miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28661_hsa-mir-451:mirbase
Length = 72
Score = 135 bits (68), Expect = 4e-33
Identities = 68/68 (100%)
Strand = Plus / Minus
Query: 1 tgggtatagcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tgggtatagcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgc 11
Query: 61 cattccca 68
||||||||
Sbjct: 10 cattccca 3
>30382_ptr-mir-451:mirbase
Length = 71
Score = 135 bits (68), Expect = 4e-33
Identities = 68/68 (100%)
Strand = Plus / Minus
Query: 1 tgggtatagcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 tgggtatagcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgc 10
Query: 61 cattccca 68
||||||||
Sbjct: 9 cattccca 2
>31014_ppy-mir-451:mirbase
Length = 72
Score = 135 bits (68), Expect = 4e-33
Identities = 68/68 (100%)
Strand = Plus / Minus
Query: 1 tgggtatagcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tgggtatagcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgc 11
Query: 61 cattccca 68
||||||||
Sbjct: 10 cattccca 3
>27913_mml-mir-451:mirbase
Length = 72
Score = 119 bits (60), Expect = 2e-28
Identities = 63/64 (98%)
Strand = Plus / Minus
Query: 5 tatagcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgccatt 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 tatagcaagagaacccttaccattactaaactcagtaatggtaacggtttccttgccatt 7
Query: 65 ccca 68
||||
Sbjct: 6 ccca 3
>32919_rno-mir-451:mirbase
Length = 72
Score = 113 bits (57), Expect = 2e-26
Identities = 60/61 (98%)
Strand = Plus / Minus
Query: 8 agcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgccattccc 67
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 63 agcaagagaaccattaccattactaaactcagtaatggtaacggtttcctcgccattccc 4
Query: 68 a 68
|
Sbjct: 3 a 3
>26850_cfa-mir-451:mirbase
Length = 69
Score = 111 bits (56), Expect = 6e-26
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 1 tgggtatagcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgc 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 69 tgggtacagcaagagaaccattaccattactaaactcagtaatggtaacggtttcctcgc 10
Query: 61 cattccca 68
||| ||||
Sbjct: 9 catcccca 2
>32084_mmu-mir-451:mirbase
Length = 72
Score = 105 bits (53), Expect = 4e-24
Identities = 59/61 (96%)
Strand = Plus / Minus
Query: 8 agcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgccattccc 67
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 63 agcaagagaaccgttaccattactaaactcagtaatggtaacggtttcctcgccattccc 4
Query: 68 a 68
|
Sbjct: 3 a 3
>27185_eca-mir-451:mirbase
Length = 72
Score = 95.6 bits (48), Expect = 4e-21
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 1 tgggtatagcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgc 60
|||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||| |
Sbjct: 70 tgggtacagcaagagaaccgttaccattactaaacacagtaatggtaacggtttcctcga 11
Query: 61 cattccca 68
||||||||
Sbjct: 10 cattccca 3
>33383_bta-mir-451:mirbase
Length = 71
Score = 93.7 bits (47), Expect = 1e-20
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 8 agcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgcca 62
|||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 62 agcaagagaaccgttaccattactaaactcagtaatggtaacggtttcctcgcca 8
>25862_xtr-mir-451:mirbase
Length = 62
Score = 85.7 bits (43), Expect = 3e-18
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 8 agcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgcca 62
||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 58 agcaacagaacccttaccattactaaactcagtaatggtaacggtttcattgcca 4
>31556_oan-mir-451:mirbase
Length = 85
Score = 85.7 bits (43), Expect = 3e-18
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 12 agagaaccattaccattactaaactcagtaatggtaacggtttccttgcca 62
|||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 66 agagaaccgttaccattactaaactcagtaatggtaacggtttcctcgcca 16
>34102_ssc-mir-451:mirbase
Length = 65
Score = 85.7 bits (43), Expect = 3e-18
Identities = 46/47 (97%)
Strand = Plus / Minus
Query: 8 agcaagagaaccattaccattactaaactcagtaatggtaacggttt 54
|||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 60 agcaagagaaccgttaccattactaaactcagtaatggtaacggttt 14
>26030_gga-mir-451:mirbase
Length = 69
Score = 81.8 bits (41), Expect = 5e-17
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 14 agaaccattaccattactaaactcagtaatggtaacggtttccttgcca 62
|||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 58 agaaccgttaccattactaaactcagtaatggtaacggtttccctgcca 10
>26532_tgu-mir-451:mirbase
Length = 73
Score = 77.8 bits (39), Expect = 8e-16
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 14 agaaccattaccattactaaactcagtaatggtaacggtttcc 56
|||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 51 agaaccgttaccattactaaactcagtaatggtaacggtttcc 9
>34473_dre-mir-451:mirbase
Length = 60
Score = 75.8 bits (38), Expect = 3e-15
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 14 agaaccattaccattactaaactcagtaatggtaacggtttc 55
|||||| |||||||||||||||||||||||||||||||||||
Sbjct: 51 agaacccttaccattactaaactcagtaatggtaacggtttc 10
>27452_mdo-mir-451:mirbase
Length = 62
Score = 71.9 bits (36), Expect = 5e-14
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 13 gagaaccattaccattactaaactcagtaatggtaacggtttcc 56
||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 51 gagaacccttaccattactaaacacagtaatggtaacggtttcc 8
