miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41856_bdi-MIR5183:mirbase
          Length = 152

 Score = 67.9 bits (34), Expect = 4e-12
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 16  cctccgattctaaattgttatcaaaatattacaggtatttagagactttttaagaataga 75
           ||||||||||||||||||| || |||||||  | |||| || |   ||||||||||||| 
Sbjct: 30  cctccgattctaaattgttgtcgaaatattttatgtatctatacgttttttaagaatagc 89

                                                 
Query: 76  tacatccatatttgagcaaatttgagacaagaatttag 113
           ||| ||||||||||  |||||||||| ||||| |||||
Sbjct: 90  tacgtccatatttggacaaatttgagtcaagagtttag 127




>41811_bdi-MIR1135:mirbase
          Length = 138

 Score = 63.9 bits (32), Expect = 6e-11
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 39  aaatattacaggtatttagagactttttaagaatagatacatccatatttgagcaaattt 98
           |||||||||| |||| |||| || |||||   |||||||||||| |||||| ||||||||
Sbjct: 103 aaatattacatgtatctagacacgttttacacatagatacatccgtatttgggcaaattt 44

                   
Query: 99  gagacaag 106
           ||||||||
Sbjct: 43  gagacaag 36



 Score = 58.0 bits (29), Expect = 4e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 210 tgtctagatacatgtaatatttcgacaag 238
           |||||||||||||||||||||||||||||
Sbjct: 82  tgtctagatacatgtaatatttcgacaag 110




>41809_bdi-MIR1122:mirbase
          Length = 180

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 71  atagatacatccatatttgagcaaatttgagac 103
           |||||||||||| ||||||  ||||||||||||
Sbjct: 63  atagatacatccgtatttggacaaatttgagac 95