miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42680_zma-MIR156c:mirbase
          Length = 139

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 6  gaaagctgacagaagagagtgagca 30
          |||||||||||||||||||||||||
Sbjct: 15 gaaagctgacagaagagagtgagca 39




>40003_ath-MIR156b:mirbase
          Length = 183

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 5  agaaagctgacagaagagagtgagcatatgca 36
          ||||| |||||||||||||||||||| |||||
Sbjct: 40 agaaaactgacagaagagagtgagcacatgca 71




>39791_aly-MIR156b:mirbase
          Length = 109

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 5  agaaagctgacagaagagagtgagcatatgca 36
          ||||| |||||||||||||||||||| |||||
Sbjct: 6  agaaaactgacagaagagagtgagcacatgca 37




>41564_vvi-MIR156d:mirbase
          Length = 103

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 11 ctgacagaagagagtgagcatatgca 36
          |||||||||||||||||||| |||||
Sbjct: 10 ctgacagaagagagtgagcacatgca 35




>40425_gma-MIR156a:mirbase
          Length = 122

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 10 gctgacagaagagagtgagcatatgc 35
          ||||||||||||||||||||| ||||
Sbjct: 19 gctgacagaagagagtgagcacatgc 44




>42684_zma-MIR156g:mirbase
          Length = 121

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 gctgacagaagagagtgagca 30
          |||||||||||||||||||||
Sbjct: 2  gctgacagaagagagtgagca 22



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 81  gtgctcacttctcttgctgtcagct 105
           ||||||||||||||| |||||||||
Sbjct: 97  gtgctcacttctctttctgtcagct 121




>42683_zma-MIR156f:mirbase
          Length = 167

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 gctgacagaagagagtgagca 30
          |||||||||||||||||||||
Sbjct: 19 gctgacagaagagagtgagca 39



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 81  gtgctcacttctcttgctgtcagct 105
           ||||||||||||||| |||||||||
Sbjct: 129 gtgctcacttctctttctgtcagct 153




>42633_tae-MIR156:mirbase
          Length = 278

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 10  gctgacagaagagagtgagca 30
           |||||||||||||||||||||
Sbjct: 94  gctgacagaagagagtgagca 114




>42490_sbi-MIR156f:mirbase
          Length = 128

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 gctgacagaagagagtgagca 30
          |||||||||||||||||||||
Sbjct: 1  gctgacagaagagagtgagca 21



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 81  gtgctcacttctcttgctgtcagct 105
           ||||||||||||||| |||||||||
Sbjct: 103 gtgctcacttctctttctgtcagct 127




>42467_ssp-MIR156:mirbase
          Length = 543

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 gctgacagaagagagtgagca 30
          |||||||||||||||||||||
Sbjct: 3  gctgacagaagagagtgagca 23




>42451_sof-MIR156:mirbase
          Length = 137

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 gctgacagaagagagtgagca 30
          |||||||||||||||||||||
Sbjct: 19 gctgacagaagagagtgagca 39




>41915_osa-MIR156l:mirbase
          Length = 156

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 gacagaagagagtgagcatat 33
          |||||||||||||||||||||
Sbjct: 12 gacagaagagagtgagcatat 32



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 80  tgtgctcacttctcttgctgtcagc 104
           |||||||||||||||| ||||||||
Sbjct: 124 tgtgctcacttctctttctgtcagc 148




>41910_osa-MIR156g:mirbase
          Length = 116

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 gctgacagaagagagtgagca 30
          |||||||||||||||||||||
Sbjct: 2  gctgacagaagagagtgagca 22




>41909_osa-MIR156f:mirbase
          Length = 186

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 81  gtgctcacttctcttgctgtcagct 105
           ||||||||||||||| |||||||||
Sbjct: 162 gtgctcacttctctttctgtcagct 186




>41906_osa-MIR156c:mirbase
          Length = 149

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 gctgacagaagagagtgagca 30
          |||||||||||||||||||||
Sbjct: 27 gctgacagaagagagtgagca 47




>41562_vvi-MIR156b:mirbase
          Length = 102

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 6  gaaagctgacagaagagagtgagca 30
          |||| ||||||||||||||||||||
Sbjct: 5  gaaaactgacagaagagagtgagca 29




>41086_tcc-MIR156g:mirbase
          Length = 120

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 81  gtgctcacttctcttgctgtcagct 105
           ||||||||||||||| |||||||||
Sbjct: 79  gtgctcacttctctttctgtcagct 103




>42681_zma-MIR156d:mirbase
          Length = 119

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 81  gtgctcacttctcttgctgtcagc 104
           ||||||||||||||| ||||||||
Sbjct: 78  gtgctcacttctctttctgtcagc 101




>42678_zma-MIR156a:mirbase
          Length = 152

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ctgacagaagagagtgagca 30
          ||||||||||||||||||||
Sbjct: 17 ctgacagaagagagtgagca 36




>42493_sbi-MIR156i:mirbase
          Length = 121

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ctgacagaagagagtgagca 30
          ||||||||||||||||||||
Sbjct: 2  ctgacagaagagagtgagca 21




>41905_osa-MIR156b:mirbase
          Length = 176

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ctgacagaagagagtgagca 30
          ||||||||||||||||||||
Sbjct: 42 ctgacagaagagagtgagca 61




>41293_ptc-MIR156f:mirbase
          Length = 101

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ctgacagaagagagtgagca 30
          ||||||||||||||||||||
Sbjct: 10 ctgacagaagagagtgagca 29




>41290_ptc-MIR156c:mirbase
          Length = 100

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ctgacagaagagagtgagca 30
          ||||||||||||||||||||
Sbjct: 10 ctgacagaagagagtgagca 29




>41288_ptc-MIR156a:mirbase
          Length = 101

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ctgacagaagagagtgagca 30
          ||||||||||||||||||||
Sbjct: 10 ctgacagaagagagtgagca 29




>41277_ctr-MIR156:mirbase
          Length = 190

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ctgacagaagagagtgagca 30
          ||||||||||||||||||||
Sbjct: 34 ctgacagaagagagtgagca 53




>41217_csi-MIR156:mirbase
          Length = 103

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ctgacagaagagagtgagca 30
          ||||||||||||||||||||
Sbjct: 12 ctgacagaagagagtgagca 31




>41082_tcc-MIR156c:mirbase
          Length = 121

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ctgacagaagagagtgagca 30
          ||||||||||||||||||||
Sbjct: 20 ctgacagaagagagtgagca 39




>41045_ghr-MIR156d:mirbase
          Length = 96

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                       
Query: 78  cgtgtgctcacttctcttgctgtcagct 105
           |||||||||||||||||| |||||||||
Sbjct: 68  cgtgtgctcacttctctt-ctgtcagct 94




>40656_mtr-MIR156i:mirbase
          Length = 93

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 12 tgacagaagagagtgagcatatgc 35
          ||||||||||||||||||| ||||
Sbjct: 6  tgacagaagagagtgagcacatgc 29




>40333_rco-MIR156d:mirbase
          Length = 93

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ctgacagaagagagtgagca 30
          ||||||||||||||||||||
Sbjct: 5  ctgacagaagagagtgagca 24




>40004_ath-MIR156c:mirbase
          Length = 104

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ctgacagaagagagtgagca 30
          ||||||||||||||||||||
Sbjct: 11 ctgacagaagagagtgagca 30




>40002_ath-MIR156a:mirbase
          Length = 123

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ctgacagaagagagtgagca 30
          ||||||||||||||||||||
Sbjct: 20 ctgacagaagagagtgagca 39




>39792_aly-MIR156c:mirbase
          Length = 102

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ctgacagaagagagtgagca 30
          ||||||||||||||||||||
Sbjct: 10 ctgacagaagagagtgagca 29




>39790_aly-MIR156a:mirbase
          Length = 184

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ctgacagaagagagtgagca 30
          ||||||||||||||||||||
Sbjct: 48 ctgacagaagagagtgagca 67