miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31014_ppy-mir-451:mirbase
Length = 72
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 1 cttgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctctt 60
Query: 61 gctatacccaga 72
||||||||||||
Sbjct: 61 gctatacccaga 72
>30382_ptr-mir-451:mirbase
Length = 71
Score = 141 bits (71), Expect = 7e-35
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 2 ttgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctcttg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctcttg 60
Query: 62 ctatacccaga 72
|||||||||||
Sbjct: 61 ctatacccaga 71
>28662_hsa-mir-451b:mirbase
Length = 68
Score = 135 bits (68), Expect = 5e-33
Identities = 68/68 (100%)
Strand = Plus / Minus
Query: 3 tgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctcttgc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 tgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctcttgc 9
Query: 63 tataccca 70
||||||||
Sbjct: 8 tataccca 1
>27913_mml-mir-451:mirbase
Length = 72
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 1 cttgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctctt 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 cttgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaagggttctctt 60
Query: 61 gctatacccaga 72
|||||| |||||
Sbjct: 61 gctatatccaga 72
>32919_rno-mir-451:mirbase
Length = 72
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 2 ttgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctcttg 61
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttgggaatggcgaggaaaccgttaccattactgagtttagtaatggtaatggttctcttg 61
Query: 62 ct 63
||
Sbjct: 62 ct 63
>26850_cfa-mir-451:mirbase
Length = 69
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 2 ttgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctcttg 61
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttggggatggcgaggaaaccgttaccattactgagtttagtaatggtaatggttctcttg 60
Query: 62 ctataccca 70
|| ||||||
Sbjct: 61 ctgtaccca 69
>32084_mmu-mir-451:mirbase
Length = 72
Score = 109 bits (55), Expect = 3e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 cttgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctctt 60
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 cttgggaatggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctctt 60
Query: 61 gct 63
|||
Sbjct: 61 gct 63
>27185_eca-mir-451:mirbase
Length = 72
Score = 103 bits (52), Expect = 2e-23
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 1 cttgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctctt 60
|||||||||| | ||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 1 cttgggaatgtcgaggaaaccgttaccattactgtgtttagtaatggtaacggttctctt 60
Query: 61 gctatacccaga 72
||| ||||||||
Sbjct: 61 gctgtacccaga 72
>33383_bta-mir-451:mirbase
Length = 71
Score = 95.6 bits (48), Expect = 4e-21
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 9 tggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctcttgctatacc 68
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 8 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttgctgcacc 67
Query: 69 caga 72
||||
Sbjct: 68 caga 71
>25862_xtr-mir-451:mirbase
Length = 62
Score = 85.7 bits (43), Expect = 4e-18
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 9 tggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctcttgct 63
|||||| ||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 4 tggcaatgaaaccgttaccattactgagtttagtaatggtaagggttctgttgct 58
>31556_oan-mir-451:mirbase
Length = 85
Score = 85.7 bits (43), Expect = 4e-18
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 9 tggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctct 59
|||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 16 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctct 66
>34102_ssc-mir-451:mirbase
Length = 65
Score = 85.7 bits (43), Expect = 4e-18
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 17 aaaccgttaccattactgagtttagtaatggtaatggttctcttgct 63
|||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 14 aaaccgttaccattactgagtttagtaatggtaacggttctcttgct 60
>26030_gga-mir-451:mirbase
Length = 69
Score = 81.8 bits (41), Expect = 6e-17
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 9 tggcaaggaaaccgttaccattactgagtttagtaatggtaatggttct 57
||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10 tggcagggaaaccgttaccattactgagtttagtaatggtaacggttct 58
>26532_tgu-mir-451:mirbase
Length = 73
Score = 77.8 bits (39), Expect = 9e-16
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 15 ggaaaccgttaccattactgagtttagtaatggtaatggttct 57
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9 ggaaaccgttaccattactgagtttagtaatggtaacggttct 51
>34473_dre-mir-451:mirbase
Length = 60
Score = 75.8 bits (38), Expect = 4e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 16 gaaaccgttaccattactgagtttagtaatggtaatggttct 57
||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10 gaaaccgttaccattactgagtttagtaatggtaagggttct 51
>27452_mdo-mir-451:mirbase
Length = 62
Score = 71.9 bits (36), Expect = 6e-14
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 15 ggaaaccgttaccattactgagtttagtaatggtaatggttctc 58
|||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 8 ggaaaccgttaccattactgtgtttagtaatggtaagggttctc 51
