miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28668_hsa-mir-483:mirbase
Length = 76
Score = 151 bits (76), Expect = 8e-38
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 1 gagggggaagacgggaggaaagaagggagtggttccatcacgcctcctcactcctctcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagggggaagacgggaggaaagaagggagtggttccatcacgcctcctcactcctctcct 60
Query: 61 cccgtcttctcctctc 76
||||||||||||||||
Sbjct: 61 cccgtcttctcctctc 76
>33388_bta-mir-483:mirbase
Length = 68
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 44 ctcctcactcctctcctcccgtcttctcct 73
||||||||||||||||||||||||||||||
Sbjct: 39 ctcctcactcctctcctcccgtcttctcct 68
>32172_mmu-mir-483:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1 gagggggaagacgggaggaaagaagggagtggtt 34
||||||||||||||||| | ||||||||||||||
Sbjct: 1 gagggggaagacgggagaagagaagggagtggtt 34
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 46 cctcactcctctcctcccgtctt 68
||||||||||| |||||||||||
Sbjct: 43 cctcactcctcccctcccgtctt 65
>32928_rno-mir-483:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1 gagggggaagacgggaggaaagaagggagtggtt 34
||||||||||||||||| | ||||||||||||||
Sbjct: 1 gagggggaagacgggagaagagaagggagtggtt 34
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 46 cctcactcctctcctcccgtctt 68
||||||||||| |||||||||||
Sbjct: 43 cctcactcctcccctcccgtctt 65
>26854_cfa-mir-483:mirbase
Length = 69
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 45 tcctcactcctctcctcccgtcttc 69
|||||||||||| ||||||||||||
Sbjct: 38 tcctcactcctcccctcccgtcttc 62
