miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>29096_hsa-mir-1251:mirbase
          Length = 70

 Score =  137 bits (69), Expect = 1e-33
 Identities = 69/69 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tggactctagctgccaaaggcgcttctccttctgaacagagcgctttgctcagccagtgt 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2  tggactctagctgccaaaggcgcttctccttctgaacagagcgctttgctcagccagtgt 61

                   
Query: 61 agacatggc 69
          |||||||||
Sbjct: 62 agacatggc 70




>31311_ppy-mir-1251:mirbase
          Length = 70

 Score =  137 bits (69), Expect = 1e-33
 Identities = 69/69 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tggactctagctgccaaaggcgcttctccttctgaacagagcgctttgctcagccagtgt 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2  tggactctagctgccaaaggcgcttctccttctgaacagagcgctttgctcagccagtgt 61

                   
Query: 61 agacatggc 69
          |||||||||
Sbjct: 62 agacatggc 70




>32399_mmu-mir-1251:mirbase
          Length = 84

 Score =  137 bits (69), Expect = 1e-33
 Identities = 69/69 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tggactctagctgccaaaggcgcttctccttctgaacagagcgctttgctcagccagtgt 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tggactctagctgccaaaggcgcttctccttctgaacagagcgctttgctcagccagtgt 70

                   
Query: 61 agacatggc 69
          |||||||||
Sbjct: 71 agacatggc 79




>33476_bta-mir-1251:mirbase
          Length = 70

 Score =  129 bits (65), Expect = 3e-31
 Identities = 68/69 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  tggactctagctgccaaaggcgcttctccttctgaacagagcgctttgctcagccagtgt 60
          ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2  tggactctagctgccaaaggcgcttctccttctgaaccgagcgctttgctcagccagtgt 61

                   
Query: 61 agacatggc 69
          |||||||||
Sbjct: 62 agacatggc 70