miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41307_ptc-MIR160c:mirbase
          Length = 98

 Score =  107 bits (54), Expect = 1e-24
 Identities = 79/86 (91%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                      
Query: 10 tgcctggctccctgtatgccattttcagagcccatcggtatttccaatggcctccgtgga 69
          |||||||||||||||||||||||| ||||||||| ||||  ||| | |||||||||||||
Sbjct: 11 tgcctggctccctgtatgccatttgcagagcccaccggttcttcga-tggcctccgtgga 69

                                    
Query: 70 tggcgtatgaggagccaagcatattc 95
          ||||||||||||||||| ||||||||
Sbjct: 70 tggcgtatgaggagccatgcatattc 95




>41306_ptc-MIR160b:mirbase
          Length = 98

 Score = 99.6 bits (50), Expect = 4e-22
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                      
Query: 10 tgcctggctccctgtatgccattttcagagcccatcggtatttccaatggcctccgtgga 69
          |||||||||||||||||||||||| ||||||||| ||| ||   | ||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccatttgcagagcccaacgg-atcctcgatggcctccgtgga 69

                                    
Query: 70 tggcgtatgaggagccaagcatattc 95
          ||||||||||||||||| ||||||||
Sbjct: 70 tggcgtatgaggagccatgcatattc 95




>41577_vvi-MIR160e:mirbase
          Length = 102

 Score = 95.6 bits (48), Expect = 6e-21
 Identities = 79/88 (89%), Gaps = 1/88 (1%)
 Strand = Plus / Plus

                                                                      
Query: 6  tatatgcctggctccctgtatgccattttcagagcccatcggtatttccaatggcctccg 65
          |||||||||||||||||||||||||||| ||||||||| ||| |  | | ||||||| ||
Sbjct: 7  tatatgcctggctccctgtatgccatttgcagagcccaccggcacat-cgatggccttcg 65

                                      
Query: 66 tggatggcgtatgaggagccaagcatat 93
          ||||||||||||||||||||| ||||||
Sbjct: 66 tggatggcgtatgaggagccatgcatat 93




>41219_csi-MIR160:mirbase
          Length = 143

 Score = 87.7 bits (44), Expect = 1e-18
 Identities = 78/88 (88%), Gaps = 1/88 (1%)
 Strand = Plus / Plus

                                                                       
Query: 10  tgcctggctccctgtatgccattttcagagcccatcggtatttccaatggcctccgtgga 69
           |||||||||||||||||||||||| ||||| | ||||  |  || | |||||||||||||
Sbjct: 33  tgcctggctccctgtatgccatttgcagagtcaatcgaaacatcga-tggcctccgtgga 91

                                       
Query: 70  tggcgtatgaggagccaagcatattcca 97
           ||||||||||||||||| ||||||||||
Sbjct: 92  tggcgtatgaggagccatgcatattcca 119




>40019_ath-MIR160a:mirbase
          Length = 85

 Score = 81.8 bits (41), Expect = 8e-17
 Identities = 77/87 (88%), Gaps = 4/87 (4%)
 Strand = Plus / Plus

                                                                      
Query: 8  tatgcctggctccctgtatgccattttcagagcccatcg-gtatttccaatggcctccgt 66
          |||||||||||||||||||||||| | | |||||||||| ||||   | ||| |||||||
Sbjct: 2  tatgcctggctccctgtatgccatatgctgagcccatcgagtat---cgatgacctccgt 58

                                     
Query: 67 ggatggcgtatgaggagccaagcatat 93
          |||||||||||||||||||| ||||||
Sbjct: 59 ggatggcgtatgaggagccatgcatat 85




>39807_aly-MIR160a:mirbase
          Length = 158

 Score = 73.8 bits (37), Expect = 2e-14
 Identities = 76/87 (87%), Gaps = 4/87 (4%)
 Strand = Plus / Plus

                                                                       
Query: 8   tatgcctggctccctgtatgccattttcagagcccatcg-gtatttccaatggcctccgt 66
           |||||||||||||||||||||||| | | |||| ||||| ||||   | ||| |||||||
Sbjct: 40  tatgcctggctccctgtatgccatatgctgagctcatcgagtat---cgatgacctccgt 96

                                      
Query: 67  ggatggcgtatgaggagccaagcatat 93
           |||||||||||||||||||| ||||||
Sbjct: 97  ggatggcgtatgaggagccatgcatat 123




>40436_gma-MIR160:mirbase
          Length = 119

 Score = 69.9 bits (35), Expect = 3e-13
 Identities = 79/92 (85%), Gaps = 5/92 (5%)
 Strand = Plus / Plus

                                                                       
Query: 5   gtatatgcctggctccctgtatgccattttcagagcccatcg--gtatttccaatggcct 62
           |||| ||||||||||||||||||||||||  ||||| |||||  | ||   ||||| |||
Sbjct: 16  gtatgtgcctggctccctgtatgccatttgtagagctcatcgaagcat---caatgacct 72

                                           
Query: 63  ccgtggatggcgtatgaggagccaagcatatt 94
             ||||||||||||||||||||||||||||||
Sbjct: 73  ttgtggatggcgtatgaggagccaagcatatt 104




>40662_mtr-MIR160e:mirbase
          Length = 91

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 65 gtggatggcgtatgaggagccaagcatattcc 96
          ||||||||||||||||||||||||||||||||
Sbjct: 60 gtggatggcgtatgaggagccaagcatattcc 91




>40659_mtr-MIR160b:mirbase
          Length = 91

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 65 gtggatggcgtatgaggagccaagcatattcc 96
          ||||||||||||||||||||||||||||||||
Sbjct: 60 gtggatggcgtatgaggagccaagcatattcc 91




>41529_sly-MIR160a:mirbase
          Length = 129

 Score = 61.9 bits (31), Expect = 8e-11
 Identities = 79/94 (84%), Gaps = 2/94 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gtatatgcctggctccctgtatgccattttcagagcccatcg--gtatttccaatggcct 62
           ||||||||||||||||||||||||||||| || ||| || ||   ||| || |  |||||
Sbjct: 15  gtatatgcctggctccctgtatgccatttgcaaagctcaccgtaatatatcgatgggcct 74

                                             
Query: 63  ccgtggatggcgtatgaggagccaagcatattcc 96
              || ||||||||||||||||||||||||||||
Sbjct: 75  tgttgaatggcgtatgaggagccaagcatattcc 108




>41088_tcc-MIR160b:mirbase
          Length = 120

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                
Query: 8  tatgcctggctccctgtatgccattttcagagcccatc 45
          |||||||||||||||||||||||||| || ||||||||
Sbjct: 19 tatgcctggctccctgtatgccatttgcaaagcccatc 56




>40312_bra-MIR160a:mirbase
          Length = 127

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 60  cctccgtggatggcgtatgaggagccaagcatatt 94
           |||||||| |||||||||||||||||| |||||||
Sbjct: 74  cctccgtgaatggcgtatgaggagccatgcatatt 108



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 8  tatgcctggctccctgtatgccat 31
          ||||||||||||||||||||||||
Sbjct: 24 tatgcctggctccctgtatgccat 47




>41576_vvi-MIR160d:mirbase
          Length = 102

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 9  atgcctggctccctgtatgccattt 33
          |||||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgccattt 34




>42705_zma-MIR160e:mirbase
          Length = 94

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 7  atatgcctggctccctgtatgcca 30
          ||||||||||||||||||||||||
Sbjct: 6  atatgcctggctccctgtatgcca 29




>42704_zma-MIR160d:mirbase
          Length = 142

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 7  atatgcctggctccctgtatgcca 30
          ||||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcca 41




>42636_tae-MIR160:mirbase
          Length = 148

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 7  atatgcctggctccctgtatgcca 30
          ||||||||||||||||||||||||
Sbjct: 19 atatgcctggctccctgtatgcca 42




>41926_osa-MIR160d:mirbase
          Length = 142

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 7  atatgcctggctccctgtatgcca 30
          ||||||||||||||||||||||||
Sbjct: 5  atatgcctggctccctgtatgcca 28




>41731_bdi-MIR160a:mirbase
          Length = 175

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 7  atatgcctggctccctgtatgcca 30
          ||||||||||||||||||||||||
Sbjct: 29 atatgcctggctccctgtatgcca 52




>41166_aqc-MIR160b:mirbase
          Length = 82

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 10 tgcctggctccctgtatgccattt 33
          ||||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccattt 24




>40661_mtr-MIR160d:mirbase
          Length = 91

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 10 tgcctggctccctgtatgccattt 33
          ||||||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgccattt 29




>40658_mtr-MIR160:mirbase
          Length = 119

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 10 tgcctggctccctgtatgccattt 33
          ||||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccattt 44




>40339_rco-MIR160a:mirbase
          Length = 92

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 10 tgcctggctccctgtatgccattt 33
          ||||||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgccattt 29




>42706_zma-MIR160f:mirbase
          Length = 116

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 7  atatgcctggctccctgtatgcc 29
          |||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcc 40




>41927_osa-MIR160e:mirbase
          Length = 114

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 7  atatgcctggctccctgtatgcc 29
          |||||||||||||||||||||||
Sbjct: 8  atatgcctggctccctgtatgcc 30




>41308_ptc-MIR160d:mirbase
          Length = 103

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 8  tatgcctggctccctgtatgcca 30
          |||||||||||||||||||||||
Sbjct: 9  tatgcctggctccctgtatgcca 31




>41305_ptc-MIR160a:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 8  tatgcctggctccctgtatgcca 30
          |||||||||||||||||||||||
Sbjct: 9  tatgcctggctccctgtatgcca 31




>40340_rco-MIR160b:mirbase
          Length = 96

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 8  tatgcctggctccctgtatgcca 30
          |||||||||||||||||||||||
Sbjct: 4  tatgcctggctccctgtatgcca 26




>40021_ath-MIR160c:mirbase
          Length = 89

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 8  tatgcctggctccctgtatgcca 30
          |||||||||||||||||||||||
Sbjct: 3  tatgcctggctccctgtatgcca 25




>39809_aly-MIR160c:mirbase
          Length = 119

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 8  tatgcctggctccctgtatgcca 30
          |||||||||||||||||||||||
Sbjct: 22 tatgcctggctccctgtatgcca 44




>42707_zma-MIR160g:mirbase
          Length = 86

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  atgcctggctccctgtatgcca 30
          ||||||||||||||||||||||
Sbjct: 1  atgcctggctccctgtatgcca 22




>41869_far-MIR160:mirbase
          Length = 148

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  atgcctggctccctgtatgcca 30
          ||||||||||||||||||||||
Sbjct: 52 atgcctggctccctgtatgcca 73




>39731_smo-MIR160a:mirbase
          Length = 106

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 tgcctggctccctgtatgccat 31
          ||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32




>39375_pab-MIR160b:mirbase
          Length = 116

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 tgcctggctccctgtatgccat 31
          ||||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgccat 41




>42703_zma-MIR160c:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 7  tgcctggctccctgtatgcca 27




>42702_zma-MIR160b:mirbase
          Length = 121

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41




>42701_zma-MIR160a:mirbase
          Length = 104

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30




>42677_ttu-MIR160:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 9  tgcctggctccctgtatgcca 29




>42500_sbi-MIR160e:mirbase
          Length = 95

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42499_sbi-MIR160d:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42498_sbi-MIR160c:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42497_sbi-MIR160b:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42496_sbi-MIR160a:mirbase
          Length = 84

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>41925_osa-MIR160c:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 7  tgcctggctccctgtatgcca 27




>41924_osa-MIR160b:mirbase
          Length = 139

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50




>41923_osa-MIR160a:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 4  tgcctggctccctgtatgcca 24




>41734_bdi-MIR160d:mirbase
          Length = 150

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51




>41733_bdi-MIR160c:mirbase
          Length = 148

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51




>41732_bdi-MIR160b:mirbase
          Length = 146

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51




>41575_vvi-MIR160c:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>40020_ath-MIR160b:mirbase
          Length = 89

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 5  tgcctggctccctgtatgcca 25




>39808_aly-MIR160b:mirbase
          Length = 125

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41




>39732_smo-MIR160b:mirbase
          Length = 108

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33




>39460_ppt-MIR160f:mirbase
          Length = 138

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50




>39459_ppt-MIR160e:mirbase
          Length = 138

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50




>39455_ppt-MIR160a:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>39374_pab-MIR160a:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tgcctggctccctgtatgcca 30
          |||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgcca 34