), Expect = 1e-13
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                      
Query: 23 agggtttctcacagagtttattggcattctgtccacctcccatc 66
          |||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 1  agggcttcttacagagtttattggcattctgtccacctcccatc 44




>41239_csi-MIR394:mirbase
          Length = 147

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                             
Query: 28 ttctcacagagtttattggcattctgtccacctcc 62
          |||| ||||||||||||||||||||||||||||||
Sbjct: 2  ttcttacagagtttattggcattctgtccacctcc 36



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 93  tggaggtgggcatactgccaaccaagctctgttgg 127
           ||||||||||||||||||||||  |||||||||||
Sbjct: 105 tggaggtgggcatactgccaactgagctctgttgg 139




>40471_gma-MIR394a:mirbase
          Length = 157

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                     
Query: 20 caaagggtttctcacagagtttattggcattctgtccacctcc 62
          ||||| ||| || ||||||||||||||||||||||||||||||
Sbjct: 16 caaagtgttgctaacagagtttattggcattctgtccacctcc 58



 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 93  tggaggtgggcatactgccaaccaagctctgttgg 127
           ||||||||||||||||| ||||  |||||||||||
Sbjct: 98  tggaggtgggcatactgtcaactgagctctgttgg 132




>40472_gma-MIR394b:mirbase
          Length = 104

 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 33 acagagtttattggcattctgtccacctcc 62
          ||||||||||||||||||||||||||||||
Sbjct: 3  acagagtttattggcattctgtccacctcc 32




>39867_aly-MIR394a:mirbase
          Length = 220

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                             
Query: 12 gggtttgacaaagggtttctcacagagtttattggcattctgtccacctcc 62
          ||||||||||||| |||||| |||||  |  ||||||||||||||||||||
Sbjct: 37 gggtttgacaaagagtttcttacagacatctttggcattctgtccacctcc 87




>42790_zma-MIR394b:mirbase
          Length = 122

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 43 ttggcattctgtccacctccc 63
          |||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctccc 41



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 93  tggaggtgggcatactgccaa 113
           |||||||||||||||||||||
Sbjct: 83  tggaggtgggcatactgccaa 103




>42789_zma-MIR394a:mirbase
          Length = 126

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 93  tggaggtgggcatactgccaa 113
           |||||||||||||||||||||
Sbjct: 87  tggaggtgggcatactgccaa 107



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 43 ttggcattctgtccacctcc 62
          ||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40




>42569_sbi-MIR394b:mirbase
          Length = 77

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 93  tggaggtgggcatactgccaa 113
           |||||||||||||||||||||
Sbjct: 53  tggaggtgggcatactgccaa 73



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 43 ttggcattctgtccacctcc 62
          ||||||||||||||||||||
Sbjct: 2  ttggcattctgtccacctcc 21




>42000_osa-MIR394:mirbase
          Length = 110

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 93  tggaggtgggcatactgccaa 113
           |||||||||||||||||||||
Sbjct: 76  tggaggtgggcatactgccaa 96



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 43 ttggcattctgtccacctcc 62
          ||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33




>41776_bdi-MIR394:mirbase
          Length = 200

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 93  tggaggtgggcatactgccaa 113
           |||||||||||||||||||||
Sbjct: 125 tggaggtgggcatactgccaa 145



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 43 ttggcattctgtccacctcc 62
          ||||||||||||||||||||
Sbjct: 53 ttggcattctgtccacctcc 72




>42568_sbi-MIR394a:mirbase
          Length = 110

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 43 ttggcattctgtccacctcc 62
          ||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40




>41645_vvi-MIR394c:mirbase
          Length = 102

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 43 ttggcattctgtccacctcc 62
          ||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcc 30




>41643_vvi-MIR394a:mirbase
          Length = 89

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 43 ttggcattctgtccacctcc 62
          ||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcc 30




>41135_tcc-MIR394b:mirbase
          Length = 125

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 43 ttggcattctgtccacctcc 62
          ||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40




>41056_ghr-MIR394b:mirbase
          Length = 165

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 43 ttggcattctgtccacctcc 62
          ||||||||||||||||||||
Sbjct: 35 ttggcattctgtccacctcc 54




>40402_ahy-MIR394:mirbase
          Length = 96

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 43 ttggcattctgtccacctcc 62
          ||||||||||||||||||||
Sbjct: 22 ttggcattctgtccacctcc 41




>40078_ath-MIR394b:mirbase
          Length = 121

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 43 ttggcattctgtccacctcc 62
          ||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 94  ggaggtgggcatactgccaa 113
           ||||||||||||||||||||
Sbjct: 88  ggaggtgggcatactgccaa 107




>40077_ath-MIR394a:mirbase
          Length = 117

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 43 ttggcattctgtccacctcc 62
          ||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33




>39868_aly-MIR394b:mirbase
          Length = 160

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 43 ttggcattctgtccacctcc 62
          ||||||||||||||||||||
Sbjct: 41 ttggcattctgtccacctcc 60