miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>29092_hsa-mir-1247:mirbase
          Length = 136

 Score =  268 bits (135), Expect = 1e-72
 Identities = 135/135 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccgcttgcctcgcccagcgcagccccggccgctgggcgcacccgtcccgttcgtccccgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ccgcttgcctcgcccagcgcagccccggccgctgggcgcacccgtcccgttcgtccccgg 60

                                                                       
Query: 61  acgttgctctctaccccgggaacgtcgagactggagcgcccgaactgagccaccttcgcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgttgctctctaccccgggaacgtcgagactggagcgcccgaactgagccaccttcgcg 120

                          
Query: 121 gaccccgagagcggc 135
           |||||||||||||||
Sbjct: 121 gaccccgagagcggc 135




>31307_ppy-mir-1247:mirbase
          Length = 136

 Score =  268 bits (135), Expect = 1e-72
 Identities = 135/135 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccgcttgcctcgcccagcgcagccccggccgctgggcgcacccgtcccgttcgtccccgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ccgcttgcctcgcccagcgcagccccggccgctgggcgcacccgtcccgttcgtccccgg 60

                                                                       
Query: 61  acgttgctctctaccccgggaacgtcgagactggagcgcccgaactgagccaccttcgcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgttgctctctaccccgggaacgtcgagactggagcgcccgaactgagccaccttcgcg 120

                          
Query: 121 gaccccgagagcggc 135
           |||||||||||||||
Sbjct: 121 gaccccgagagcggc 135




>32397_mmu-mir-1247:mirbase
          Length = 82

 Score =  147 bits (74), Expect = 2e-36
 Identities = 80/82 (97%)
 Strand = Plus / Plus

                                                                       
Query: 26  cggccgctgggcgcacccgtcccgttcgtccccggacgttgctctctaccccgggaacgt 85
           ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1   cggccgccgggcgcacccgtcccgttcgtccccggacgttgctctctgccccgggaacgt 60

                                 
Query: 86  cgagactggagcgcccgaactg 107
           ||||||||||||||||||||||
Sbjct: 61  cgagactggagcgcccgaactg 82