miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>28661_hsa-mir-451:mirbase
          Length = 72

 Score =  135 bits (68), Expect = 4e-33
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                      
Query: 1  tgggtatagcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tgggtatagcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgc 11

                  
Query: 61 cattccca 68
          ||||||||
Sbjct: 10 cattccca 3




>30382_ptr-mir-451:mirbase
          Length = 71

 Score =  135 bits (68), Expect = 4e-33
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                      
Query: 1  tgggtatagcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 tgggtatagcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgc 10

                  
Query: 61 cattccca 68
          ||||||||
Sbjct: 9  cattccca 2




>31014_ppy-mir-451:mirbase
          Length = 72

 Score =  135 bits (68), Expect = 4e-33
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                      
Query: 1  tgggtatagcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tgggtatagcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgc 11

                  
Query: 61 cattccca 68
          ||||||||
Sbjct: 10 cattccca 3




>27913_mml-mir-451:mirbase
          Length = 72

 Score =  119 bits (60), Expect = 2e-28
 Identities = 63/64 (98%)
 Strand = Plus / Minus

                                                                      
Query: 5  tatagcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgccatt 64
          ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 tatagcaagagaacccttaccattactaaactcagtaatggtaacggtttccttgccatt 7

              
Query: 65 ccca 68
          ||||
Sbjct: 6  ccca 3




>32919_rno-mir-451:mirbase
          Length = 72

 Score =  113 bits (57), Expect = 2e-26
 Identities = 60/61 (98%)
 Strand = Plus / Minus

                                                                      
Query: 8  agcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgccattccc 67
          |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 63 agcaagagaaccattaccattactaaactcagtaatggtaacggtttcctcgccattccc 4

           
Query: 68 a 68
          |
Sbjct: 3  a 3




>26850_cfa-mir-451:mirbase
          Length = 69

 Score =  111 bits (56), Expect = 6e-26
 Identities = 65/68 (95%)
 Strand = Plus / Minus

                                                                      
Query: 1  tgggtatagcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgc 60
          |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 69 tgggtacagcaagagaaccattaccattactaaactcagtaatggtaacggtttcctcgc 10

                  
Query: 61 cattccca 68
          ||| ||||
Sbjct: 9  catcccca 2




>32084_mmu-mir-451:mirbase
          Length = 72

 Score =  105 bits (53), Expect = 4e-24
 Identities = 59/61 (96%)
 Strand = Plus / Minus

                                                                      
Query: 8  agcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgccattccc 67
          |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 63 agcaagagaaccgttaccattactaaactcagtaatggtaacggtttcctcgccattccc 4

           
Query: 68 a 68
          |
Sbjct: 3  a 3




>27185_eca-mir-451:mirbase
          Length = 72

 Score = 95.6 bits (48), Expect = 4e-21
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                      
Query: 1  tgggtatagcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgc 60
          |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||| | 
Sbjct: 70 tgggtacagcaagagaaccgttaccattactaaacacagtaatggtaacggtttcctcga 11

                  
Query: 61 cattccca 68
          ||||||||
Sbjct: 10 cattccca 3




>33383_bta-mir-451:mirbase
          Length = 71

 Score = 93.7 bits (47), Expect = 1e-20
 Identities = 53/55 (96%)
 Strand = Plus / Minus

                                                                 
Query: 8  agcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgcca 62
          |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 62 agcaagagaaccgttaccattactaaactcagtaatggtaacggtttcctcgcca 8




>25862_xtr-mir-451:mirbase
          Length = 62

 Score = 85.7 bits (43), Expect = 3e-18
 Identities = 52/55 (94%)
 Strand = Plus / Minus

                                                                 
Query: 8  agcaagagaaccattaccattactaaactcagtaatggtaacggtttccttgcca 62
          ||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 58 agcaacagaacccttaccattactaaactcagtaatggtaacggtttcattgcca 4




>31556_oan-mir-451:mirbase
          Length = 85

 Score = 85.7 bits (43), Expect = 3e-18
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                             
Query: 12 agagaaccattaccattactaaactcagtaatggtaacggtttccttgcca 62
          |||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 66 agagaaccgttaccattactaaactcagtaatggtaacggtttcctcgcca 16




>34102_ssc-mir-451:mirbase
          Length = 65

 Score = 85.7 bits (43), Expect = 3e-18
 Identities = 46/47 (97%)
 Strand = Plus / Minus

                                                         
Query: 8  agcaagagaaccattaccattactaaactcagtaatggtaacggttt 54
          |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 60 agcaagagaaccgttaccattactaaactcagtaatggtaacggttt 14




>26030_gga-mir-451:mirbase
          Length = 69

 Score = 81.8 bits (41), Expect = 5e-17
 Identities = 47/49 (95%)
 Strand = Plus / Minus

                                                           
Query: 14 agaaccattaccattactaaactcagtaatggtaacggtttccttgcca 62
          |||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 58 agaaccgttaccattactaaactcagtaatggtaacggtttccctgcca 10




>26532_tgu-mir-451:mirbase
          Length = 73

 Score = 77.8 bits (39), Expect = 8e-16
 Identities = 42/43 (97%)
 Strand = Plus / Minus

                                                     
Query: 14 agaaccattaccattactaaactcagtaatggtaacggtttcc 56
          |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 51 agaaccgttaccattactaaactcagtaatggtaacggtttcc 9




>34473_dre-mir-451:mirbase
          Length = 60

 Score = 75.8 bits (38), Expect = 3e-15
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                    
Query: 14 agaaccattaccattactaaactcagtaatggtaacggtttc 55
          |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 51 agaacccttaccattactaaactcagtaatggtaacggtttc 10




>27452_mdo-mir-451:mirbase
          Length = 62

 Score = 71.9 bits (36), Expect = 5e-14
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                      
Query: 13 gagaaccattaccattactaaactcagtaatggtaacggtttcc 56
          ||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 51 gagaacccttaccattactaaacacagtaatggtaacggtttcc 8