miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST 


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>29094_hsa-mir-1249:mirbase
          Length = 66

 Score = 95.6 bits (48), Expect = 3e-21
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                          
Query: 1  gggaggagggaggagatgggccaagttccctctggctggaacgccctt 48
          ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gggaggagggaggagatgggccaagttccctctggctggaacgccctt 48





>31309_ppy-mir-1249:mirbase
          Length = 66

 Score = 95.6 bits (48), Expect = 3e-21
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                          
Query: 1  gggaggagggaggagatgggccaagttccctctggctggaacgccctt 48
          ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gggaggagggaggagatgggccaagttccctctggctggaacgccctt 48





>33475_bta-mir-1249:mirbase
          Length = 65

 Score = 79.8 bits (40), Expect = 2e-16
 Identities = 46/48 (95%)
 Strand = Plus / Plus

                                                          
Query: 1  gggaggagggaggagatgggccaagttccctctggctggaacgccctt 48
          ||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 1  gggaggagggaggagatgggccacgttccctctgcctggaacgccctt 48





>32398_mmu-mir-1249:mirbase
          Length = 98

 Score = 71.9 bits (36), Expect = 5e-14
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                          
Query: 1  gggaggagggaggagatgggccaagttccctctggctggaacgccctt 48
          ||||||||||||| ||||||||||||||||| || |||||||||||||
Sbjct: 18 gggaggagggaggggatgggccaagttccctatgcctggaacgccctt 65





>33016_rno-mir-1249:mirbase
          Length = 120

 Score = 71.9 bits (36), Expect = 5e-14
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                          
Query: 1  gggaggagggaggagatgggccaagttccctctggctggaacgccctt 48
          ||||||||||||| ||||||||||||||||| || |||||||||||||
Sbjct: 29 gggaggagggaggggatgggccaagttccctatgcctggaacgccctt 76